Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021892
(670 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 144 4e-35
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 4e-23
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 1e-18
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 80 1e-15
SB_732| Best HMM Match : AAA (HMM E-Value=0) 77 1e-14
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 77 1e-14
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 75 7e-14
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 73 2e-13
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 73 3e-13
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 71 1e-12
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 67 1e-11
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 66 3e-11
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 65 4e-11
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 44 1e-04
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 39 0.003
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 39 0.004
SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 37 0.017
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 32 0.49
SB_43492| Best HMM Match : Extensin_2 (HMM E-Value=0.34) 31 0.64
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 31 1.1
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_52472| Best HMM Match : ABC_tran (HMM E-Value=4.62428e-44) 31 1.1
SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_2668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_57266| Best HMM Match : POPLD (HMM E-Value=0.55) 29 2.6
SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72) 29 2.6
SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49) 29 2.6
SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72) 29 2.6
SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72) 29 2.6
SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27) 29 2.6
SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22) 29 2.6
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72) 29 2.6
SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082) 29 2.6
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_32960| Best HMM Match : Ribonuc_red_sm (HMM E-Value=0) 29 3.4
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 29 3.4
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 29 4.5
SB_31849| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 28 6.0
SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 6.0
SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17) 28 6.0
SB_58530| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_11522| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_49780| Best HMM Match : 7tm_1 (HMM E-Value=0.12) 28 7.9
SB_43065| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 144 bits (350), Expect = 4e-35
Identities = 68/74 (91%), Positives = 72/74 (97%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
SQLLTLMDG+K+ SHVIVMAATNRPNS+D ALRRFGRFDRE+DIGIPDATGRLEILRIHT
Sbjct: 183 SQLLTLMDGLKQRSHVIVMAATNRPNSVDVALRRFGRFDREVDIGIPDATGRLEILRIHT 242
Query: 183 KNMKLGDDVDLEQI 224
KNMKLGDDVDLEQI
Sbjct: 243 KNMKLGDDVDLEQI 256
Score = 133 bits (322), Expect = 1e-31
Identities = 66/81 (81%), Positives = 73/81 (90%)
Frame = +2
Query: 266 LCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVEVPN 445
L + L+QIREKMDLIDLED+ IDAEVL+SLAVSMD+FRYAM S+PSALRETVVEVPN
Sbjct: 247 LGDDVDLEQIREKMDLIDLEDETIDAEVLDSLAVSMDDFRYAMGVSNPSALRETVVEVPN 306
Query: 446 VTWTDIGGLEGVKRELQELVQ 508
V+W DIGGLEGVKRELQELVQ
Sbjct: 307 VSWDDIGGLEGVKRELQELVQ 327
Score = 115 bits (276), Expect = 4e-26
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
PVEHPDKFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELL
Sbjct: 329 PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 381
Score = 57.2 bits (132), Expect = 1e-08
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+Q+LT MDGM +V ++ ATNRP+ IDPA+ R GR D+ I I +PD
Sbjct: 435 NQVLTEMDGMNVKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD------------ 482
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA-ISRLCAR 275
DVDL+ +A +HG GA ++ +C R
Sbjct: 483 -----DGDVDLDYVAKVTHGFSGADLTEICQR 509
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 105 bits (251), Expect = 4e-23
Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLTLMDG++ VIV+ ATNRPN++DPALRR GRFDRE+ IG+P A RL+ILR H
Sbjct: 336 AQLLTLMDGLESRGRVIVIGATNRPNALDPALRRPGRFDREVVIGVPSAGQRLDILRAHC 395
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
K + L DVDL +A + G+VGA ++ LC
Sbjct: 396 KPINLSVDVDLTHLAEITVGYVGADLASLC 425
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +3
Query: 48 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 227
+I++AATNRP +ID AL R GR D I + PD RLEILR+HT+ L DVDL IA
Sbjct: 699 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIA 758
Query: 228 AESHGHVGA-ISRLC 269
+ + GA + LC
Sbjct: 759 EGTELYSGADLENLC 773
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P+ HP+ F + G++ RGVL YGPPGC KT L +A A+ F+S+ +L
Sbjct: 503 PLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQL 554
Score = 48.0 bits (109), Expect = 7e-06
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 LASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALR--ETV 430
LASLC +AA ++ L ++ +V + V M +F+ AM + PS + E V
Sbjct: 421 LASLCQQAAFAALKRS-----LAKNKSGNKVKSLHTVKMSDFQLAMCHTVPSTHKGMEGV 475
Query: 431 VEVPNVTWTDIGGLEGVKRELQELVQ 508
V + W D+GGLEGVK+ L++ ++
Sbjct: 476 VRLQPTRWDDVGGLEGVKQALRQAIE 501
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P+ +P+ F G+ +G+L G PG GKTLL +C +S G ++
Sbjct: 230 PLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDV 281
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 90.2 bits (214), Expect = 1e-18
Identities = 48/86 (55%), Positives = 61/86 (70%), Gaps = 4/86 (4%)
Frame = +3
Query: 9 LLTLMDGMKKSS---HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 179
LLTLMDGM S +V+V+AATNRP+++DPALRR GRFDREI+IGIP T R +IL
Sbjct: 380 LLTLMDGMHMKSTDTYVMVLAATNRPDALDPALRRPGRFDREIEIGIPSVTDRRDILVTL 439
Query: 180 TKNMKLG-DDVDLEQIAAESHGHVGA 254
KN+ D D+ +A +HG+VGA
Sbjct: 440 LKNVPHSLHDEDISSLAESAHGYVGA 465
Score = 78.6 bits (185), Expect = 4e-15
Identities = 30/52 (57%), Positives = 42/52 (80%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P++HP+ F + G++P RG+L YGPPGC KTL+A+A+A E NFI++KGPEL
Sbjct: 556 PLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIARALATESGLNFIAIKGPEL 607
Score = 66.9 bits (156), Expect = 1e-11
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT +DG++ VI +AATNRP+ ID AL R GR DR I + +P R IL IH
Sbjct: 660 TQLLTELDGVETLKDVIFIAATNRPDMIDKALMRPGRVDRLIYVPLPCWDTRRHILEIHL 719
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
+DLE + + G+ GA I+ +C
Sbjct: 720 ARTPCEGSLDLEDLVERTEGYSGAEIAAVC 749
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/53 (47%), Positives = 38/53 (71%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ +P+ F +G+ P RG+L YGP G GKT++A+A+ANE +F + GPE+L
Sbjct: 275 PLTNPELFTAYGVPPPRGILLYGPSGTGKTMIARAVANETGVHFFCINGPEVL 327
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 LASLCSEAALQQIREKMDLIDLED----DQIDAEVLNSLAVSMDNFRYAMTKSSPSALRE 424
LA+ C EA+L + + D +Q DA + L VS ++ R A PSA+RE
Sbjct: 467 LAAACKEASLYAFKRSLHNHDNGSSQSLEQRDARIKRELLVSSEDMRAAFRCVRPSAMRE 526
Query: 425 TVVEVPNVTWTDIGGLEGVKRELQELVQ 508
+EVP V W+D+GG E +KR+L+E V+
Sbjct: 527 VALEVPKVHWSDVGGNEMIKRKLKEAVE 554
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
PV+HP++F G+ G+L GPPGCGKTLLAKAIANE NFISVKGPELL
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELL 54
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
PV+HP++F G+ G+L GPPGCGKTLLAKAIANE NFISVKGPELL
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELL 54
Score = 35.9 bits (79), Expect = 0.030
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSID 89
+QLLT MDG++ HV +M ATN+P D
Sbjct: 106 NQLLTEMDGLQARKHVFIMGATNKPGIRD 134
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 77.4 bits (182), Expect = 1e-14
Identities = 37/88 (42%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLL +DG+++ ++V+++ TNR + ID AL R GR + +++IG+PD GR++IL+IHT
Sbjct: 282 NQLLAKIDGVEQLNNVLLIGMTNRRDLIDDALLRPGRLEVQVEIGLPDEEGRVQILKIHT 341
Query: 183 KNMK----LGDDVDLEQIAAESHGHVGA 254
M+ L DDVDL ++A ++ GA
Sbjct: 342 AKMRENKVLADDVDLAELATQTKNFTGA 369
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 499 TRADPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS-VKGPELL 669
TR P + DK G++ +G+L +GPPG GKTL+A+ I + GPE+L
Sbjct: 166 TRLFPADVVDKM---GLKHVKGILLFGPPGTGKTLMARQIGTMLNTREPKIISGPEVL 220
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 77.4 bits (182), Expect = 1e-14
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLL MDG S++V+V++ TNRP+ +DPAL R GRFDR+I + PD GR I ++H
Sbjct: 173 NQLLVEMDGFSSSTNVVVLSGTNRPDVLDPALLRPGRFDRQIHLPAPDIKGRCSIFKVHL 232
Query: 183 KNMKLGDDVD--LEQIAAESHGHVGA-ISRLC 269
K +K D + ++AA + G GA I+ +C
Sbjct: 233 KPIKKNVDEEKLARKMAALTPGFTGADIANVC 264
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
+++P ++ + G + +G + GPPG GKTLLAKA+A E F+S+ G E L
Sbjct: 67 LKNPQQYHELGAKIPKGAILSGPPGTGKTLLAKAVAGEAGVPFLSISGSEFL 118
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 74.5 bits (175), Expect = 7e-14
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
S LL LMDG+ V+++ ATNR ++IDPALRR GRFDRE +PD R IL IHT
Sbjct: 1011 STLLALMDGLDSRGEVVIIGATNRIDAIDPALRRPGRFDREFQFALPDRDARRSILSIHT 1070
Query: 183 KNMKLG-DDVDLEQIAAESHGHVGA-ISRLCARRQPCS 290
+ + + ++A G+ GA I LC C+
Sbjct: 1071 REWEPRLSQRFISELADYCVGYCGADIKALCTEAALCA 1108
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 630
P+ +P+ F KF + P RGVLF+GPPG GKTL+A+A+ANEC
Sbjct: 903 PLVYPEVFDKFKITPPRGVLFFGPPGTGKTLVARALANEC 942
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/84 (42%), Positives = 53/84 (63%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT +DG++ V ++AAT+RP+ IDPAL R GR D+ + IPD R E+ R +
Sbjct: 789 NQLLTQLDGVEGLKGVYILAATSRPDLIDPALLRPGRLDKCVYCPIPDQGDRREVFRALS 848
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
++ L DD+DL+ I+ H GA
Sbjct: 849 HDLPLADDIDLDSISDSCHHFTGA 872
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P + F K ++ G+L YGPPG GKTLLA +A EC NFIS+KGPELL
Sbjct: 686 PSKFAGLFAKCPLRLRGGLLLYGPPGTGKTLLAGVVAKECGLNFISIKGPELL 738
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 359 LAVSMDNFRYAMTKSSPSALRETVV-EVPNVTWTDIGGLEGVKRELQE 499
+ VS + A+T P+ALR + + ++ W ++GGL VK LQE
Sbjct: 634 VTVSNSDIEQAITGFVPAALRGVPLHQAGHLGWENVGGLGPVKGVLQE 681
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/58 (58%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +3
Query: 3 SQLLTLMDGMKKS--SHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 170
SQLL+ MD + + +HV+V+ ATNRP+S+DPALRR GRFDREI +GIPD + R I+
Sbjct: 798 SQLLSCMDDLNNNPDAHVLVIGATNRPDSLDPALRRAGRFDREISMGIPDESARARIV 855
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +1
Query: 520 HPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
HP+ F G+ P+ G L +GPPGCGKTLLA AIA E + F+ + E++
Sbjct: 698 HPEVFTTLGVTPTTGFLLHGPPGCGKTLLAHAIAGELEMPFLKLAATEIV 747
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +2
Query: 335 IDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVEVPNVTWTDIGGLEGVKREL 493
+ +E L+SL ++MD+F A+ + PSA RE VP+VTW ++G L+ V+ EL
Sbjct: 919 LTSEQLSSLCITMDDFVGALAVTQPSAKREGFATVPDVTWANVGALKDVREEL 971
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ HP+ F G++ S GVL YGPPG GKTL+AKA+A EC NF+SVKGPEL+
Sbjct: 831 PLLHPELFAA-GLRRS-GVLLYGPPGTGKTLMAKAVATECSLNFLSVKGPELI 881
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGI-PDATGRLEILRIH 179
+QLL +DG+ + V V+ ATNRP+ +DPAL R GRFD+ + +G+ D +L +L+
Sbjct: 934 AQLLAELDGLHSTCDVFVIGATNRPDLLDPALLRPGRFDKLLYLGVSEDHHAQLSVLKAL 993
Query: 180 TKNMKLGDDVDLEQIA 227
T+ D LE+ A
Sbjct: 994 TRKFTFSADFRLEEFA 1009
Score = 35.5 bits (78), Expect = 0.039
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +2
Query: 434 EVPNVTWTDIGGLEGVKRELQELVQI 511
++P+++W D+GGL+ VK E+ + +Q+
Sbjct: 805 KIPDISWKDVGGLDSVKEEILDTIQL 830
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 70.5 bits (165), Expect = 1e-12
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLL MDGM VI++A+TNR + +D AL R GRFDR I I +P R+EI +H
Sbjct: 250 NQLLVEMDGMNTLDGVIMLASTNRADILDNALLRPGRFDRHIAIDLPTLPERMEIFEVHL 309
Query: 183 KNMKLGDDVD--LEQIAAESHGHVGA-ISRLC 269
K + L +D +++A + GH GA I+ +C
Sbjct: 310 KKLTLKRSIDQYTKRLAELTPGHSGADIANIC 341
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +1
Query: 508 DPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
D ++ ++ + G + +G L GPPG GKTLLAKA+A E F+S+ G + +
Sbjct: 142 DYLKSAGRYTQLGAKIPKGALLVGPPGTGKTLLAKAVATEADVPFLSMAGSDFV 195
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ HP++F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+
Sbjct: 103 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 155
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPD 146
+L+ +DG ++ V+ ATNRP+++DPAL R GR DR+++ G+PD
Sbjct: 210 ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPD 256
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 398 KSSPSALRETVVEVPNVTWTDIGGLEGVKRELQELVQ 508
K P+ V E P+VT++DIGG + +L+E+V+
Sbjct: 65 KIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVE 101
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL +DG + V+AATNR + +DPAL R GR DR+I+ PD R IL+IH++
Sbjct: 219 ELLNQLDGFSSHHDIKVIAATNRVDILDPALLRSGRLDRKIEFPNPDQEARARILQIHSR 278
Query: 186 NMKLGDDVDLEQIAAESHGHVGAI 257
M + DV+ ++++ + GA+
Sbjct: 279 KMNVSGDVNFDELSRCTDDFNGAM 302
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ HP+ + + G++P +GV+ YG PG GKTLLAKA+AN+ A F+ V G EL+
Sbjct: 399 PLTHPELYEEMGIKPPKGVILYGQPGTGKTLLAKAVANQTSATFLRVVGSELI 451
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +3
Query: 48 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 227
+I++AATNRP +ID AL R GR D I + PD RLEILR+HT+ L DVDL IA
Sbjct: 232 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIA 291
Query: 228 AESHGHVGA-ISRLC 269
+ + GA + LC
Sbjct: 292 EGTELYSGADLENLC 306
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P+ HP+ F + G++ RGVL YGPPGC KT L +A A+ F+S+ +L
Sbjct: 32 PLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQL 83
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 422 ETVVEVPNVTWTDIGGLEGVKRELQELVQ 508
E VV + W D+GGLEGVK+ L++ ++
Sbjct: 2 EGVVRLQPTRWDDVGGLEGVKQALRQAIE 30
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
PV+HP+ F G+ +GVL YGPPG GKTLLA+A+A+ + FI V G EL+
Sbjct: 196 PVKHPELFEALGIDQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 248
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATG 155
+LL +DG + + ++ V+ ATNR + +D AL R GR DR+I+ P+ G
Sbjct: 317 ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEG 366
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ H + + + G+ P RGVL YGPPGCGKT+LAKA+A+ A FI V G E +
Sbjct: 183 PLTHFELYKQIGIDPPRGVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 235
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL MDG ++ +V V+ ATNR +++DPAL R GR DR+I+ +PD + I T
Sbjct: 290 ELLNQMDGFDQNVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITN 349
Query: 186 NMKLGDDVDLE 218
M L ++VDLE
Sbjct: 350 KMNLSEEVDLE 360
Score = 31.1 bits (67), Expect = 0.85
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 335 IDAEVLN-SLAVSMDNFRYAMTKSSPSALRETVV-----EVPNVTWTDIGGLEGVKRELQ 496
ID E+L S +V++ A+ P ++ E PNV++ +IGG++ K+E++
Sbjct: 118 IDKELLKPSASVALHKHSNALVDILPPEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIR 177
Query: 497 ELVQI 511
E V++
Sbjct: 178 EAVEL 182
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P+ PD F +P RGVL GPPG GKT+LAKA+A EC F +V L
Sbjct: 269 PLLMPDYFQGI-RRPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTL 319
Score = 34.7 bits (76), Expect = 0.069
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Frame = +3
Query: 3 SQLLTLMDGMKKSS------HVIVMAATNRPNSIDPALRRFGRFDREIDIGIP 143
S+LL MDG+ SS V+V+AATN P +D ALRR R ++ I I +P
Sbjct: 372 SELLVQMDGVGGSSDDGETKQVMVLAATNFPWDLDEALRR--RLEKRIYIPLP 422
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 419 RETVVEVPNVTWTDIGGLEGVKRELQELVQIRSNIP 526
R+ + + PNV W DI L K+ L+E V + +P
Sbjct: 238 RDILQKNPNVHWADIADLHEAKKLLEEAVVLPLLMP 273
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 663
+ +P+KF + G + GVL G PG GKTLLAKA+A E F G E
Sbjct: 150 LRNPEKFKRLGGKLPTGVLLIGSPGTGKTLLAKAVAGEAGVPFFFCSGSE 199
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 SQLLTLMDGMK-KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 179
++ L M G+ + V+V+ ATN P ++D A+RR RF++ I I +P+ R ++ +H
Sbjct: 254 TEFLVQMQGVGVDNDQVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPEQAARSKMFELH 311
Query: 180 TKNMK-LGDDVDLEQIAAESHGHVGA 254
K L +++Q+ ++ G+ GA
Sbjct: 312 LGGSKTLLGAQEIKQLGQKTDGYSGA 337
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 428 VVEVPNVTWTDIGGLEGVKRELQELVQIRSNIP 526
V+E PNV W+DI GLE K L+E V + P
Sbjct: 88 VMEKPNVKWSDIAGLESAKEALKEAVILPIKFP 120
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 586 GCGKTLLAKAIANEC-QANFISVKGPELL 669
G GK+ LAKA+A E + FISV +L+
Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSSDLV 203
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P+ +P+ F G+ +G+L G PG GKTLL +C +S G ++
Sbjct: 60 PLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDV 111
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +1
Query: 559 RGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
R +LFYGPPG GKT+ AK++A ++ + G +++
Sbjct: 330 RNLLFYGPPGTGKTMFAKSLARHSGMDYAVMTGGDVV 366
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 523 PDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 627
P ++ G+ RG L YGPPGCGK+ +A+A E
Sbjct: 211 PRWYMDRGIPYRRGYLLYGPPGCGKSSFIQALAGE 245
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
S LL +DG+ S +V TN +DPAL R GR D + +I D R +++R+
Sbjct: 310 SGLLNTLDGVASSEERVVFMTTNHLKRLDPALIRPGRVDFKQEI---DWASRSQLVRMFA 366
Query: 183 K 185
+
Sbjct: 367 R 367
>SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 111 RFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQ 221
R DR+I+ +PD + I IHT+ M L +DV+LE+
Sbjct: 2 RIDRKIEFPMPDEKTKRRIFNIHTQRMTLAEDVNLEE 38
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 36.7 bits (81), Expect = 0.017
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGC 591
P+ +P+ F + G+ P +G L +GPPGC
Sbjct: 154 PLTNPELFQRVGIAPPKGCLLFGPPGC 180
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 383 RYAMTKSSPSALRETVVEVPNVTWTDIGGLEGVKRELQELVQI 511
RY + P + + N++++D+GGL REL+E++++
Sbjct: 111 RYLPREVDPLVYNMSHEDPGNISYSDVGGLSEQIRELREVIEL 153
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = +1
Query: 523 PDKFLKFG-----MQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
PD F+K MQ ++ G GCGKT L + +A C F
Sbjct: 1867 PDNFMKMALILQRMQAGIPIIIMGETGCGKTSLVRYLAVTCDVKF 1911
>SB_43492| Best HMM Match : Extensin_2 (HMM E-Value=0.34)
Length = 272
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -3
Query: 485 ASLPPARRCRSTSRWELPPLSHVTPTETISSLRTGSYPWRQPEN*EPLRQSDRPRG---Q 315
+ +PP R RS P+ + + PW PE P+ ++ PRG +
Sbjct: 75 SQIPPWTRARSPVDRARSPVDRARSPRGTAPEQDPPPPWTVPEQETPVDRARSPRGTAPE 134
Query: 314 *DPSSHESAARLPPSTETR 258
DP + +++PP T R
Sbjct: 135 PDPPVVQRQSQIPPWTRAR 153
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIANE 627
+LFYGPPG GKT A+A +
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQ 33
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 529 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC--QANFISVKGPEL 666
+ +K G R VL G PG GKT +A +A F S+ G E+
Sbjct: 160 EMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEI 207
>SB_52472| Best HMM Match : ABC_tran (HMM E-Value=4.62428e-44)
Length = 322
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 535 LKFGMQPSRGVLFYGPPGCGKTLLAKAIA 621
L F MQP +L GP GCGK+ L + ++
Sbjct: 86 LAFEMQPGMHLLITGPNGCGKSSLFRILS 114
>SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3133
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
D F QP + VL G PG GKT L K + N
Sbjct: 2462 DLFKSKTKQPVKRVLLEGNPGVGKTTLLKKLVN 2494
>SB_2668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 329 DQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVEVPNVTWTDIGGLEGVKRELQELV 505
D AE + V + ++ + + E + P VTW DI GLE K ++E+V
Sbjct: 17 DSGKAESITGDPVVDEKLKHLEPRMVDLIMSEIMDHGPPVTWDDIAGLEFAKNVIKEIV 75
>SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 63 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 209
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 348 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 401
>SB_57266| Best HMM Match : POPLD (HMM E-Value=0.55)
Length = 558
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = -3
Query: 533 NLSGCST----GSARVL-GVHASLPPARRCRSTSRWELPPLSHV 417
N++GC+T GS G A LPP R+C +R LPPL HV
Sbjct: 511 NMAGCNTRLIRGSTACRPGGEARLPPLRKCTQRAR-RLPPL-HV 552
>SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 516
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 63 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 209
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408
>SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)
Length = 1205
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 63 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 209
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 273 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 326
>SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 406
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 63 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 209
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 349 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 402
>SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 296
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 63 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 209
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 65 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 118
>SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27)
Length = 514
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 556 SRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
+R + GPPGCGKT L I + + GP LL
Sbjct: 390 NRLAIVQGPPGCGKTFLGVKIVQLLLSLQPQLTGPVLL 427
>SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22)
Length = 1797
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 63 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 209
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 283 STKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 336
>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2578
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 556 SRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
+R + GPPGCGKT L I + + GP LL
Sbjct: 531 NRLAIVQGPPGCGKTFLGVKIVQLLLSLQPQLTGPVLL 568
>SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 63 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 209
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 413 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 466
>SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 63 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 209
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408
>SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 63 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 209
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 283 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 336
>SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 933
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 63 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 209
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408
>SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082)
Length = 1304
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 63 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 209
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 702 STKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 755
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 568 LFYGPPGCGKTLLAKAIANECQANFISVKGPE 663
L GPPG GKT LA IA N + + +
Sbjct: 384 LLCGPPGLGKTTLAHVIAQHAGYNVVEMNASD 415
>SB_32960| Best HMM Match : Ribonuc_red_sm (HMM E-Value=0)
Length = 991
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = -3
Query: 533 NLSGCST----GSARVL-GVHASLPPARRCRSTSRWELPPLSHV 417
N++GC+T GS G A LPP R+C +R LPPL HV
Sbjct: 944 NMAGCNTWLTLGSTACRPGGEARLPPLRKCTQRAR-PLPPL-HV 985
>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
Length = 991
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 550 QPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
+P V GPP GKTL+AK +A A + V
Sbjct: 317 RPPCKVCVLGPPHSGKTLVAKQLAERYNAKVLDV 350
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 562 GVLFYGPPGCGKTLLAKAIANEC 630
GVL GP G GKT L + +A+ C
Sbjct: 120 GVLLEGPVGSGKTCLVEHVASMC 142
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
+Q VL G GCGKT + + A Q N SV
Sbjct: 1200 LQFGEPVLLVGETGCGKTTICQLFAALTQQNLFSV 1234
>SB_31849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -3
Query: 494 GVHAS-LPPARRCRS-TSRWELPPLSHVTPTETISSLRTGSY--PWRQPEN*EPLRQSDR 327
G H S +PP R RS R P + P + S R PW PE P+ +
Sbjct: 16 GHHKSQIPPWTRARSLVDRARYPRGTAPEPDPPVDSARARPPFPPWTVPEQETPVDSARS 75
Query: 326 PRGQ 315
PRGQ
Sbjct: 76 PRGQ 79
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIANE 627
VL GP GCGKT L AI E
Sbjct: 444 VLVTGPVGCGKTSLLSAILGE 464
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIA 621
+L GP G GKTLLA+ IA
Sbjct: 273 ILLLGPTGSGKTLLAQTIA 291
>SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 1021
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 225 AAESHGHVGAISRLCARRQPCSRFVRRWISLT 320
A + HG G + + RR F +RW++LT
Sbjct: 982 AGDDHGEYGPVYQQAERRDILVSFPKRWLALT 1013
>SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17)
Length = 786
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 472 GGSEA*TPRTRADPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 627
GG A P E F K P + V GPPG GK+ +A +A+E
Sbjct: 99 GGLPAKVPNFVGRESECQAVFTKLTTGPCQIVTITGPPGFGKSCVAIHVAHE 150
>SB_58530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 544 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
G+ +R + G PG GKT LAK +A IS+
Sbjct: 100 GLLNARVIFVIGGPGSGKTELAKLLAESSGRTHISM 135
>SB_11522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 419 RETVVEVPNVTWTDIGGLEGVKRELQELV 505
R+ + P+V W DI GL+ KR ++E V
Sbjct: 45 RDIYLHNPDVRWDDIIGLDAAKRLVKEAV 73
>SB_49780| Best HMM Match : 7tm_1 (HMM E-Value=0.12)
Length = 345
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 222 IAAESHGHVGAISRLCARRQPCSRFVRRWISLTSRTIRLTQRFSILWLSPWITSGT 389
+A++ H+ ++S + C R+ + L RT+ T R S+ +S WI S T
Sbjct: 24 VASKFAAHI-SVSMINMTAIACDRYFMLYFHLQYRTMVTTTRISVAIVSFWILSFT 78
>SB_43065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 317 DLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVEVPNVTWTDIGGLEGVKRELQ 496
+L+ Q+D E + + YA+ +SS L E T T +G EG++REL
Sbjct: 497 NLKQAQLDYEKAATKNEVLSKEFYALQRSSDKRLTELESRCTEQT-TKLGVYEGLERELD 555
Query: 497 ELVQIRSNI 523
+++ + I
Sbjct: 556 DVIMQAAEI 564
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 117 DREID-IGIPDATGRLEILRIHTKNMKLGDDVD 212
+RE+D G DA R E++ + TKN L DVD
Sbjct: 111 NRELDGKGTSDADLRKEVIELRTKNKTLERDVD 143
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,120,926
Number of Sequences: 59808
Number of extensions: 401960
Number of successful extensions: 1845
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1842
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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