Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021892
         (670 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.9  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    24   3.8  
AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          24   5.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.7  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   8.7  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   8.7  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   8.7  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 607 PAKFYHNQEVRRREHRAKAACRTSGICRDVRPDLHEF 497
           PA  +H+Q+V  ++      CR    C+++    H F
Sbjct: 422 PATLHHHQQVHNQQRILYCFCRNVE-CKELEKSYHTF 457


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 486 VNSKNSCRSGRTSRQIPEVRHAAFARCSLLR 578
           V ++  CR  R   Q P VRH A  R  LLR
Sbjct: 475 VANEAMCRPIRALTQAPRVRHVA-PRAGLLR 504


>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = -1

Query: 376 IHGDSQRIENLCVNLIVLEVNEIHLLTNLLQGCLRAQRREIAPT*P*DSAAICSR 212
           +HG S + +  C NL    +++ H +   L  C   Q R  A   P  S+  C +
Sbjct: 48  LHGGSMQPDGTCDNLWESFLSQFHQVRENLTAC---QERAAAGPAPDPSSQFCQQ 99


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 341 RQSDRPRGQ*DPSSHESAARLPPSTETRDSAHVT 240
           +Q    + Q  PSSH+  ++  PS++ +   H T
Sbjct: 249 QQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQT 282


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 341 RQSDRPRGQ*DPSSHESAARLPPSTETRDSAHVT 240
           +Q    + Q  PSSH+  ++  PS++ +   H T
Sbjct: 249 QQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQT 282


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 341 RQSDRPRGQ*DPSSHESAARLPPSTETRDSAHVT 240
           +Q    + Q  PSSH+  ++  PS++ +   H T
Sbjct: 201 QQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQT 234


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -1

Query: 136 PMSISRSNRPKRRSAGSMEFGRFVAAITITWD 41
           P+ + +SN        +  FG++V  +T+ +D
Sbjct: 279 PLVVKKSNNHTVLITQARSFGKYVGRLTVNFD 310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,445
Number of Sequences: 2352
Number of extensions: 13543
Number of successful extensions: 61
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)