Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021892
(670 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 150 9e-37
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 150 9e-37
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 149 1e-36
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 95 5e-20
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 93 2e-19
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 93 2e-19
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 92 4e-19
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 90 1e-18
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 89 2e-18
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 89 3e-18
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 87 8e-18
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 85 5e-17
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 81 9e-16
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 80 1e-15
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 79 2e-15
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 78 5e-15
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 76 2e-14
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 76 2e-14
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 75 3e-14
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 74 8e-14
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 73 2e-13
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 73 2e-13
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 72 3e-13
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 72 3e-13
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 72 3e-13
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 72 4e-13
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 71 5e-13
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 71 5e-13
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 71 7e-13
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 70 1e-12
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 70 1e-12
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 69 3e-12
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 69 3e-12
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 69 3e-12
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 69 4e-12
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 68 5e-12
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 66 3e-11
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 64 6e-11
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 60 1e-09
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 60 1e-09
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 60 1e-09
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 60 1e-09
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 59 3e-09
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 59 3e-09
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 58 4e-09
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 58 5e-09
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 58 5e-09
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 57 1e-08
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 55 4e-08
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 54 7e-08
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 53 2e-07
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 53 2e-07
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 53 2e-07
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 51 6e-07
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 51 6e-07
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 50 2e-06
At3g04340.1 68416.m00459 FtsH protease family protein similar to... 46 2e-05
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 41 6e-04
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 40 0.001
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 40 0.002
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 39 0.003
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 37 0.011
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 37 0.011
At2g37280.1 68415.m04573 ABC transporter family protein similar ... 37 0.011
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 37 0.011
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 37 0.014
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 37 0.014
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 36 0.018
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 36 0.018
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 36 0.018
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 36 0.018
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 36 0.024
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 36 0.032
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 36 0.032
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 36 0.032
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains... 35 0.043
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 35 0.043
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains... 35 0.043
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains... 35 0.043
At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP1... 35 0.043
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik... 35 0.043
At4g15230.1 68417.m02333 ABC transporter family protein similar ... 35 0.056
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains... 35 0.056
At1g08270.2 68414.m00912 expressed protein low similarity to SP|... 35 0.056
At1g08270.1 68414.m00913 expressed protein low similarity to SP|... 35 0.056
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 34 0.074
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 34 0.074
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains... 34 0.074
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 34 0.074
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 34 0.074
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic... 34 0.098
At1g21690.2 68414.m02715 replication factor C 37 kDa, putative S... 34 0.098
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S... 34 0.098
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 33 0.13
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 33 0.17
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 33 0.17
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 33 0.23
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 32 0.30
At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR... 32 0.40
At4g21880.1 68417.m03164 pentatricopeptide (PPR) repeat-containi... 32 0.40
At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP1... 32 0.40
At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding ... 31 0.52
At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-lik... 31 0.69
At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-lik... 31 0.69
At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-lik... 31 0.69
At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR... 31 0.69
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 31 0.69
At2g36380.1 68415.m04464 ABC transporter family protein related ... 31 0.69
At1g66950.1 68414.m07612 ABC transporter family protein similar ... 31 0.69
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR... 31 0.92
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR... 31 0.92
At4g15233.1 68417.m02334 ABC transporter family protein similar ... 31 0.92
At3g49210.1 68416.m05378 expressed protein 31 0.92
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 31 0.92
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 30 1.2
At5g25140.1 68418.m02979 cytochrome P450 family protein CYTOCHRO... 30 1.2
At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP1... 30 1.2
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 30 1.2
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 30 1.2
At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to c... 30 1.2
At5g45200.1 68418.m05548 disease resistance protein (TIR-NBS-LRR... 30 1.6
At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR... 30 1.6
At5g17890.1 68418.m02098 LIM domain-containing protein / disease... 30 1.6
At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR... 30 1.6
At3g16340.1 68416.m02066 ABC transporter family protein similar ... 30 1.6
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 30 1.6
At1g15210.1 68414.m01818 ABC transporter family protein Similar ... 30 1.6
At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ... 29 2.1
At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial (... 29 2.1
At5g27950.1 68418.m03366 kinesin motor protein-related kinesin h... 29 2.1
At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR... 29 2.1
At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR... 29 2.1
At5g63400.1 68418.m07958 adenylate kinase identical to adenylate... 29 2.8
At5g44320.1 68418.m05427 eukaryotic translation initiation facto... 29 2.8
At5g18360.1 68418.m02160 disease resistance protein (TIR-NBS-LRR... 29 2.8
At2g29940.1 68415.m03642 ABC transporter family protein similar ... 29 2.8
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 29 3.7
At5g45050.2 68418.m05524 disease resistance protein-related simi... 29 3.7
At5g45050.1 68418.m05523 disease resistance protein-related simi... 29 3.7
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr... 29 3.7
At4g26090.1 68417.m03756 disease resistance protein RPS2 (CC-NBS... 29 3.7
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 29 3.7
At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR... 29 3.7
At5g66770.1 68418.m08416 scarecrow transcription factor family p... 28 4.9
At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR... 28 4.9
At5g08260.1 68418.m00971 serine carboxypeptidase S10 family prot... 28 4.9
At4g19500.1 68417.m02868 disease resistance protein (TIR-NBS-LRR... 28 4.9
At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR... 28 4.9
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 28 4.9
At1g59870.1 68414.m06745 ABC transporter family protein similar ... 28 4.9
At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR... 28 4.9
At1g15520.1 68414.m01867 ABC transporter family protein similar ... 28 4.9
At5g67630.1 68418.m08527 DNA helicase, putative similar to RuvB-... 28 6.5
At5g66910.1 68418.m08434 disease resistance protein (CC-NBS-LRR ... 28 6.5
At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR... 28 6.5
At5g50370.1 68418.m06238 adenylate kinase, putative similar to a... 28 6.5
At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS cla... 28 6.5
At1g77470.1 68414.m09021 replication factor C 36 kDA, putative s... 28 6.5
At5g46570.1 68418.m05734 protein kinase family protein contains ... 27 8.5
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 27 8.5
At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam pr... 27 8.5
At1g73170.1 68414.m08466 expressed protein 27 8.5
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 150 bits (363), Expect = 9e-37
Identities = 69/90 (76%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
SQLLTLMDG+K +HVIVM ATNRPNSIDPALRRFGRFDREIDIG+PD GRLE+LRIHT
Sbjct: 329 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHT 388
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
KNMKL +DVDLE+I+ ++HG+VGA ++ LC
Sbjct: 389 KNMKLAEDVDLERISKDTHGYVGADLAALC 418
Score = 132 bits (319), Expect = 2e-31
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = +2
Query: 257 LASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVE 436
LA+LC+EAALQ IREKMD+IDLEDD IDAE+LNS+AVS ++F A+ S+PSALRETVVE
Sbjct: 414 LAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVE 473
Query: 437 VPNVTWTDIGGLEGVKRELQELVQ 508
VPNV+W DIGGLE VKRELQE VQ
Sbjct: 474 VPNVSWEDIGGLENVKRELQETVQ 497
Score = 111 bits (267), Expect = 4e-25
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
PVEHP+KF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL
Sbjct: 499 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 551
Score = 71.3 bits (167), Expect = 5e-13
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT MDGM V ++ ATNRP+ ID AL R GR D+ I I +PD RL I +
Sbjct: 605 NQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACL 664
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA-ISRLCAR 275
+ + DVD+ +A + G GA I+ +C R
Sbjct: 665 RKSPVAKDVDVTALAKYTQGFSGADITEICQR 696
Score = 70.1 bits (164), Expect = 1e-12
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ HP F G++P +G+L YGPPG GKTL+A+A+ANE A F + GPE++
Sbjct: 226 PLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM 278
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 150 bits (363), Expect = 9e-37
Identities = 69/90 (76%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
SQLLTLMDG+K +HVIVM ATNRPNSIDPALRRFGRFDREIDIG+PD GRLE+LRIHT
Sbjct: 329 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHT 388
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
KNMKL +DVDLE+I+ ++HG+VGA ++ LC
Sbjct: 389 KNMKLAEDVDLERISKDTHGYVGADLAALC 418
Score = 131 bits (317), Expect = 4e-31
Identities = 63/84 (75%), Positives = 74/84 (88%)
Frame = +2
Query: 257 LASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVE 436
LA+LC+EAALQ IREKMD+IDLEDD IDAE+LNS+AV+ ++F A+ S+PSALRETVVE
Sbjct: 414 LAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVE 473
Query: 437 VPNVTWTDIGGLEGVKRELQELVQ 508
VPNV+W DIGGLE VKRELQE VQ
Sbjct: 474 VPNVSWNDIGGLENVKRELQETVQ 497
Score = 111 bits (267), Expect = 4e-25
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
PVEHP+KF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL
Sbjct: 499 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 551
Score = 72.1 bits (169), Expect = 3e-13
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT MDGM V ++ ATNRP+ ID AL R GR D+ I I +PD RL I +
Sbjct: 606 NQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAAL 665
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA-ISRLCAR 275
+ + DVD+ +A + G GA I+ +C R
Sbjct: 666 RKSPIAKDVDIGALAKYTQGFSGADITEICQR 697
Score = 70.1 bits (164), Expect = 1e-12
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ HP F G++P +G+L YGPPG GKTL+A+A+ANE A F + GPE++
Sbjct: 226 PLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM 278
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 149 bits (362), Expect = 1e-36
Identities = 68/90 (75%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
SQLLTLMDG+K +HVIVM ATNRPNSIDPALRRFGRFDREIDIG+PD GRLE+LRIHT
Sbjct: 330 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHT 389
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
KNMKL +DVDLE+++ ++HG+VGA ++ LC
Sbjct: 390 KNMKLAEDVDLERVSKDTHGYVGADLAALC 419
Score = 132 bits (319), Expect = 2e-31
Identities = 63/84 (75%), Positives = 76/84 (90%)
Frame = +2
Query: 257 LASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVE 436
LA+LC+EAALQ IREKMD+IDL+D++IDAE+LNS+AVS D+F+ A+ S+PSALRETVVE
Sbjct: 415 LAALCTEAALQCIREKMDVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVE 474
Query: 437 VPNVTWTDIGGLEGVKRELQELVQ 508
VPNV+W DIGGLE VKRELQE VQ
Sbjct: 475 VPNVSWEDIGGLENVKRELQETVQ 498
Score = 111 bits (266), Expect = 5e-25
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
PVEHP+KF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELL
Sbjct: 500 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 552
Score = 74.5 bits (175), Expect = 6e-14
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT MDGM V ++ ATNRP+ IDPAL R GR D+ I I +PD R +I +
Sbjct: 606 NQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCL 665
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA-ISRLCAR 275
+ + DVDL +A + G GA I+ +C R
Sbjct: 666 RKSPVAKDVDLRALAKYTQGFSGADITEICQR 697
Score = 70.1 bits (164), Expect = 1e-12
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ HP F G++P +G+L YGPPG GKTL+A+A+ANE A F + GPE++
Sbjct: 227 PLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM 279
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 94.7 bits (225), Expect = 5e-20
Identities = 47/89 (52%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
Frame = +3
Query: 9 LLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKN 188
LL LMDG+ ++ V+V+AATNRP+SI+PALRR GR DREI+IG+P +T R +IL I +
Sbjct: 508 LLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRG 567
Query: 189 MKLG-DDVDLEQIAAESHGHVGA-ISRLC 269
M+ ++ +EQ+A +HG VGA +S LC
Sbjct: 568 MRHSLSNIQVEQLAMATHGFVGADLSALC 596
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
SQLL +DG+ + V V+AATNRP+ ID AL R GRFDR + +G P+ T R IL+IH
Sbjct: 848 SQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHL 907
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
+ + D+ L+++A+ + G+ GA IS +C
Sbjct: 908 RKIPCSSDICLKELASITKGYTGADISLIC 937
Score = 72.9 bits (171), Expect = 2e-13
Identities = 28/52 (53%), Positives = 40/52 (76%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P +H D F + G +P G+L +GPPGC KTL+A+A+A+E + NF++VKGPEL
Sbjct: 743 PQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPEL 794
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +2
Query: 353 NSLAVSMDNFRYAMTKSSPSALRETVVEVPNVTWTDIGGLEGVKRELQELVQ 508
++L+V ++F A TK PSA+RE ++EVP V W D+GG VK +L E V+
Sbjct: 690 HTLSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVE 741
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +1
Query: 544 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
G++P++GVL +GPPG GKT LA+ A NF SV GPE++
Sbjct: 414 GLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEII 455
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
S LLT MDG++++ ++V+AATNRP +ID AL R GRFD + + PD R EIL++HT
Sbjct: 412 STLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHT 471
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
+NM LGDDVDL +IA E+ GA + LC
Sbjct: 472 RNMTLGDDVDLRKIAEETDLFTGAELEGLC 501
Score = 87.8 bits (208), Expect = 6e-18
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 4/93 (4%)
Frame = +3
Query: 3 SQLLTLMDGMKKSS---HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 173
SQL TLMD K SS V+V+A+TNR ++IDPALRR GRFD +++ P+ RL+IL+
Sbjct: 147 SQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQ 206
Query: 174 IHTKNMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
++TK + L VDL+ IA +G+VGA + LC
Sbjct: 207 LYTKKVNLDPSVDLQAIAISCNGYVGADLEALC 239
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P++H F+K G+ P RG+L +GPPGC KT LAKA AN QA+F S+ EL
Sbjct: 305 PIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAEL 356
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Frame = +2
Query: 353 NSLAVSMDNFRYAMTKSSPSALRETVVEVPNVTWTDIGGLEGVKRELQELVQ 508
+SL ++ +F+ A + PS R VE+P VTW D+GGL+ +K++LQ+ V+
Sbjct: 252 DSLILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVE 303
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFI 645
P +P + G++ RG+L YGPPG GKT L +A+ EC A+ I
Sbjct: 41 PFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLI 85
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 92.7 bits (220), Expect = 2e-19
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT MDG +S VIV+AATNRP+ +D AL R GRFDR++ + PD GR++IL++H+
Sbjct: 374 NQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHS 433
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
+ +G DVD E++A + G GA
Sbjct: 434 RGKAIGKDVDYEKVARRTPGFTGA 457
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +1
Query: 508 DPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
D +++PDK+ G + +G L GPPG GKTLLA+A+A E F S E +
Sbjct: 267 DFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFV 320
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 91.9 bits (218), Expect = 4e-19
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT MDG +S VIV+AATNRP+ +D AL R GRFDR++ + PD GR++IL++H+
Sbjct: 386 NQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHS 445
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
+ LG DVD +++A + G GA
Sbjct: 446 RGKALGKDVDFDKVARRTPGFTGA 469
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +1
Query: 508 DPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
D +++PDK+ G + +G L GPPG GKTLLA+A+A E F S E +
Sbjct: 279 DFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFV 332
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 90.2 bits (214), Expect = 1e-18
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+Q+LT MDG ++ VIV+AATNRP +D AL R GRFDR++ +G+PD GR EIL++H+
Sbjct: 347 NQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVHS 406
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
++ KL DV L IA + G GA
Sbjct: 407 RSKKLDKDVSLSVIAMRTPGFSGA 430
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1
Query: 523 PDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+KF G + +GVL GPPG GKTLLAKAIA E F S+ G E +
Sbjct: 245 PEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFI 293
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 89.0 bits (211), Expect = 2e-18
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT MDG SS VIV+ ATNR + +DPALRR GRFDR + + PD GR IL++H
Sbjct: 454 NQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHV 513
Query: 183 --KNMKLGDDVDLEQIAAESHGHVGA 254
K + LGDDV+L IA+ + G GA
Sbjct: 514 SKKELPLGDDVNLASIASMTTGFTGA 539
Score = 57.6 bits (133), Expect = 7e-09
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
+++PD++++ G +P RGVL G PG GKTLLAKA+A E FIS E +
Sbjct: 348 LKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFV 399
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 88.6 bits (210), Expect = 3e-18
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT MDG +S VIV+ ATNR + +DPALRR GRFDR + + PD GR ILR+H
Sbjct: 450 NQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHV 509
Query: 183 --KNMKLGDDVDLEQIAAESHGHVGA 254
K + LGDDV+L IA+ + G GA
Sbjct: 510 SKKELPLGDDVNLGSIASMTTGFTGA 535
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
+ +P+K+++ G +P RGVL G PG GKTLLAKA+A E + FIS E +
Sbjct: 344 LRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFV 395
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 87.4 bits (207), Expect = 8e-18
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT MDG + ++ VIV+AATNR + +D AL R GRFDR++ + +PD GR +IL++H
Sbjct: 351 NQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHA 410
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
N K +DV LE IA + G GA
Sbjct: 411 GNKKFDNDVSLEIIAMRTPGFSGA 434
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
++ P++F G + +GVL GPPG GKTLLAKAIA E F S+ G E +
Sbjct: 246 LKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV 297
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 84.6 bits (200), Expect = 5e-17
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT MDG + ++ VIV+AATNR + +D AL R GRFDR++ + +PD GR +IL++H+
Sbjct: 344 NQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHS 403
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
N K V LE IA + G GA
Sbjct: 404 GNKKFESGVSLEVIAMRTPGFSGA 427
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
++ P++F G + +GVL GPPG GKTLLAKAIA E F S+ G E +
Sbjct: 239 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV 290
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 80.6 bits (190), Expect = 9e-16
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
QLL MDG +++ +IVMAATN P+ +DPAL R GRFDR I + PD GR EIL ++ +
Sbjct: 483 QLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQ 542
Query: 186 NMKLGDDVDLEQIAAESHGHVGA 254
+ +DVD++ IA + G GA
Sbjct: 543 GKPMSEDVDVKAIARGTPGFNGA 565
Score = 47.6 bits (108), Expect = 7e-06
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 663
+++P KF + G + +G+L G PG GKTLLAKAIA E F G E
Sbjct: 381 LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSE 430
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 80.2 bits (189), Expect = 1e-15
Identities = 38/84 (45%), Positives = 56/84 (66%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLL +DG + VI +A+TNRP+ +DPAL R GRFDR+I I P GR+EIL++H
Sbjct: 534 NQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILQVHA 593
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
+ + +D+D +A+ + G VGA
Sbjct: 594 RKKPMAEDLDYMAVASMTDGMVGA 617
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +1
Query: 520 HPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
H + + + G++ G+L GPPG GKTLLAKA+A E NF S+ + +
Sbjct: 431 HGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFV 480
>At4g23940.1 68417.m03443 FtsH protease, putative contains
similarity to zinc dependent protease GI:7650138 from
[Arabidopsis thaliana]
Length = 946
Score = 79.4 bits (187), Expect = 2e-15
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLL +DG VI + ATNR + +DPAL R GRFDR+I + P+A GRL+IL+IH
Sbjct: 562 NQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLDILKIHA 621
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
+K+ D VDL A+ G GA
Sbjct: 622 SKVKMSDSVDLSSYASNLPGWSGA 645
Score = 60.9 bits (141), Expect = 7e-10
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
+++PD F K G++P GVL GPPGCGKTL+AKAIA E F + G E +
Sbjct: 449 LKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFV 500
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 78.2 bits (184), Expect = 5e-15
Identities = 37/88 (42%), Positives = 62/88 (70%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT +DG++ ++V+++ TNR + +D AL R GR + +++I +PD GRL+IL+IHT
Sbjct: 349 NQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHT 408
Query: 183 KNMK----LGDDVDLEQIAAESHGHVGA 254
MK LG D++L+++AA + + GA
Sbjct: 409 NKMKENSFLGTDINLQELAARTKNYSGA 436
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 496 RTRADPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS-VKGPELL 669
R A V P + G++ +G+L +GPPG GKTL+A+ I V GPE+L
Sbjct: 230 RAFASRVFPPHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVL 288
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 76.2 bits (179), Expect = 2e-14
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
S LL L+DG+K V+V+ ATN P++IDPALRR GRFDREI +P R I+ +HT
Sbjct: 846 STLLALLDGLKSRGSVVVIGATNYPDAIDPALRRPGRFDREIYFPLPSVDDRAAIISLHT 905
Query: 183 KNM-KLGDDVDLEQIAAESHGHVGA-ISRLCAR 275
+ K L+ IA E+ G GA I LC +
Sbjct: 906 RKWPKPVSGYLLKWIAKETAGFAGADIQALCTQ 938
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAI 618
P+ +P+ F G+ P RG+L +G PG GKTL+ +A+
Sbjct: 738 PLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRAL 773
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 76.2 bits (179), Expect = 2e-14
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
S LL LMDG+ V+++ ATNR ++ID ALRR GRFDRE + +P R EIL IHT
Sbjct: 508 STLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLPGCEARAEILDIHT 567
Query: 183 KNMKLGDDVDL-EQIAAESHGHVGA-ISRLC 269
+ K +L E++AA G+ GA + LC
Sbjct: 568 RKWKHPPTRELKEELAATCVGYCGADLKALC 598
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 621
P+ +P+ F + + P RGVL GPPG GKTL+A+A+A
Sbjct: 400 PLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALA 436
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +2
Query: 257 LASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVE 436
L +LC+EAA++ REK + DD+ +V + V +F AM+ +P+A R +VV+
Sbjct: 594 LKALCTEAAIRAFREKYPQVYTSDDKYAIDV-GLVNVEKSHFVEAMSAITPAAHRGSVVQ 652
>At3g02450.1 68416.m00232 cell division protein ftsH, putative
similar to SWISS-PROT:P46469 cell division protein ftsH
homolog [Lactococcus lactis]; contains Pfam domain,
PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
diverse cellular 'A'ctivities)
Length = 622
Score = 75.4 bits (177), Expect = 3e-14
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT MDG + + VIV+AATNRP ++D AL R GRF R++ + PD GR +IL IH
Sbjct: 455 NQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIHL 514
Query: 183 KNMKLGDDVDL--EQIAAESHGHVGA 254
+++ L +D L + +A+ + G VGA
Sbjct: 515 RDVPLEEDAFLICDLVASLTPGFVGA 540
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/46 (50%), Positives = 28/46 (60%)
Frame = +1
Query: 532 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
+ K G + RGVL GPPG GKTLLA+A+A E F SV E +
Sbjct: 359 YKKLGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFV 404
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 74.1 bits (174), Expect = 8e-14
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+Q+L +DG K++ +IV+AATN P S+D AL R GRFDR I + PD GR +IL H
Sbjct: 348 NQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHM 407
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
+ +DVDL IA + G GA
Sbjct: 408 SKVLKAEDVDLMIIARGTPGFSGA 431
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +1
Query: 523 PDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 663
P +F + G + +GVL GPPG GKT+LA+AIA E F S G E
Sbjct: 249 PKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSE 295
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+Q LT +DG++ + V V AAT+RP+ +DPAL R GR DR + P RLEIL + +
Sbjct: 966 NQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVLS 1025
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
+ + + DD+DLE IA + G GA
Sbjct: 1026 RKLLMADDIDLEPIALMTEGFSGA 1049
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/56 (57%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Frame = +1
Query: 514 VEHPDKFLK-FGMQPSR---GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
+E P KF K F P R VL YGPPGCGKT + A A C FISVKGPELL
Sbjct: 860 IELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELL 915
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 532 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 621
F KF + +L YGPPG GKT+LA+A A
Sbjct: 585 FSKFKIPSPGHILIYGPPGSGKTILARAAA 614
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 374 DNFRYAMTKSSPSALRE---TVVEVPNVTWTDIGGLEGVKRELQELVQIRSNIPTNS*SS 544
++F AM P A+R+ + E + W D+GG+ +K ++E++++ S P S
Sbjct: 814 EDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKS 873
Query: 545 ACSLRA 562
LR+
Sbjct: 874 PLRLRS 879
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ HP+KF+K G+ P +GVL YGPPG GKTLLA+A+AN A FI V G EL+
Sbjct: 187 PMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 239
Score = 71.7 bits (168), Expect = 4e-13
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+++ +DG ++ V+ ATNRP+++DPAL R GR DR+++ G+PD R +I +IHT+
Sbjct: 294 EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTR 353
Query: 186 NMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
M D+ E +A GA I +C
Sbjct: 354 TMNCERDIRFELLARLCPNSTGADIRSVC 382
Score = 34.7 bits (76), Expect = 0.056
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +2
Query: 311 LIDLEDDQIDAEVLNSLAVSMDNFRYAMT-----KSSPSALRETVVEVPNVTWTDIGGLE 475
++ L D ++ + V +D +Y + K PS TV E P+VT+ D+GG +
Sbjct: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
Query: 476 GVKRELQELVQI 511
+++E+V++
Sbjct: 175 EQIEKMREVVEL 186
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P++ PD + FG+ G L YGPPGCGKTL+AKA ANE ANF+ +KG ELL
Sbjct: 547 PIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELL 599
Score = 67.7 bits (158), Expect = 7e-12
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Frame = +3
Query: 3 SQLLTLMDGM----------KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDAT 152
+QLLT MDG + V+V+ ATNRP+++DPALRR GRF+ EI + PD
Sbjct: 355 TQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDED 414
Query: 153 GRLEILRIHTKNMKLGDDVDLEQIAAESHGHVGA 254
R EIL + + ++L D ++IA + G VGA
Sbjct: 415 ARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGA 448
Score = 64.5 bits (150), Expect = 6e-11
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ +P+ F K G++P G+LF+GPPGCGKT LA AIANE F + E++
Sbjct: 252 PILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVI 304
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+Q L +DG ++ + V V+ ATNRP+ +DPA R GRF + + +P+A R IL+
Sbjct: 650 NQFLVELDGGERRN-VYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIA 708
Query: 183 KNMKLGDDVDLEQIAAES-HGHVGA 254
+ + VDL+ IA + G GA
Sbjct: 709 RKKPIDPSVDLDGIAKNNCEGFSGA 733
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 344 EVLNSLAVSMDNFRYAMTKSSPSALRETVVEVPNVTWTDIGGLEGVKRELQELV 505
E L L V M +F A+ S RE VP+V W D+GGL+ ++ + +
Sbjct: 491 EELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYI 544
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 72.1 bits (169), Expect = 3e-13
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLL MDG ++ V+V+A TNRP+ +D AL R GRFDR+I I PD GR +I +I+
Sbjct: 446 NQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYL 505
Query: 183 KNMKLGDDVDL--EQIAAESHGHVGA-ISRLC 269
K +KL + +++AA + G GA I+ +C
Sbjct: 506 KKIKLDHEPSYYSQRLAALTPGFAGADIANVC 537
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
+++P K+ G + +G L GPPG GKTLLAKA A E F+S+ G + +
Sbjct: 341 LKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFM 392
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ H D F G++ GVL YGPPG GKTLLAKA+A EC NF+SVKGPEL+
Sbjct: 677 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI 728
Score = 63.3 bits (147), Expect = 1e-10
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSH-VIVMAATNRPNSIDPALRRFGRFDREIDIGI-PDATGRLEILRI 176
SQ+L +DG+ SS + ++ A+NRP+ IDPAL R GRFD+ + +G+ DA+ R +L+
Sbjct: 781 SQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKA 840
Query: 177 HTKNMKLGDDVDLEQIA 227
T+ KL +DV L +A
Sbjct: 841 LTRKFKLSEDVSLYSVA 857
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 YLASLCSEAALQQIREKMDLIDLED-DQIDAEVLNSLAVSMDNFRYAMTKSSP-SALRET 427
Y++ + + + + +D+ QID A ++F A+ +S +A
Sbjct: 591 YISQESETKKINSLSDDLHGVDIHQASQIDNSTEKLTA--KEDFTKALDRSKKRNASALG 648
Query: 428 VVEVPNVTWTDIGGLEGVKRELQELVQI 511
+VPNV W D+GGLE VK + + VQ+
Sbjct: 649 APKVPNVKWDDVGGLEDVKTSILDTVQL 676
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 71.7 bits (168), Expect = 4e-13
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLL MDG ++ V+V+A TNRP+ +D AL R GRFDR+I I PD GR +I +I+
Sbjct: 452 NQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYL 511
Query: 183 KNMKLGDDVDL--EQIAAESHGHVGA-ISRLC 269
K +KL + +++AA + G GA I+ +C
Sbjct: 512 KKIKLDHEPSYYSQRLAALTPGFAGADIANVC 543
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
+++P K+ G + +G L GPPG GKTLLAKA A E F+S+ G + +
Sbjct: 346 LQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFM 397
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL +DG V V+ ATNR S+DPAL R GR DR+I+ +PD R I +IHT
Sbjct: 314 ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTS 373
Query: 186 NMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
M L +DV+LE+ GA I +C
Sbjct: 374 KMTLSEDVNLEEFVMTKDEFSGADIKAIC 402
Score = 64.9 bits (151), Expect = 5e-11
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ HP+ + G++P +GV+ YG PG GKTLLAKA+AN A F+ V G EL+
Sbjct: 207 PLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELI 259
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL +DG V V+ ATNR S+DPAL R GR DR+I+ +PD R I +IHT
Sbjct: 314 ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTS 373
Query: 186 NMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
M L +DV+LE+ GA I +C
Sbjct: 374 KMTLAEDVNLEEFVMTKDEFSGADIKAIC 402
Score = 64.9 bits (151), Expect = 5e-11
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ HP+ + G++P +GV+ YG PG GKTLLAKA+AN A F+ V G EL+
Sbjct: 207 PLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELI 259
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 70.9 bits (166), Expect = 7e-13
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +3
Query: 6 QLLTLMDGMK-KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
Q+LT MDG K +S V+V+ ATNR + +DPAL R GRFD+ I +G+P GRL IL++H
Sbjct: 442 QILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKVHA 501
Query: 183 KNMKLGDDVDLEQIAAE 233
+N + + E++ E
Sbjct: 502 RNKFFRSEDEKEELLQE 518
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
+++ ++F G+ +GVL +GPPG GKTLLAKAIA E F + G + +
Sbjct: 335 LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFV 386
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 434 EVPNVTWTDIGGLEGVKRELQELVQIRSN 520
E VT+ D G E +KRELQE+V+I N
Sbjct: 309 EKTGVTFDDFAGQEYIKRELQEIVRILKN 337
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
++L +DG ++ V+ ATNRP+ +DPAL R GR DR+++ +PD GR +I +IHT+
Sbjct: 331 EILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTR 390
Query: 186 NMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
M D+ E +A GA I +C
Sbjct: 391 TMSCERDIRFELLAGLCPNSTGADIRSVC 419
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ HP+KF++ G+ P +GVL YGPPG GKTL+A+A+AN A FI V G EL+
Sbjct: 224 PMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELV 276
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL +DG + V ++ ATNRP+ +DPAL R GR DR+I+I +P+ R+EIL+IH
Sbjct: 265 ELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAS 324
Query: 186 NMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
+ ++D E I G GA + +C
Sbjct: 325 GIAKHGEIDYEAIVKLGEGFNGADLRNIC 353
Score = 64.9 bits (151), Expect = 5e-11
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
P+ +P+ FL+ G++P +GVL YGPPG GKTLLA+AIA+ ANF+ V
Sbjct: 158 PLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKV 204
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL +DG + S+ + V+ ATNR + +D AL R GR DR+I+ P+ R +IL+IH++
Sbjct: 288 ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSR 347
Query: 186 NMKLGDDVDLEQIAAESHGHVGA 254
M L +DL++IA + +G GA
Sbjct: 348 KMNLMRGIDLKKIAEKMNGASGA 370
Score = 64.5 bits (150), Expect = 6e-11
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P++HP+ F G+ +GVL YGPPG GKTLLA+A+A+ FI V G EL+
Sbjct: 180 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = +2
Query: 311 LIDLEDDQIDAEVLN-SLAVSMDNFRYAM-----TKSSPSALRETVVEVPNVTWTDIGGL 472
++D+ D ID L S V++ N Y + +K P V +VP+ T+ IGGL
Sbjct: 108 VVDI-DKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGL 166
Query: 473 EGVKRELQELVQI 511
+ +E++E++++
Sbjct: 167 DQQIKEIKEVIEL 179
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL +DG + S+ + V+ ATNR + +D AL R GR DR+I+ P+ R +IL+IH++
Sbjct: 288 ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSR 347
Query: 186 NMKLGDDVDLEQIAAESHGHVGA 254
M L +DL++IA + +G GA
Sbjct: 348 KMNLMRGIDLKKIAEKMNGASGA 370
Score = 64.5 bits (150), Expect = 6e-11
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P++HP+ F G+ +GVL YGPPG GKTLLA+A+A+ FI V G EL+
Sbjct: 180 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = +2
Query: 311 LIDLEDDQID-AEVLNSLAVSMDNFRYAM-----TKSSPSALRETVVEVPNVTWTDIGGL 472
++D+ D ID ++ S V++ N Y + +K P V +VP+ T+ IGGL
Sbjct: 108 VVDI-DKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGL 166
Query: 473 EGVKRELQELVQI 511
+ +E++E++++
Sbjct: 167 DQQIKEIKEVIEL 179
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL +DG + V+AATNR + +DPAL R GR DR+I+ P R IL+IH++
Sbjct: 297 ELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSR 356
Query: 186 NMKLGDDVDLEQIAAESHGHVGA 254
M + DV+ E++A + GA
Sbjct: 357 KMNVHPDVNFEELARSTDDFNGA 379
Score = 66.1 bits (154), Expect = 2e-11
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ H ++F K G++P +GVL YGPPG GKTL+A+A A + A F+ + GP+L+
Sbjct: 190 PMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLV 242
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 68.5 bits (160), Expect = 4e-12
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL +DG V ++ ATNRP+ +DPAL R GR DR+I+I +P+ R++IL+IH
Sbjct: 265 ELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAA 324
Query: 186 NMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
+ ++D E I + G GA + +C
Sbjct: 325 GIAKHGEIDYEAIVKLAEGFNGADLRNIC 353
Score = 64.9 bits (151), Expect = 5e-11
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
P+ +P+ FL+ G++P +GVL YGPPG GKTLLA+AIA+ ANF+ V
Sbjct: 158 PLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKV 204
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL +DG + V+AATNR + +DPAL R GR DR+I+ P R IL+IH++
Sbjct: 296 ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSR 355
Query: 186 NMKLGDDVDLEQIAAESHGHVGA 254
M + DV+ E++A + GA
Sbjct: 356 KMNVNADVNFEELARSTDDFNGA 378
Score = 65.7 bits (153), Expect = 3e-11
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ H ++F K G++P +GVL YGPPG GKTL+A+A A + A F+ + GP+L+
Sbjct: 189 PMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLV 241
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL MDG ++ +V V+ ATNR +++DPAL R GR DR+I+ +PD + + ++ T
Sbjct: 281 ELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTS 340
Query: 186 NMKLGDDVDLE 218
M L D+VDLE
Sbjct: 341 KMNLSDEVDLE 351
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ H + + + G+ P RGVL YGPPG GKT+LAKA+AN A FI V G E +
Sbjct: 174 PLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFV 226
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2
Query: 401 SSPSALRETVVEVPNVTWTDIGGLEGVKRELQELVQI 511
SS S L ++ E P+V++ DIGG + K+E++E V++
Sbjct: 139 SSISLLSQS--EKPDVSYNDIGGCDIQKQEIREAVEL 173
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 64.5 bits (150), Expect = 6e-11
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSH--VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 176
++ + L DG H V+V+AATNRP+ +D A+ R R + +IGIPD R EIL++
Sbjct: 207 TEFMALWDGFSTDPHARVMVLAATNRPSELDEAILR--RLPQAFEIGIPDRRERAEILKV 264
Query: 177 HTKNMKLGDDVDLEQIAAESHGHVGA-ISRLCAR 275
K ++ D+D + IA G+ G+ I LC +
Sbjct: 265 TLKGERVEPDIDFDHIARLCEGYTGSDIFELCKK 298
Score = 54.8 bits (126), Expect = 5e-08
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +1
Query: 511 PVEHPDKFLKFG--MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P++ P+ F +G + P +GVL YGPPG GKT+LAKAIA E A FI+V+ L+
Sbjct: 103 PLKRPELFA-YGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLM 156
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +1
Query: 511 PVEHPDKFLKFGM-QPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P+ P+ F + + +P +G+L +GPPG GKTLLAKA+A E ANFIS+ G L
Sbjct: 169 PMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTL 221
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +1
Query: 511 PVEHPDKFLKFGM-QPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P+ P+ F + + +P +G+L +GPPG GKTLLAKA+A E ANFIS+ G L
Sbjct: 370 PMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTL 422
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
P+ PD F ++P RG+L +GPPG GKT++AKAIANE A+FI+V
Sbjct: 433 PLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINV 479
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 SQLLTLMDGMKKSS--HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 176
++ +T DG+ ++ ++V+AATNRP +D A+ R RF+R I +G+P R +ILR
Sbjct: 537 NEFMTHWDGLMSNAGDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSVESREKILRT 594
Query: 177 HTKNMKLGDDVDLEQIAAESHGHVGA 254
K +++D +++A + G+ G+
Sbjct: 595 LLSKEKT-ENLDFQELAQMTDGYSGS 619
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 446 VTWTDIGGLEGVKRELQELVQI 511
VT+ DIG L+ K LQELV +
Sbjct: 411 VTFADIGSLDETKESLQELVML 432
>At1g79560.1 68414.m09275 FtsH protease, putative contains
similarity to chloroplast FtsH protease GI:5804782 from
[Nicotiana tabacum]
Length = 1008
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/80 (36%), Positives = 44/80 (55%)
Frame = +3
Query: 15 TLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK 194
T +D VI + ATNRP+ +D R GR DR + IG+PDA R++I +H+
Sbjct: 625 TGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKN 684
Query: 195 LGDDVDLEQIAAESHGHVGA 254
L +D+D ++ + G GA
Sbjct: 685 LAEDIDFGKLVFRTVGFSGA 704
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 508 DPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 663
+P+++ +K + F RGVL GPPG GKTL A+ +A E F+ G E
Sbjct: 514 NPMQYYEKDVAF----VRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAE 561
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
P+ PD F ++P RG+L +GPPG GKT+LAKAIA E A+FI+V
Sbjct: 540 PLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINV 586
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Frame = +3
Query: 3 SQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 176
++ ++ DG+ K ++V+AATNRP +D A+ R RF+R I +G+P R +ILR
Sbjct: 644 NEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKILRT 701
Query: 177 HTKNMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
K+ +++D +++A + G+ G+ + LC
Sbjct: 702 LLAKEKVDENLDYKELAMMTEGYTGSDLKNLC 733
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 443 NVTWTDIGGLEGVKRELQELVQI 511
NVT+ DIG L+ +K LQELV +
Sbjct: 517 NVTFKDIGALDEIKESLQELVML 539
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
P+ PD F ++P RG+L +GPPG GKT+LAKAIA E A+FI+V
Sbjct: 535 PLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINV 581
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Frame = +3
Query: 3 SQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 176
++ ++ DG+ K ++V+AATNRP +D A+ R RF+R I +G+P R +ILR
Sbjct: 639 NEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKILRT 696
Query: 177 HTKNMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
K+ +++D +++A + G+ G+ + LC
Sbjct: 697 LLAKEKVDENLDYKELAMMTEGYTGSDLKNLC 728
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 443 NVTWTDIGGLEGVKRELQELVQI 511
NVT+ DIG L+ +K LQELV +
Sbjct: 512 NVTFKDIGALDEIKESLQELVML 534
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 58.4 bits (135), Expect = 4e-09
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Frame = +3
Query: 3 SQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 176
++ + DG+ K V+V+AATNRP +D A+ R R R + + +PDAT R +IL +
Sbjct: 1087 NEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIR--RLPRRLMVNLPDATNRSKILSV 1144
Query: 177 HTKNMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
++ DVDLE IA + G+ G+ + LC
Sbjct: 1145 ILAKEEIAPDVDLEAIANMTDGYSGSDLKNLC 1176
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/48 (50%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +1
Query: 511 PVEHPDKFLKFGM-QPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
P++ P+ F K + +P++G+L +GPPG GKT+LAKA+A E ANFI++
Sbjct: 982 PLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINI 1029
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 446 VTWTDIGGLEGVKRELQELVQI 511
V++ DIG LE VK L+ELV +
Sbjct: 960 VSFDDIGALENVKETLKELVML 981
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 58.0 bits (134), Expect = 5e-09
Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +3
Query: 3 SQLLTLMDGMK--KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 176
++ + L DG +++ V+V+AATNRP+ +D A+ R RF + +IG+PD R +IL++
Sbjct: 210 TEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RFPQSFEIGMPDCQERAQILKV 267
Query: 177 HTKNMKLGDDVDLEQIAAESHGHVGA-ISRLCAR 275
K + D++ ++IA + G+ I LC +
Sbjct: 268 VLKGESVESDINYDRIARLCEDYTGSDIFELCKK 301
Score = 57.6 bits (133), Expect = 7e-09
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Frame = +1
Query: 511 PVEHPDKFLKFG--MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P++ P+ F +G + P +GVL YGPPG GKT+LAKAIA E +A FI+VK L+
Sbjct: 106 PLKRPELFA-YGKLLGPQKGVLLYGPPGTGKTMLAKAIARESEAVFINVKVSNLM 159
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains
Pfam profile PF00004: ATPase, AAA family
Length = 1122
Score = 58.0 bits (134), Expect = 5e-09
Identities = 24/48 (50%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +1
Query: 511 PVEHPDKFLKFGM-QPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
P++ P+ F K + +P +G+L +GPPG GKT+LAKA+A E ANFI++
Sbjct: 839 PLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAVAKEADANFINI 886
Score = 54.8 bits (126), Expect = 5e-08
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Frame = +3
Query: 24 DGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKL 197
DG+ ++ V+V+AATNRP +D A+ R R R + +G+PD + R IL++ L
Sbjct: 951 DGLTTQERERVLVLAATNRPFDLDEAVIR--RLPRRLMVGLPDTSNRAFILKVILAKEDL 1008
Query: 198 GDDVDLEQIAAESHGHVGA-ISRLC 269
D+D+ +IA+ ++G+ G+ + LC
Sbjct: 1009 SPDLDIGEIASMTNGYSGSDLKNLC 1033
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/48 (50%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +1
Query: 511 PVEHPDKFLKFGM-QPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
P++ P+ F K + +P++G+L +GPPG GKT+LAKA+A E ANFI++
Sbjct: 969 PLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINI 1016
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +3
Query: 24 DGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKL 197
DG+ K V+V+AATNRP +D A+ R R R + + +PD+ R +IL + ++
Sbjct: 1081 DGLRTKDKERVLVLAATNRPFDLDEAVIR--RLPRRLMVNLPDSANRSKILSVILAKEEM 1138
Query: 198 GDDVDLEQIAAESHGHVGA-ISRLC 269
+DVDLE IA + G+ G+ + LC
Sbjct: 1139 AEDVDLEAIANMTDGYSGSDLKNLC 1163
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 446 VTWTDIGGLEGVKRELQELVQI 511
V+++DIG LE VK L+ELV +
Sbjct: 947 VSFSDIGALENVKDTLKELVML 968
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 1025
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +3
Query: 24 DGMK--KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKL 197
DG++ + V+V+AATNRP +D A+ R R + +G+PDA R +IL++ L
Sbjct: 854 DGLRTNEKERVLVLAATNRPFDLDEAVIR--RLPHRLMVGLPDARSRSKILKVILSKEDL 911
Query: 198 GDDVDLEQIAAESHGHVG-AISRLC 269
D D++++A+ ++G+ G + LC
Sbjct: 912 SPDFDIDEVASMTNGYSGNDLKNLC 936
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 511 PVEHPDKFLKFGM-QPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
P + P+ F K + +P G+L +GP G GKT+LAKA+A E AN I++
Sbjct: 754 PFQWPELFCKGQLTKPCNGILLFGPSGTGKTMLAKAVATEAGANLINM 801
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 446 VTWTDIGGLEGVKRELQELVQI 511
VT+ DIG LE VK L+ELV +
Sbjct: 732 VTFDDIGALENVKDTLKELVML 753
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 54.4 bits (125), Expect = 7e-08
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
S T DG +K V+V+AATN P ID ALRR R ++ I I +PD R ++ I+
Sbjct: 371 SNTATNEDGSRKI--VMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKALININL 426
Query: 183 KNMKLGDDVDLEQIAAESHGHVG 251
+ +++ DV++E +A + G+ G
Sbjct: 427 RTVEVASDVNIEDVARRTEGYSG 449
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +1
Query: 550 QPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
+P +GVL +GPPG GKTLLAKA+A EC F +V L
Sbjct: 270 RPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATL 308
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P + D F +P+RG+L +GPPG GKT+LAKA+A+E QA F +V L
Sbjct: 235 PAKRRDLFTGL-RRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSL 285
Score = 30.7 bits (66), Expect = 0.92
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 416 LRETVVE-VPNVTWTDIGGLEGVKRELQELV 505
+ T+V+ P+V W D+ GL G K+ L E+V
Sbjct: 202 INTTIVDRSPSVKWDDVAGLNGAKQALLEMV 232
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+++P F + P +G+L +GPPG GKT+LAKA+A EC F ++ ++
Sbjct: 131 PIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVV 182
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 380 FRYAMTKSSPSALRETVVEV-PNVTWTDIGGLEGVKRELQELVQIRSNIPT 529
F A T++ +L ++ PN+ W I GLE K+ L+E V + PT
Sbjct: 86 FESAETRTLAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVVMPIKYPT 136
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 266 LCSEAALQQIREKMDLIDLEDDQIDAEVLNSLA-VSMDNFRYAMTKSSPSA 415
LC EAA+Q +R + +++ +D + + L + + ++ A++ + PSA
Sbjct: 323 LCKEAAMQPLRRTLAILEDREDVVPEDELPKIGPILPEDIDRALSNTRPSA 373
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+++P F + P +G+L +GPPG GKT+LAKA+A EC F ++ ++
Sbjct: 122 PIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVV 173
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 380 FRYAMTKSSPSALRETVVEV-PNVTWTDIGGLEGVKRELQELVQIRSNIPT 529
F A T++ +L ++ PN+ W I GLE K+ L+E V + PT
Sbjct: 77 FESAETRTLAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVVMPIKYPT 127
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 266 LCSEAALQQIREKMDLIDLEDDQIDAEVLNSLA-VSMDNFRYAMTKSSPSA 415
LC EAA+Q +R + +++ +D + + L + + ++ A++ + PSA
Sbjct: 314 LCKEAAMQPLRRTLAILEDREDVVPEDELPKIGPILPEDIDRALSNTRPSA 364
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 51.2 bits (117), Expect = 6e-07
Identities = 30/80 (37%), Positives = 41/80 (51%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
S LL +DG ++ V+V+AATNR +DPAL RFD I +PD R EI+ +
Sbjct: 450 SVLLRQIDGFEQEKKVVVIAATNRKQDLDPAL--ISRFDSMIMFDLPDLQTRQEIIAQYA 507
Query: 183 KNMKLGDDVDLEQIAAESHG 242
K + + V L Q G
Sbjct: 508 KQLSKPELVQLAQATEAMSG 527
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +1
Query: 538 KFGMQPSRGVLFYGPPGCGKTLLAKAIANE 627
KF R VLF GPPG GKT A+ IAN+
Sbjct: 355 KFESNRPRAVLFEGPPGTGKTSCARVIANQ 384
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 51.2 bits (117), Expect = 6e-07
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSH-VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 179
++LL M G+ + V+V+AATN P ++D A+RR RFD+ I I +P+A R + ++H
Sbjct: 254 TELLVQMQGVGHNDEKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPEAKARQHMFKVH 311
Query: 180 TKNMKLG-DDVDLEQIAAESHGHVGAISRLCAR 275
+ + D E + ++ G G+ +C +
Sbjct: 312 LGDTPHNLTEPDFEYLGQKTEGFSGSDVSVCVK 344
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
PV+ P +F +P R L YGPPG GK+ LAKA+A E + F SV +L+
Sbjct: 151 PVKFP-QFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLV 202
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 428 VVEVPNVTWTDIGGLEGVKRELQELVQIRSNIP 526
V E PN+ W+D+ GLE K+ LQE V + P
Sbjct: 123 VREKPNIKWSDVAGLESAKQALQEAVILPVKFP 155
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P+ PD F K P +G+L +GPPG GKT++ KAIA E +A F + L
Sbjct: 29 PLLRPDIF-KGCRSPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSL 79
Score = 38.3 bits (85), Expect = 0.005
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSH-VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 179
+Q L M+G S ++++ ATNRP +D A RR R + + I +P + R I++
Sbjct: 132 TQFLIEMEGFDSGSEQILLIGATNRPQELDEAARR--RLTKRLYIPLPSSEARAWIIQNL 189
Query: 180 TKN---MKLGDDVDLEQIAAESHGHVGA-ISRLC--ARRQPCSRFVRRWISLTSRT 329
K L DD D+ I + G+ G+ + L A P ++R I +T+ T
Sbjct: 190 LKKDGLFTLSDD-DMNIICNLTEGYSGSDMKNLVKDATMGPLREALKRGIDITNLT 244
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 440 PNVTWTDIGGLEGVKRELQELV 505
PNV W DI GLE K+ + E+V
Sbjct: 5 PNVRWDDIAGLEHAKKCVTEMV 26
>At3g04340.1 68416.m00459 FtsH protease family protein similar to
chloroplast FtsH protease [Arabidopsis thaliana]
GI:1483215; contains Pfam profiles PF01434: Peptidase
family M41, PF00004: ATPase AAA family
Length = 960
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR--- 173
+QLL +DG +K V++MA T ID ALRR GR DR + P R IL
Sbjct: 549 NQLLVELDGFEKQDGVVLMATTRNHKQIDEALRRPGRMDRVFHLQSPTEMERERILHNAA 608
Query: 174 IHTKNMKLGDDVDLEQIAAES 236
T + +L D VD +++ ++
Sbjct: 609 EETMDRELVDLVDWRKVSEKT 629
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
+++P F + G + RGVL G G GKT LA AIA E + ++V+ EL
Sbjct: 443 LQNPKAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQEL 493
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 496 RTRADPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
+TR + + K P R ++FYGPPG GKT++A+ IA + ++ + G ++
Sbjct: 365 KTRIERLARATANTKSHKAPFRNMMFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV 421
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +3
Query: 36 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDD 206
+S ++++ ATNRP +D A+ R D I+ +P R ++L+++ +GDD
Sbjct: 483 QSRDIVLVLATNRPGDLDSAVT--DRIDEVIEFPLPGEEERFKLLKLYLNKYLMGDD 537
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +1
Query: 553 PSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P R ++FYGPPG GKT++A+ IA + ++ + G ++
Sbjct: 369 PFRNMMFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV 406
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
+ D + + G RG L YGPPG GKT L AIAN
Sbjct: 231 IRRKDFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIAN 267
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 553 PSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P R +LFYGPPG GKT+ A+ +A ++ + G ++
Sbjct: 397 PFRNILFYGPPGTGKTMAARELARRSGLDYALMTGGDV 434
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 36 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 179
+S +++ ATNRP +D A+ R D ++ +P R ++L ++
Sbjct: 496 QSKDIVLALATNRPGDLDSAVA--DRIDETLEFPLPGEEERFKLLNLY 541
>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
similarity to mitochondrial ATPase (AAA family) Bcs1p,
Saccharomyces cerevisiae, Swiss Prot:P32839
Length = 248
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
D F G RG L YGPPG GK+ L AIAN
Sbjct: 21 DFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIAN 53
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
D + K G RG L YGPPG GK+ + A+AN
Sbjct: 226 DYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMAN 258
>At2g37280.1 68415.m04573 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1413
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANECQAN 639
+ P R L GPPGCGKT L KA++ + N
Sbjct: 162 ISPGRLTLLLGPPGCGKTTLLKALSGNLENN 192
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 7/56 (12%)
Frame = +1
Query: 478 SEA*TPRTRADPV--EH---PDKFLKFGMQPSR--GVLFYGPPGCGKTLLAKAIAN 624
SE PRT D V +H P L+ ++ +R ++F+GPPG GKT +AK++ N
Sbjct: 104 SERMRPRTLDDVVGQDHLLSPSSLLRSAVESNRLPSIVFWGPPGTGKTSIAKSLIN 159
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
V+ D + + G RG L YGPPG GK+ L A+AN
Sbjct: 285 VKRRDFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 321
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
D F G RG L YGPPG GK+ + AIAN
Sbjct: 229 DFFKSVGRAWKRGYLLYGPPGTGKSSMVAAIAN 261
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 532 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVK 654
+ K G RG L YGPPG GK+ + A+AN N ++
Sbjct: 233 YKKIGKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDLE 273
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
V D + + G RG L YGPPG GK+ L A+AN
Sbjct: 231 VGRKDFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMAN 267
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = +1
Query: 493 PRTRADPVEHPDKFL-------KFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
P + + VE D+F+ + G RG L YGPPG GK+ L AIAN
Sbjct: 219 PEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGKSSLIAAIAN 269
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
D + K G RG L +GPPG GK+ + AIAN
Sbjct: 233 DYYKKVGKPWKRGYLLFGPPGTGKSTMIAAIAN 265
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 538 KFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
K P R +L +GPPG GKT+ A+ +A + ++ + G ++
Sbjct: 391 KLHQAPFRNILLHGPPGTGKTMAARELARKSGLDYALMTGGDV 433
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 36 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 179
+S +++ ATNRP +D A+ R D ++ +P R ++L ++
Sbjct: 495 QSKDIVLALATNRPGDLDSAVA--DRVDEVLEFPLPGEEERFKLLNLY 540
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
D + K G RG L +GPPG GK+ + A+AN
Sbjct: 233 DYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMAN 265
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
D + K G RG L +GPPG GK+ + A+AN
Sbjct: 230 DYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMAN 262
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
D + K G RG L +GPPG GK+ + A+AN
Sbjct: 229 DYYRKVGKPWKRGYLLFGPPGTGKSTMISAMAN 261
>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 341
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
+ + + + G RG L YGPPG GK+ L A+AN
Sbjct: 239 IRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMAN 275
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
+ + + + G RG L YGPPG GK+ L A+AN
Sbjct: 239 IRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMAN 275
>At5g17750.1 68418.m02081 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 392
Score = 35.1 bits (77), Expect = 0.043
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Frame = +1
Query: 490 TPRTRADPVEHPDKFLK-------FGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
TP+ ++ +E D+F+K G R YGPPG GK+ L A+AN
Sbjct: 191 TPKLKSSVMEDLDRFIKRKDYYKRVGKAWKRSYFLYGPPGTGKSSLVAAMAN 242
>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 512
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 532 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
+ K G RG L YGPPG GK+ L A+AN
Sbjct: 230 YQKTGRAWKRGYLLYGPPGTGKSSLIAAMAN 260
>At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP101,
putative similar to heat shock protein 101 GI:6715468
GB:AAF26423 from [Arabidopsis thaliana]
Length = 623
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +1
Query: 550 QPSRGVLFYGPPGCGKTLLAKAIANE 627
QPS LF GP G GKT LAKA+A +
Sbjct: 562 QPSGSFLFLGPTGVGKTELAKALAEQ 587
>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like
ABC transporter, Spirodela polyrrhiza, EMBL:Z70524
Length = 1450
Score = 35.1 bits (77), Expect = 0.043
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANECQAN 639
++P R L GPP CGKT L KA++ + N
Sbjct: 197 IKPGRLTLLLGPPSCGKTTLLKALSGNLENN 227
>At4g15230.1 68417.m02333 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1326
Score = 34.7 bits (76), Expect = 0.056
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANE 627
++P R L GPPGCGKT L +A++ +
Sbjct: 164 VRPGRMTLLLGPPGCGKTTLLQALSGK 190
>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 538 KFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVK 654
+ G RG L YGPPG GK+ + A+AN + N ++
Sbjct: 230 RIGKAWKRGYLLYGPPGTGKSTMIAAMANLMKYNIYDLE 268
>At1g08270.2 68414.m00912 expressed protein low similarity to
SP|P46467 SKD1 protein (Vacuolar sorting protein 4b)
{Mus musculus}
Length = 132
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 434 EVPNVTWTDIGGLEGVKRELQELVQIRSNIP 526
E PNV WT + GLE K+ L+E V + N P
Sbjct: 86 EKPNVKWTVVAGLESAKQALKEAVILPVNFP 116
>At1g08270.1 68414.m00913 expressed protein low similarity to
SP|P46467 SKD1 protein (Vacuolar sorting protein 4b)
{Mus musculus}
Length = 126
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 434 EVPNVTWTDIGGLEGVKRELQELVQIRSNIP 526
E PNV WT + GLE K+ L+E V + N P
Sbjct: 86 EKPNVKWTVVAGLESAKQALKEAVILPVNFP 116
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 34.3 bits (75), Expect = 0.074
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 532 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
+ K G RG L YGPPG GK+ + A+AN
Sbjct: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 34.3 bits (75), Expect = 0.074
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIA 621
++P R L GPPGCGKT L +A++
Sbjct: 161 VRPGRMTLLLGPPGCGKTTLLQALS 185
>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 478
Score = 34.3 bits (75), Expect = 0.074
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
D + K RG L +GPPG GK+ + AIAN
Sbjct: 218 DYYRKVAKPWKRGYLLFGPPGTGKSTMISAIAN 250
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 34.3 bits (75), Expect = 0.074
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 532 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
+ + G RG L YGPPG GK+ L A+AN
Sbjct: 235 YKRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 265
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 34.3 bits (75), Expect = 0.074
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 532 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
+ + G RG L YGPPG GK+ L A+AN
Sbjct: 236 YKRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 266
>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
to heat shock protein 101 GI:6715468 GB:AAF26423 from
[Arabidopsis thaliana]
Length = 911
Score = 33.9 bits (74), Expect = 0.098
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 550 QPSRGVLFYGPPGCGKTLLAKAIANE 627
QP+ LF GP G GKT LAKA+A +
Sbjct: 597 QPTGSFLFLGPTGVGKTELAKALAEQ 622
>At1g21690.2 68414.m02715 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 327
Score = 33.9 bits (74), Expect = 0.098
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIANE 627
+LFYGPPG GKT A AIA++
Sbjct: 33 MLFYGPPGTGKTTTALAIAHQ 53
>At1g21690.1 68414.m02714 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 339
Score = 33.9 bits (74), Expect = 0.098
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIANE 627
+LFYGPPG GKT A AIA++
Sbjct: 45 MLFYGPPGTGKTTTALAIAHQ 65
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 532 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 624
+ K G RG L +GPPG GK+ + A+AN
Sbjct: 228 YKKIGKAWKRGYLLHGPPGTGKSTMIAAMAN 258
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIA 621
++P R L GPPGCGKT L A++
Sbjct: 159 IRPKRMTLLLGPPGCGKTTLLLALS 183
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 541 FGMQPSRGVLFYGPPGCGKTLLAKAIANE-CQANFISVKGP 660
+G P V+ GPPG GK+L+ K++ E + N V+GP
Sbjct: 78 YGEAPPFVVVVQGPPGVGKSLVIKSLVKEFTKQNVPEVRGP 118
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 559 RGVLFYGPPGCGKTLLAKAIAN 624
RG L YGPPG GK+ + A+AN
Sbjct: 238 RGYLLYGPPGTGKSSMIAAMAN 259
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 556 SRGVLFYGPPGCGKTLLAKAIANE 627
+R +L +GPPG GKT L KA+A +
Sbjct: 202 NRIILLHGPPGTGKTSLCKALAQK 225
>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1188
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 627
++H L G R ++ YG G GKT LAK NE
Sbjct: 195 LQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNE 232
>At4g21880.1 68417.m03164 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 845
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 9 LLTLMDGMKKSSHVIVMAATNRPNS-IDPALRRFGRFDREIDIGIPDAT 152
L L DG++ S++I AT PNS ++ A+ +F + E+DI +P +T
Sbjct: 285 LSILQDGVETVSNLIFSYATCIPNSTVEDAIFKFNKLHEELDI-VPSST 332
>At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 964
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 460 HRRAGGSEA*TPRTRADPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 621
H R G + ++ AD + L +P +F GP G GKT LAKA+A
Sbjct: 652 HHRVIGQDM-AVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALA 704
>At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding
subunit (ClpD), (ERD1) SAG15/ERD1; identical to ERD1
protein GI:497629, SP:P42762 from [Arabidopsis
thaliana]; contains Pfam profile PF02861: Clp amino
terminal domain
Length = 945
Score = 31.5 bits (68), Expect = 0.52
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = +1
Query: 457 RHRRAGGSEA*TPRTRADPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 621
R R G EA +RA V+ LK +P +LF GP G GKT L KA+A
Sbjct: 626 RGRVVGQDEAVAAISRA--VKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALA 678
>At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1240
Score = 31.1 bits (67), Expect = 0.69
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
++ L+ + R + +GPPG GKT +A+ + N+ F
Sbjct: 279 EQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRF 317
>At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 31.1 bits (67), Expect = 0.69
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
++ L+ + R + +GPPG GKT +A+ + N+ F
Sbjct: 279 EQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRF 317
>At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 31.1 bits (67), Expect = 0.69
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
++ L+ + R + +GPPG GKT +A+ + N+ F
Sbjct: 279 EQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRF 317
>At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1194
Score = 31.1 bits (67), Expect = 0.69
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
++ L+ + R + +GPPG GKT +A+ + N+ F
Sbjct: 283 EQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRF 321
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
to pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS 648
++P R L GPPG GK+ L KA++ + + S
Sbjct: 169 IKPGRLTLLLGPPGSGKSTLLKALSGKTETGLRS 202
>At2g36380.1 68415.m04464 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1453
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANE 627
++PSR L GPP GKT L +A+A +
Sbjct: 196 IKPSRMTLLLGPPSSGKTTLLQALAGK 222
>At1g66950.1 68414.m07612 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1454
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANE 627
++PSR L GPP GKT L +A+A +
Sbjct: 198 VKPSRMTLLLGPPSSGKTTLLQALAGK 224
>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1038
Score = 30.7 bits (66), Expect = 0.92
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
D L + + +GP G GKT +A+A+ N+ NF
Sbjct: 195 DSLLCLNSDEVKMIGIWGPAGIGKTTIARALYNQLSTNF 233
>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1193
Score = 30.7 bits (66), Expect = 0.92
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 577 GPPGCGKTLLAKAIANECQANF 642
GPPG GKT +A+A+ ++ NF
Sbjct: 221 GPPGIGKTTIARALRDQISENF 242
>At4g15233.1 68417.m02334 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1168
Score = 30.7 bits (66), Expect = 0.92
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIA 621
++P R L GPP CGKT L A++
Sbjct: 161 IRPKRMTLLLGPPSCGKTTLLLALS 185
>At3g49210.1 68416.m05378 expressed protein
Length = 518
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -1
Query: 190 MFLVCMRRISRRPVASGMPMSISRSNRPKRRSAGSMEFGRFVAAITITW 44
+ L CMR+ S +P S+R R AGS RF+ + + W
Sbjct: 174 LVLACMRKTSNPDELPSLPNQNRSSSRSSRLMAGSRGDSRFLWLVMVIW 222
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 30.7 bits (66), Expect = 0.92
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIANECQANFI 645
VL GP G GKTLLAK +A F+
Sbjct: 311 VLLMGPTGSGKTLLAKTLARLVNVPFV 337
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIANECQANFI 645
+L GP G GKTLLAK +A F+
Sbjct: 226 ILLMGPTGSGKTLLAKTLARFVNVPFV 252
>At5g25140.1 68418.m02979 cytochrome P450 family protein CYTOCHROME
P450 71B1 - Thlaspi arvense, EMBL:L24438
Length = 496
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 398 KSSPSALRETVVEVPNVTWTDIGGLEGVKRELQELVQIRSNIP 526
K + + +RE + N+T DI GLE +K ++E ++I +P
Sbjct: 321 KKAQAEVREVIKNKDNITEEDIEGLEYLKMVVKETLRINPLVP 363
>At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 968
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 550 QPSRGVLFYGPPGCGKTLLAKAIAN 624
+P +F GP G GKT LAKA+A+
Sbjct: 676 RPIASFMFMGPTGVGKTELAKALAS 700
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 550 QPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
Q R V +GP G GKT +A+A+ N+ NF
Sbjct: 203 QGVRIVGIWGPAGVGKTTIARALYNQYHENF 233
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANECQAN 639
++PSR L GPP GKT L A+A N
Sbjct: 158 IRPSRLTLLLGPPSSGKTTLLLALAGRLGTN 188
>At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 492
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 291 RFVRRWISLTSRTIRLTQRFSILWLSPW 374
RFV+RW+ + S RLT +W+S W
Sbjct: 445 RFVKRWVEILSEP-RLTHEIRGIWISYW 471
>At5g45200.1 68418.m05548 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1261
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 577 GPPGCGKTLLAKAIANECQANFI 645
G PG GKT LAK + +EC +F+
Sbjct: 244 GMPGIGKTTLAKRLFSECGKHFL 266
>At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Non-consensus TT donor splice site at exon 1
Length = 1104
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 526 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
D FL + + +GP G GKT +A+A+ N+ F
Sbjct: 196 DSFLCLESDDVKMIGIWGPAGIGKTTIARALFNQLSTGF 234
>At5g17890.1 68418.m02098 LIM domain-containing protein / disease
resistance protein-related low similarity to disease
resistance protein RPP4 [Arabidopsis thaliana]
GI:20270890; contains Pfam profiles PF00412: LIM domain,
PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1613
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 559 RGVLFYGPPGCGKTLLAKAIANECQANF 642
R + +G PG GKT LAKA+ N ++
Sbjct: 190 RSIGIWGMPGIGKTTLAKAVFNHMSTDY 217
>At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1981
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
+E+ L+ + R + +GPPG GKT +A+ + ++ +F
Sbjct: 209 MENMRALLRLDLDDVRMIGIWGPPGIGKTTIARFLLSQVSKSF 251
>At3g16340.1 68416.m02066 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]; contains Pfam profile: PF00005 ABC
transporter
Length = 1416
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANE 627
++PSR L GPP GKT L A+A +
Sbjct: 170 IKPSRMTLLLGPPSSGKTTLLLALAGK 196
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 529 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 627
+ + + R VL YGP G GK+ L + +A+E
Sbjct: 344 EMVSLAVSQKRPVLLYGPSGSGKSALIRKLADE 376
>At1g15210.1 68414.m01818 ABC transporter family protein Similar to
gb|Z70524 GI:1514643 PDR5-like ABC transporter from
Spirodela polyrrhiza and is a member of the PF|00005 ABC
transporter family. ESTs gb|N97039 and gb|T43169 come
from this gene
Length = 1442
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANE 627
++PSR L GPP GKT L A+A +
Sbjct: 192 VKPSRMTLLLGPPSSGKTTLLLALAGK 218
>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]; non-consensus splice donor GC at exon 4;
non-consensus splice donor AA at exon 7
Length = 606
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIA 621
VL GP G GKTLLAK +A
Sbjct: 265 VLLLGPTGSGKTLLAKTLA 283
>At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial
(LON) identical to Lon protease homolog 1 mitochondrial
precursor SP:O64948 from [Arabidopsis thaliana]
Length = 888
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 571 FYGPPGCGKTLLAKAIANECQANFI 645
F GPPG GKT LA +IA F+
Sbjct: 406 FVGPPGVGKTSLASSIAAALGRKFV 430
>At5g27950.1 68418.m03366 kinesin motor protein-related kinesin
heavy chain-like protein, potato, PIR:T07397
Length = 625
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2
Query: 624 VGDGLCQQSFTTTRRSVEENTARRLHAELQE 532
VG+ +C SFT R+VE N R L AELQ+
Sbjct: 388 VGETICSLSFTKRARAVESN--RGLTAELQK 416
>At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1189
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 574 YGPPGCGKTLLAKAIANECQANF 642
+GPPG GKT +A+ + N+ +F
Sbjct: 263 WGPPGIGKTTIARVVYNQLSHSF 285
>At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 896
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 508 DPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
D +E L + + +GPPG GKT +A+++ N+ F
Sbjct: 242 DHMEKMKPLLDIDSDEMKTIGIWGPPGVGKTTIARSLYNQHSDKF 286
>At5g63400.1 68418.m07958 adenylate kinase identical to adenylate
kinase (ATP-AMP transphosphorylase) [Arabidopsis
thaliana] SWISS-PROT:O82514
Length = 246
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 535 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 627
LK +P + ++F GPPG GK + + +E
Sbjct: 26 LKCSQKPDKRLIFIGPPGSGKGTQSPVVKDE 56
>At5g44320.1 68418.m05427 eukaryotic translation initiation factor 3
subunit 7, putative / eIF-3 zeta, putative / eIF3d,
putative similar to initiation factor 3d [Arabidopsis
thaliana] GI:12407755, SP|O15371 Eukaryotic translation
initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66)
(eIF3d) {Homo sapiens}; contains Pfam profile PF05091:
Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)
Length = 588
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +3
Query: 114 FDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIAAESHGHVGAISRLCARRQPCSR 293
+DR D P A RLE + + + DD+ + ++A E V A + A R
Sbjct: 220 YDRSFDRITPKADRRLERFKNRSFKVTTSDDLVIRRLAKEDKATVFATDAILAALMCAPR 279
Query: 294 FVRRW 308
V W
Sbjct: 280 SVYSW 284
>At5g18360.1 68418.m02160 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 900
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 574 YGPPGCGKTLLAKAIANECQANF 642
+GP G GKT +A+A+ N NF
Sbjct: 213 WGPAGIGKTTIARALFNRLSENF 235
>At2g29940.1 68415.m03642 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1426
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANE 627
++P R L GPPG GK+ L A+A +
Sbjct: 183 IKPGRMTLLLGPPGSGKSTLLLALAGK 209
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 535 LKFGMQPSRGVLFYGPPGCGKTLLAKAIA 621
LK +P +F GP G GK+ LAKA+A
Sbjct: 631 LKNPNRPIASFIFSGPTGVGKSELAKALA 659
>At5g45050.2 68418.m05524 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1344
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 559 RGVLFYGPPGCGKTLLAKAIANECQANF 642
R V +G PG GKT LAKA+ ++ F
Sbjct: 164 RCVGIWGMPGIGKTTLAKAVFDQMSGEF 191
>At5g45050.1 68418.m05523 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1372
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 559 RGVLFYGPPGCGKTLLAKAIANECQANF 642
R V +G PG GKT LAKA+ ++ F
Sbjct: 164 RCVGIWGMPGIGKTTLAKAVFDQMSGEF 191
>At5g22330.1 68418.m02605 TATA box-binding protein-interacting
protein-related similar to TATA box-binding
protein-interacting protein SP:O35753 from [ Mus
musculus]
Length = 458
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 559 RGVLFYGPPGCGKTLLAKAIANE 627
+ +L GPPG GKT LA I+ E
Sbjct: 67 KALLLAGPPGTGKTALALGISQE 89
>At4g26090.1 68417.m03756 disease resistance protein RPS2
(CC-NBS-LRR class), putative domain signature CC-NBS-LRR
exists, suggestive of a disease resistance protein.
identical to RPS2 (gi:13661831)
Length = 909
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 550 QPSRGVL-FYGPPGCGKTLLAKAIANE 627
+ RG++ YGP G GKT L ++I NE
Sbjct: 172 EEERGIIGVYGPGGVGKTTLMQSINNE 198
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 535 LKFGMQPSRGVLFYGPPGCGKTLLAKAIA 621
LK +P +F GP G GK+ LAKA+A
Sbjct: 652 LKNPNRPIASFIFSGPTGVGKSELAKALA 680
>At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1556
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +1
Query: 514 VEHPDKFLK--FGMQPSRGVL---FYGPPGCGKTLLAKAIANECQANF 642
+E P K L F + S G+ YG G GKT LAKA N+ NF
Sbjct: 365 LESPIKDLMKLFNTESSSGIQVMGLYGMGGIGKTTLAKAFYNKIIVNF 412
>At5g66770.1 68418.m08416 scarecrow transcription factor family
protein
Length = 584
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 503 RVLGVHASLPPARRCRSTSRWELPPLSHVTPTE 405
RV+ + LPP +S +PPL+H +PT+
Sbjct: 166 RVIDTSSPLPPPTLWPPSSPLSIPPLTHESPTK 198
>At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1187
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 559 RGVLFYGPPGCGKTLLAKAIANECQANF 642
R V +G PG GKT LAKA+ ++ + F
Sbjct: 173 RCVGIWGMPGIGKTTLAKAVFDQMSSAF 200
>At5g08260.1 68418.m00971 serine carboxypeptidase S10 family protein
similar to Serine carboxypeptidase II chains A and B
(SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
carboxypeptidase D - Triticum aestivum, PIR:A29639
Length = 480
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 282 PCSRFVRRWISLTSRTIRLTQRFSILWLSPWITSG 386
PCS ++RW S I + Q+ L WI SG
Sbjct: 362 PCSGVIKRWSDAPSTMIPIIQKLLTGGLRIWIYSG 396
>At4g19500.1 68417.m02868 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein. A false
intron was added between exons 2 and 3 to circumvent a
frameshift caused by a sequencing error, as per Blake
Meyers (bcmeyers@vegmail.ucdavis.edu)
Length = 1308
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
+E L+ + +R V GP G GKT +AKA+ ++ F
Sbjct: 190 LEAMSSILRLKSEKARMVGISGPSGIGKTTIAKALFSKLSPQF 232
>At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1007
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
+E ++ L+ + R + GPPG GKT +A + + F
Sbjct: 220 MERTEQLLRLDLDEVRMIGILGPPGIGKTTIATCMFDRFSRRF 262
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 559 RGVLFYGPPGCGKTLLAKAIANECQANF 642
R + +GPPG GKT + + + N+ ++F
Sbjct: 252 RMIGIWGPPGIGKTTIVRFLYNQLSSSF 279
>At1g59870.1 68414.m06745 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1469
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANE 627
++P R L GPP GKT L A+A +
Sbjct: 194 IKPGRMTLLLGPPSSGKTTLLLALAGK 220
>At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1544
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 574 YGPPGCGKTLLAKAIANECQANF 642
YG G GKT LAKA N+ NF
Sbjct: 377 YGMGGIGKTTLAKAFYNKIVGNF 399
>At1g15520.1 68414.m01867 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1423
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANE 627
++P R L GPP GKT L A+A +
Sbjct: 177 VKPGRMALLLGPPSSGKTTLLLALAGK 203
>At5g67630.1 68418.m08527 DNA helicase, putative similar to
RuvB-like DNA helicase reptin [Danio rerio] GI:27733814,
reptin [Drosophila melanogaster] GI:7243682
Length = 469
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 529 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE--CQANFISVKGPEL 666
+ ++ G R +L G PG GKT +A +A + F + G E+
Sbjct: 57 QMIREGKIAGRAILIAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEI 104
>At5g66910.1 68418.m08434 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 815
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIANE 627
V+ GPPGCGKT L + ++
Sbjct: 192 VVVSGPPGCGKTTLVTKLCDD 212
>At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 574 YGPPGCGKTLLAKAIANECQANF 642
YGP G GKT +A+A+ + ++F
Sbjct: 216 YGPAGIGKTTIARALHSRLSSSF 238
>At5g50370.1 68418.m06238 adenylate kinase, putative similar to
adenylate kinase (ATP-AMP transphosphorylase)
[Arabidopsis thaliana] SWISS-PROT:O82514
Length = 248
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 535 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 627
+K +P + ++F GPPG GK + I +E
Sbjct: 27 MKCASKPDKRLVFIGPPGSGKGTQSPVIKDE 57
>At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 531
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 508 DPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
D ++ ++ L + R + +GPPG GKT +A+ + + +F
Sbjct: 245 DHMKKLERMLYLDLNDVRMIGIWGPPGIGKTSIARVLFRKHSDSF 289
>At1g77470.1 68414.m09021 replication factor C 36 kDA, putative
similar to SWISS-PROT:P40937 activator 1 36 kDa subunit
(Replication factor C 36 kDa subunit, A1 36 kDa subunit,
RF-C 36 kDa subunit, RFC36) [Homo sapiens]
Length = 369
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIANE 627
+L YGPPG GKT A+A +
Sbjct: 75 LLLYGPPGTGKTSTILAVARK 95
>At5g46570.1 68418.m05734 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 489
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 329 DQIDAEVLNSLAVSMDNFRYAMTKSSPSAL-RETVVEVPNVTWTDIGGLEG 478
DQ+D E+ N ++ R A SPS + E + PNV + G LEG
Sbjct: 29 DQVDQEIQNFKEFELNELRKATNGFSPSCIVSEGGEKAPNVVYR--GKLEG 77
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 559 RGVLFYGPPGCGKTLLAKAIANECQANF 642
R V +GP G GKT +A+A+ N +F
Sbjct: 203 RMVGIWGPTGIGKTTIARALFNRIYRHF 230
>At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam
profile: ATPase family PF00004
Length = 440
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 621
+ D + + G R L +G PG GKT L AIA
Sbjct: 185 ISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIA 220
>At1g73170.1 68414.m08466 expressed protein
Length = 666
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIA 621
+Q +L GPPG GKT + + +A
Sbjct: 194 VQDGNSLLLIGPPGVGKTTMIREVA 218
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,903,138
Number of Sequences: 28952
Number of extensions: 282231
Number of successful extensions: 1390
Number of sequences better than 10.0: 162
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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