Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021890
         (559 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   5.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.5  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   9.5  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = +3

Query: 69  LYILVYVSPFTRKYYHAQINRYYFVHWMTTKYIY--SLVRTITERILWLDTKTG 224
           ++IL  +     + YH +I +YY + +     +Y  S +  I   ++    +TG
Sbjct: 308 VFILWIILVPEEQVYHLEIEKYYNILYFCRIMVYLNSAINPILYNLMSSKFRTG 361


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 405 LKFHRPKIVICMEHFFLNLNQ 343
           LK   PK+ +CM++  +N +Q
Sbjct: 603 LKHIVPKLQLCMQNLVINPHQ 623


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 223 PVFVSNQSMRSVIVLTNEYM 164
           PVF+   S ++V  + N+Y+
Sbjct: 16  PVFIGKGSKKTVFDIPNDYL 35


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 451 HPYSFDGPTKKPVYRLLSSYW 513
           HP  F G  K+  Y +L++++
Sbjct: 128 HPMKFSGSWKRARYLILAAWF 148


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 466 QNYKDAIVPHRLRLHD 419
           +N  +A+VP +LRL D
Sbjct: 108 RNQIEALVPRKLRLAD 123


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 262 IIVASASQDTYIRLWRIQKVKAQPESKLIKVEEKVFHAY 378
           ++  S  Q T   + +IQKV A  +    K   K+ H Y
Sbjct: 72  VLRGSCPQCTPQEMKQIQKVLAFVQKNYPKEWNKILHQY 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,460
Number of Sequences: 336
Number of extensions: 3578
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)