Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021890
         (559 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    26   0.73 
AY748832-1|AAV28180.1|   69|Anopheles gambiae cytochrome P450 pr...    24   2.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   5.1  
DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    23   6.8  
AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450 pr...    23   6.8  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 26.2 bits (55), Expect = 0.73
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 429 LSLWGTMASL*F*WSY*EAGIPSPVIILDKTLII 530
           L++WG M  L   W   +AGI   V+++  T ++
Sbjct: 200 LNIWGVMLFLRLSWVVGQAGIAQGVLLICMTTVV 233


>AY748832-1|AAV28180.1|   69|Anopheles gambiae cytochrome P450
           protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 487 PAS**DHQN--YKDAIVPHRLRLHDRQALPQVSQTKDCHMHGTLFP 356
           P S  D+QN  Y D ++   LRL+   A    + + +  + GT FP
Sbjct: 19  PRSVQDYQNLPYLDRVIKESLRLYPPVAFISRTTSGELVVDGTTFP 64


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 14/50 (28%), Positives = 19/50 (38%)
 Frame = +2

Query: 182 DYHRAHTLVGHEDWVRGLDVLEVDTTQLS*RRLLKIHTSVCGGYKRSKPN 331
           DY + ++++   DW        VD    S   LL      C    RS PN
Sbjct: 283 DYRKLNSILSRADWSFFYQCTSVDEAVQSFNALLTSALLSCTPIFRSPPN 332


>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 161

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 114 GSICA*RVRHKPECRD 67
           G  CA R+RH   CRD
Sbjct: 107 GCNCAVRIRHAYPCRD 122


>AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450
           protein.
          Length = 171

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 474 RTIKTIRMPLYPIDSGFMTGKHCLKFHRPK 385
           +TI TI++  Y I  GF+   +    HR K
Sbjct: 124 KTIGTIQLDEYVIPKGFILLLNVFALHRQK 153


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,237
Number of Sequences: 2352
Number of extensions: 15368
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)