Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021889
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.43 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   4.0  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   4.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.3  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 594 SSNAFRFEGWGSRCNYTETLELISQGGW 677
           + N+ ++ G      Y E +EL  +GGW
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGW 311


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 427 RKIGTGVVHWYRPR 386
           R I  GV HW+ PR
Sbjct: 62  RVIMPGVTHWHSPR 75


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 94  IVNKSSHKHRFIKDLFKNLQTNLASVH 174
           + N  S KH F+K+   +  T L S+H
Sbjct: 79  LTNNISDKHGFLKEKAVDFLTILNSMH 105


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -3

Query: 571 VVPTRADSQEVLPPVITQIIICGFHFY 491
           VV T       LP V+T II   FH Y
Sbjct: 101 VVATTKTKAWFLPFVVTNIIFVLFHTY 127


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 600 NAFRFEGWGSRCNYTETLELISQGGW 677
           +A R+ G      Y E +E  + GGW
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 208 NSYVQLVNFKRCELKPGLSG 149
           N Y + V ++  EL PGL G
Sbjct: 402 NHYEEFVRYELGELAPGLVG 421


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -3

Query: 514 IICGFHFYYTMLFL 473
           ++C ++FYY  + L
Sbjct: 97  LLCTYYFYYAFIIL 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,546
Number of Sequences: 336
Number of extensions: 3523
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)