Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021887
         (654 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6DMP1 Cluster: Putative uncharacterized protein; n=1; ...    35   2.0  

>UniRef50_A6DMP1 Cluster: Putative uncharacterized protein; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Putative
           uncharacterized protein - Lentisphaera araneosa HTCC2155
          Length = 730

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +2

Query: 68  IFHTDLLFSNKFMIKLILSFDWMKGCQFFIVRRFIIDTASQTLRAFVLQMPMVRQFCFLL 247
           + + D + SN +   L+L F         I++ F++D     +    L +P+V  FC L+
Sbjct: 197 LLYADFVLSNSYAAHLVLVFGIFLYMLTHILKSFVVDNKRILMWTITLALPLV--FCLLI 254

Query: 248 ACSRG 262
             SRG
Sbjct: 255 TRSRG 259


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,693,823
Number of Sequences: 1657284
Number of extensions: 12754616
Number of successful extensions: 30323
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 29157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30307
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)