Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021887
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   1.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.7  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.9  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   8.9  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = +2

Query: 167 FIIDTASQTLRAFVLQMPM---VRQFCFLLACSRGTCHVPYFFYNSLYYQRVR 316
           F+  T +     FV+  P    +   CFLL+   GTC   +  Y  +Y + +R
Sbjct: 22  FLSITPNYDFENFVIISPRCDKISAICFLLSTILGTC---WIIYVRIYCKEIR 71


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 513 FVIFEMSILFCLA 551
           F+IF M +LFC A
Sbjct: 173 FIIFTMHLLFCCA 185


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 498 PEPHTSTQPRP 466
           PEP  ST PRP
Sbjct: 400 PEPTISTTPRP 410


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +3

Query: 456 HWKLAGVAWMCAVQDS 503
           HW  A + W+  + DS
Sbjct: 259 HWAFAPIRWVAKLWDS 274


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 340 CL*LTCLSSYPLVIQAVIEEI 278
           C  L C++ +P + + + EEI
Sbjct: 6   CFALMCIACHPDIQERIFEEI 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,768
Number of Sequences: 336
Number of extensions: 3459
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)