SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021886
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   0.78 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.78 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   0.78 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   3.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   3.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   3.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   3.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.2  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    21   9.6  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 79  FRLWVTMYKE*QYITQVKNMNTK*TP 2
           F+LW T+Y   Q   +V++ + + TP
Sbjct: 278 FQLWATVYTSSQVTREVQSRSNRMTP 303


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 9   YLVFIFLTCVIYCYSLYIV 65
           Y  FI L CV Y Y  +I+
Sbjct: 104 YYAFIILLCVYYFYYAFII 122



 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 12  LVFIFLTCVIYCYSLYIV 65
           L  +FL C+ Y YS +I+
Sbjct: 204 LHLLFLPCIYYFYSAFII 221



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 9   YLVFIFLTCVIYCYSLYIV 65
           Y V I L C+ Y Y  +I+
Sbjct: 229 YCVLIILLCIYYFYYAFIL 247


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 79  FRLWVTMYKE*QYITQVKNMNTK*TP 2
           F+LW T+Y   Q   +V++ + + TP
Sbjct: 274 FQLWATVYTSSQVTREVQSRSNRMTP 299


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 245 PFRT*RRVSSWAGDQNRSGQEPEGA 319
           P+ T R +SS+A D N  G   +GA
Sbjct: 335 PYGTTRLMSSFAFDNNDQGPPQDGA 359


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 217 HGKRTSRPRTIQ 252
           HGK  SRPR IQ
Sbjct: 109 HGKYLSRPRRIQ 120


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 21  IFLTCVIYCYSLYIVTHNL 77
           + L CV+Y   L+ +T+NL
Sbjct: 171 LHLFCVLYVVLLHFLTYNL 189


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 21  IFLTCVIYCYSLYIVTHNL 77
           + L CV+Y   L+ +T+NL
Sbjct: 171 LHLFCVLYVVLLHFLTYNL 189


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 217 HGKRTSRPRTIQ 252
           HGK  SRPR IQ
Sbjct: 100 HGKYLSRPRRIQ 111


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 491 VERYDGDGQPMKVQLSTSRVR 553
           ++RYD    PMK   S  R R
Sbjct: 120 IDRYDAIRHPMKFSGSWKRAR 140



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +3

Query: 6   VYLVFIFLTCVIYCYSLYIV 65
           + + F+ ++  I C+S YI+
Sbjct: 250 IKITFVIVSVFILCWSPYII 269


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 2   WSLFGVHIFNLCYILLF 52
           W++   HIF +C  L++
Sbjct: 157 WNILFGHIFTVCRTLIY 173


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 60  IVTHNLKCRAPVLSKSSSGTFLIK 131
           I TH L C+  +  K+ S  +L++
Sbjct: 1   IRTHTLPCKCTICPKAFSRPWLLQ 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,369
Number of Sequences: 336
Number of extensions: 2480
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -