Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021886
         (561 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    25   1.3  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   1.3  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   6.8  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 271 TNSPLSSEWFAADLFVFHVHETVISDDIA 185
           TN P+S E  + DL  +H+HET  +D I+
Sbjct: 664 TNMPMSWE-SSIDLGAYHLHETKNADCIS 691


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
 Frame = +3

Query: 219 WKTNKSAANHSELNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQ 398
           W T++S      +NG  +  Q I+        A     T I    ++ +T  PE R + +
Sbjct: 46  WVTDESKTVAIVVNGNRLPIQRIRHRQTLGVVAADVGGTTIVSCYVSPQTGVPEFRSIME 105

Query: 399 KFGTVVE-CD---IVRNYGFVHLD 458
           K   +V  C    +  ++  +HLD
Sbjct: 106 KIDLIVRGCSRVLLAGDFNAMHLD 129


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 268 NSPLSSEWFAADLFVFHVHETVISDDIAFYD 176
           NS + S W+A  + +  V  +V + ++A YD
Sbjct: 5   NSAVGSRWWAPAMAILAVALSVEAAEVARYD 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,286
Number of Sequences: 2352
Number of extensions: 11220
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)