Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021886
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 58 4e-09
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 47 8e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 45 4e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 45 4e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 45 4e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 45 4e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 45 4e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 45 4e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 45 4e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 42 2e-04
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 42 2e-04
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 42 3e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 42 3e-04
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 42 3e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 42 3e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 42 3e-04
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 40 0.001
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 40 0.001
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 40 0.001
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 39 0.002
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 39 0.003
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 39 0.003
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 39 0.003
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 39 0.003
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 39 0.003
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 39 0.003
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 37 0.009
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 37 0.009
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 36 0.026
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 36 0.026
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 36 0.026
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.035
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 35 0.035
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.035
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 35 0.046
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 34 0.061
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 34 0.061
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 34 0.061
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 34 0.061
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 34 0.061
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 34 0.061
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.11
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 33 0.11
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 33 0.11
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.14
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 33 0.14
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 32 0.25
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 32 0.25
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 32 0.25
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 32 0.32
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 32 0.32
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 31 0.43
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 31 0.43
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 31 0.43
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 31 0.57
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 31 0.57
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 31 0.57
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 31 0.57
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 31 0.75
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 31 0.75
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 31 0.75
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 31 0.75
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 31 0.75
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 31 0.75
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 31 0.75
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 31 0.75
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 31 0.75
U50312-2|AAA92319.2| 477|Caenorhabditis elegans Hypothetical pr... 30 0.99
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 30 0.99
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 1.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 1.3
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.3
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.3
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 30 1.3
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 30 1.3
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 30 1.3
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 29 2.3
AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical ... 29 2.3
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 29 3.0
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 28 4.0
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 28 4.0
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 28 5.3
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 28 5.3
AC006744-2|AAF60505.2| 503|Caenorhabditis elegans Cytochrome p4... 28 5.3
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 27 7.0
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 27 7.0
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 27 9.2
U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical pr... 27 9.2
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 27 9.2
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 27 9.2
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 27 9.2
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 58.0 bits (134), Expect = 4e-09
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +3
Query: 333 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMV 509
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++ DV+ I L G +
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTI 60
Score = 53.2 bits (122), Expect = 1e-07
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQV 235
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E + V
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDV 48
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 58.0 bits (134), Expect = 4e-09
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +3
Query: 333 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMV 509
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++ DV+ I L G +
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTI 60
Score = 53.2 bits (122), Expect = 1e-07
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQV 235
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E + V
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDV 48
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 47.6 bits (108), Expect = 6e-06
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Frame = +3
Query: 255 LNGELVHGQAIKIE-AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 431
+N E++HG+ ++I + + A IF+ NL V + F FG ++ C +
Sbjct: 118 MNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVA 177
Query: 432 -------RNYGFVHLDATGDVNDAIKELNGMMVTD 515
+ YGFVH + AI+++NGM+++D
Sbjct: 178 TDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSD 212
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Frame = +2
Query: 65 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHME 223
+P ++ G G IFI NL + F +G ++ C + + YGFVH E
Sbjct: 136 DPAARRAGNGN--IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFE 193
Query: 224 NE 229
E
Sbjct: 194 TE 195
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 47.6 bits (108), Expect = 6e-06
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Frame = +3
Query: 255 LNGELVHGQAIKIE-AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 431
+N E++HG+ ++I + + A IF+ NL V + F FG ++ C +
Sbjct: 118 MNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVA 177
Query: 432 -------RNYGFVHLDATGDVNDAIKELNGMMVTD 515
+ YGFVH + AI+++NGM+++D
Sbjct: 178 TDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSD 212
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Frame = +2
Query: 65 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHME 223
+P ++ G G IFI NL + F +G ++ C + + YGFVH E
Sbjct: 136 DPAARRAGNGN--IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFE 193
Query: 224 NE 229
E
Sbjct: 194 TE 195
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 47.2 bits (107), Expect = 8e-06
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 222 KTNKSAANHSELNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQK 401
+TN +A +SE N + + + + S KA +T ++VGN++ +T ++R+LF
Sbjct: 207 RTNWAARKNSEENRDKLTFEQV----FNSTKADNT---SVYVGNISQQTTDADLRDLFST 259
Query: 402 FGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVTDSP*RCSCRR 542
+G + E I + Y FV + AI E+NG + + RCS R
Sbjct: 260 YGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVRCSWGR 308
Score = 44.4 bits (100), Expect = 6e-05
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 104 IFIGNLSDKTTEADLRPLFEKYGTVVECDI--VRNYGFVHMENEQ 232
+++GN+S +TT+ADLR LF YG + E I + Y FV E ++
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKE 283
Score = 33.9 bits (74), Expect = 0.080
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Frame = +2
Query: 98 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQ 232
F +F+G+LS + L+ F K+G V E ++R+ YGFV N+Q
Sbjct: 135 FHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQ 187
Score = 32.3 bits (70), Expect = 0.25
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +3
Query: 339 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKEL 494
+FVG+L+ ++ F KFG V E ++R+ YGFV + +AI +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 495 NGMMV 509
NG +
Sbjct: 197 NGKWI 201
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 65 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 294 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.009
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 65 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 294 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.009
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 65 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 294 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.009
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 65 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 294 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.009
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 65 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 294 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.009
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 65 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 294 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.009
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 65 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 294 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.009
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Frame = +3
Query: 294 EAAKSRKAPSTPTT-KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGF 446
E ++R P T +FVG+L + + ++RE F KFG V E I+R+ YGF
Sbjct: 118 EPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGF 177
Query: 447 VHLDATGDVNDAIKELNG 500
V D AI E+NG
Sbjct: 178 VSYPRREDAERAIDEMNG 195
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 74 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
SK + F +F+G+L + LR F K+G V E I+R+
Sbjct: 124 SKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRD 166
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNG 500
+I++G LT + ++ F+ +G + + + +GFV D D DA+ +LNG
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNG 58
Score = 33.9 bits (74), Expect = 0.080
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQ 232
+I+IG L+ + +E D+ F YG + + + +GFV ++++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKR 47
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNG 500
+I++G LT + ++ F+ +G + + + +GFV D D DA+ +LNG
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNG 58
Score = 33.9 bits (74), Expect = 0.080
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQ 232
+I+IG L+ + +E D+ F YG + + + +GFV ++++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKR 47
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNG 500
+I++G LT + ++ F+ +G + + + +GFV D D DA+ +LNG
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNG 58
Score = 33.9 bits (74), Expect = 0.080
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQ 232
+I+IG L+ + +E D+ F YG + + + +GFV ++++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKR 47
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 312 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNDAIK 488
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A +
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKE 168
Query: 489 ELNGMMV 509
++G ++
Sbjct: 169 AIDGRII 175
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 89 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHME 223
TG ++F+GNL ++ E +L+ LF +G + EC + + + F+ ++
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLD 158
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 312 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNDAIK 488
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A +
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKE 168
Query: 489 ELNGMMV 509
++G ++
Sbjct: 169 AIDGRII 175
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 89 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHME 223
TG ++F+GNL ++ E +L+ LF +G + EC + + + F+ ++
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLD 158
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Frame = +3
Query: 297 AAKSRKAPSTPT-----TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YG 443
AA ++ PST + ++ V N+ + R P+++ +F+KFG V + +I+ N +G
Sbjct: 136 AAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFG 195
Query: 444 FVHLDATGDVNDAIKELNGMMVTDSP*RCSC 536
FV ++ D A +EL+G M+ +C
Sbjct: 196 FVTMERPQDAERARQELHGSMIEGRKIEVNC 226
Score = 34.3 bits (75), Expect = 0.061
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Frame = +2
Query: 92 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQ 232
G ++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQ 203
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Frame = +3
Query: 255 LNGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 431
+N E +HG+ ++I ++ A + IF+ NL + + F FG ++ C +
Sbjct: 93 MNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVA 152
Query: 432 -------RNYGFVHLDATGDVNDAIKELNGMMV 509
+ YGFVH + +AI+++NGM++
Sbjct: 153 IDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLL 185
Score = 34.7 bits (76), Expect = 0.046
Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Frame = +3
Query: 84 RAPVLSKSSSGTFLIKPQKPILDRYSKNTVRS*--NAISSEITVS----------CTWKT 227
R P + +S +G IK ++D S S N +S ++ + ++T
Sbjct: 110 RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFET 169
Query: 228 NKSAANH-SELNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEV 383
++A N ++NG L+ G+ + + A ++R+ T T ++V N D +
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 229
Query: 384 RELFQKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELN 497
++F KFG + C+++ + +GFV + A++ L+
Sbjct: 230 EKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 273
Score = 31.5 bits (68), Expect = 0.43
Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Frame = +3
Query: 288 KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGF 446
K E K+ + ++V NL + +++ F+ +G + ++ + +GF
Sbjct: 302 KHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGF 361
Query: 447 VHLDATGDVNDAIKELNGMMVTDSP 521
V + + A+ E+N MV P
Sbjct: 362 VCFEKPEEATSAVTEMNSKMVCSKP 386
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Frame = +3
Query: 297 AAKSRKAPSTPT-----TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YG 443
AA ++ PST + ++ V N+ + R P+++ +F+KFG V + +I+ N +G
Sbjct: 136 AAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFG 195
Query: 444 FVHLDATGDVNDAIKELNGMMVTDSP*RCSC 536
FV ++ D A +EL+G M+ +C
Sbjct: 196 FVTMERPQDAERARQELHGSMIEGRKIEVNC 226
Score = 34.3 bits (75), Expect = 0.061
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Frame = +2
Query: 92 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQ 232
G ++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQ 203
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Frame = +3
Query: 255 LNGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 431
+N E +HG+ ++I ++ A + IF+ NL + + F FG ++ C +
Sbjct: 30 MNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVA 89
Query: 432 -------RNYGFVHLDATGDVNDAIKELNGMMV 509
+ YGFVH + +AI+++NGM++
Sbjct: 90 IDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLL 122
Score = 35.9 bits (79), Expect = 0.020
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Frame = +3
Query: 84 RAPVLSKSSSGTFLIKPQKPILDRYSKNTVRS*--NAISSEITVS----------CTWKT 227
R P + +S +G IK ++D S S N +S ++ + ++T
Sbjct: 47 RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFET 106
Query: 228 NKSAANH-SELNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEV 383
++A N ++NG L+ G+ + + A ++R+ T T ++V N D +
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 166
Query: 384 RELFQKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELN 497
+LF KFG + C+++ + +GFV + A++ L+
Sbjct: 167 EKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 210
Score = 31.5 bits (68), Expect = 0.43
Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Frame = +3
Query: 288 KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGF 446
K E K+ + ++V NL + +++ F+ +G + ++ + +GF
Sbjct: 239 KHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGF 298
Query: 447 VHLDATGDVNDAIKELNGMMVTDSP 521
V + + A+ E+N MV P
Sbjct: 299 VCFEKPEEATSAVTEMNSKMVCSKP 323
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Frame = +3
Query: 255 LNGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 431
+N E +HG+ ++I ++ A + IF+ NL + + F FG ++ C +
Sbjct: 93 MNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVA 152
Query: 432 -------RNYGFVHLDATGDVNDAIKELNGMMV 509
+ YGFVH + +AI+++NGM++
Sbjct: 153 IDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLL 185
Score = 35.9 bits (79), Expect = 0.020
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Frame = +3
Query: 84 RAPVLSKSSSGTFLIKPQKPILDRYSKNTVRS*--NAISSEITVS----------CTWKT 227
R P + +S +G IK ++D S S N +S ++ + ++T
Sbjct: 110 RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFET 169
Query: 228 NKSAANH-SELNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEV 383
++A N ++NG L+ G+ + + A ++R+ T T ++V N D +
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 229
Query: 384 RELFQKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELN 497
+LF KFG + C+++ + +GFV + A++ L+
Sbjct: 230 EKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 273
Score = 31.5 bits (68), Expect = 0.43
Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Frame = +3
Query: 288 KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGF 446
K E K+ + ++V NL + +++ F+ +G + ++ + +GF
Sbjct: 302 KHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGF 361
Query: 447 VHLDATGDVNDAIKELNGMMVTDSP 521
V + + A+ E+N MV P
Sbjct: 362 VCFEKPEEATSAVTEMNSKMVCSKP 386
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLDATGDVNDAIKELNGMM 506
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 507 V 509
+
Sbjct: 64 I 64
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLDATGDVNDAIKELNGMM 506
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 507 V 509
+
Sbjct: 64 I 64
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLDATGDVNDAIKELNGMM 506
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 507 V 509
+
Sbjct: 64 I 64
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 306 SRKAPSTPTTKIFVGNLTDKT-RAPEVRELFQKFGTVVECDIV--RNYGFVHLDATGDVN 476
S K P ++F+GN+ ++ ELF+ FG ++ + + +GFV + G +
Sbjct: 74 SSKDPHMIRARVFIGNIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSAD 133
Query: 477 DAIKELNGM 503
++ + LNGM
Sbjct: 134 ESCRSLNGM 142
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +3
Query: 312 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATG 467
K +T +FVG+L+ + ++RE FQ FG V + ++R+ YGFV
Sbjct: 15 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 74
Query: 468 DVNDAIKELNG 500
+ AI+++NG
Sbjct: 75 EAERAIEQMNG 85
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 321 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKEL 494
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D AI ++
Sbjct: 124 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQM 182
Query: 495 NGMMVTDSP*RCS 533
N V RCS
Sbjct: 183 NNQDVGGQLVRCS 195
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +3
Query: 312 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATG 467
K +T +FVG+L+ + ++RE FQ FG V + ++R+ YGFV
Sbjct: 25 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 84
Query: 468 DVNDAIKELNG 500
+ AI+++NG
Sbjct: 85 EAERAIEQMNG 95
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 321 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKEL 494
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D AI ++
Sbjct: 134 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQM 192
Query: 495 NGMMVTDSP*RCS 533
N V RCS
Sbjct: 193 NNQDVGGQLVRCS 205
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +3
Query: 312 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATG 467
K +T +FVG+L+ + ++RE FQ FG V + ++R+ YGFV
Sbjct: 128 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 187
Query: 468 DVNDAIKELNG 500
+ AI+++NG
Sbjct: 188 EAERAIEQMNG 198
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 321 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKEL 494
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D AI ++
Sbjct: 237 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQM 295
Query: 495 NGMMVTDSP*RCS 533
N V RCS
Sbjct: 296 NNQDVGGQLVRCS 308
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +3
Query: 312 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATG 467
K +T +FVG+L+ + ++RE FQ FG V + ++R+ YGFV
Sbjct: 96 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 155
Query: 468 DVNDAIKELNG 500
+ AI+++NG
Sbjct: 156 EAERAIEQMNG 166
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 321 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKEL 494
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D AI ++
Sbjct: 205 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQM 263
Query: 495 NGMMVTDSP*RCS 533
N V RCS
Sbjct: 264 NNQDVGGQLVRCS 276
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNDAIKELNG 500
K++VGNL R EV ++F K+G + DI G FV + D DA++ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 68
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 86 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREPFR 253
G+ K+++GNL E ++ +F KYG + DI G FV E+ + + R
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNDAIKELNG 500
K++VGNL R EV ++F K+G + DI G FV + D DA++ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 68
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 86 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREPFR 253
G+ K+++GNL E ++ +F KYG + DI G FV E+ + + R
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 37.5 bits (83), Expect = 0.007
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNG 500
++++G L ++ +V F+ +G + + + +GFV D +DA+ +LNG
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNG 57
Score = 31.1 bits (67), Expect = 0.57
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQ 232
+++IG L ++ ++ D+ F YG + + + +GFV ++++
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQR 46
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 37.1 bits (82), Expect = 0.009
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Frame = +3
Query: 222 KTNKSAANHSELNGELVHGQAIKIEAAKSRKAPSTPTTK--IFVGNLTDKTRAPEVRELF 395
+T A + ++ G H Q + A+ + P + T +FV NL+ T + +LF
Sbjct: 335 QTASPPATNGQVAGLAAHAQLSALSASVAATLPPSDTAGYCLFVYNLSSDTDDTLLWQLF 394
Query: 396 QKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKELNG 500
+FG +V I+R+ Y FV + + +A+ LNG
Sbjct: 395 SQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLNG 436
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Frame = +3
Query: 249 SELNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 428
S NG + + IK+ A+ + ++V + E+ +F+ FG ++ I
Sbjct: 101 SSFNGLRLQNKTIKVSYARPSN-DQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRI 159
Query: 429 V--------RNYGFVHLDATGDVNDAIKELNG 500
+ + GFV D + + AIK LNG
Sbjct: 160 LSDNVTGLSKGVGFVRFDKKDEADVAIKTLNG 191
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 37.1 bits (82), Expect = 0.009
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 89 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC 187
TG ++F+GNL ++ E +L+ LF +G + EC
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAEC 145
Score = 35.5 bits (78), Expect = 0.026
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 312 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHL 455
K T ++FVGNL ++ + E++ELF G + EC + + + F+ L
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRL 157
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 35.5 bits (78), Expect = 0.026
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Frame = +2
Query: 89 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQV 235
T T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++V
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEV 187
Score = 34.7 bits (76), Expect = 0.046
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 35.5 bits (78), Expect = 0.026
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +3
Query: 339 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNG 500
+++ N+ + ++ ELF+++ ++ V++Y F+H + D A++E NG
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNG 432
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 35.5 bits (78), Expect = 0.026
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Frame = +2
Query: 89 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQV 235
T T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++V
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEV 187
Score = 34.7 bits (76), Expect = 0.046
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 35.1 bits (77), Expect = 0.035
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 244
+IF+G TTE +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121
Score = 30.7 bits (66), Expect = 0.75
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKEL 494
+IFVG T E+RE F+KF V + +V++ YGF+ + T D + I++L
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE-TEDQAEEIRKL 125
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 35.1 bits (77), Expect = 0.035
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Frame = +3
Query: 246 HSELNGELVHGQAIKIEAAKSRK----APSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 413
+ ++ LVH A + + + + + T TKIFVG L T + E F++FG +
Sbjct: 2 YGQVQDPLVHAAAAALAQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDI 61
Query: 414 VECDIV--------RNYGFVHLDATGDVNDAIKELN 497
E ++ R YGFV + A K+ N
Sbjct: 62 EEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPN 97
Score = 31.5 bits (68), Expect = 0.43
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMEN 226
KIF+G L T++ L FE++G + E ++ R YGFV M++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKD 85
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 35.1 bits (77), Expect = 0.035
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 244
+IF+G TTE +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122
Score = 30.7 bits (66), Expect = 0.75
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKEL 494
+IFVG T E+RE F+KF V + +V++ YGF+ + T D + I++L
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE-TEDQAEEIRKL 126
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.046
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 116 NLSDKTTEADLRPLFEKYGTVVECDIV 196
NLS TTE DLR +F ++G + +CD+V
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLV 108
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Frame = +3
Query: 327 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDA 482
P+ + V NL+ T ++R++F +FG + +CD+V R +GF++ + D A
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 483 IKEL 494
+L
Sbjct: 134 RDKL 137
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.061
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKE 491
KIFVG LT T +RE + +FG + + ++R+ +GFV +V+ A+K+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
KIF+G L+ TT+ +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 34.3 bits (75), Expect = 0.061
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKE 491
KIFVG LT T +RE + +FG + + ++R+ +GFV +V+ A+K+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
KIF+G L+ TT+ +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.061
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKE 491
KIFVG LT T +RE + +FG + + ++R+ +GFV +V+ A+K+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
KIF+G L+ TT+ +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.061
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +2
Query: 98 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 199
F++++ ++ +E DL+ +FE +G +V+C + R
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLAR 240
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.061
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +2
Query: 98 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 199
F++++ ++ +E DL+ +FE +G +V+C + R
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLAR 240
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 34.3 bits (75), Expect = 0.061
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +2
Query: 98 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 199
F++++ ++ +E DL+ +FE +G +V+C + R
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLAR 240
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 217
K+FIG LS TT+ L F ++G VV+ ++R+ H
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 88
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 217
K+FIG LS TT+ L F ++G VV+ ++R+ H
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 108
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 217
K+FIG LS TT+ L F ++G VV+ ++R+ H
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 109
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +2
Query: 104 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREPF 250
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + + F
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAF 299
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Frame = +3
Query: 327 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 482
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 483 IKELNGMMVTD 515
+++ +++ D
Sbjct: 299 FFKMDNVLIDD 309
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 95 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 196
T ++F+ NL T E DL+ LF+KYG V E +V
Sbjct: 278 TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311
Score = 30.3 bits (65), Expect = 0.99
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 95 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 193
T ++ + NL TE LR FEKYG + + +
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASL 34
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Frame = +3
Query: 330 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFVHLDATGDVNDAIK 488
TT++ V NL ++R+ F+K+G + + + R + FV G ++A+
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 489 ELN 497
+ N
Sbjct: 62 KSN 64
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
K+F+G + E DLR LFE++G + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +3
Query: 279 QAIKIEAAKSRKAPSTPTTK-----IFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 434
+A++++ A + P++P K +F+G L+ + EVR LF FG + E ++R
Sbjct: 101 RAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLR 157
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +2
Query: 104 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREPF 250
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + + F
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAF 299
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Frame = +3
Query: 327 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 482
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 483 IKELNGMMVTD 515
+++ +++ D
Sbjct: 299 FFKMDNVLIDD 309
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +2
Query: 104 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREPF 250
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + + F
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAF 230
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Frame = +3
Query: 327 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 482
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
Query: 483 IKELNGMMVTD 515
+++ +++ D
Sbjct: 230 FFKMDNVLIDD 240
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
K+F+G + E DLR LFE++G + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +3
Query: 279 QAIKIEAAKSRKAPSTPTTK-----IFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 434
+A++++ A + P++P K +F+G L+ + EVR LF FG + E ++R
Sbjct: 101 RAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLR 157
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 437
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 32.7 bits (71), Expect = 0.19
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 199
KI + N+S K T++ L+ F +YG + C + R
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 95 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 193
T +F+GN+ E ++R +FE++G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 330 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 428
T +FVGN+ + E+R +F++ G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 95 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 193
T +F+GN+ E ++R +FE++G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 330 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 428
T +FVGN+ + E+R +F++ G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 95 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 193
T +F+GN+ E ++R +FE++G V E DI
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 177
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 330 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 428
T +FVGN+ + E+R +F++ G V E DI
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 177
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 31.9 bits (69), Expect = 0.32
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 92 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
G + I NLS +TT DLR FE+YG + + I R+
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRD 53
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 31.9 bits (69), Expect = 0.32
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 92 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
G + I NLS +TT DLR FE+YG + + I R+
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRD 53
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 31.5 bits (68), Expect = 0.43
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Frame = +3
Query: 339 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKEL 494
+FVGN++ +R +F K G V+ +V + YGF+ AI+ L
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 495 NG 500
NG
Sbjct: 80 NG 81
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
Frame = +2
Query: 104 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREPFR 253
+F+GN+S +E +R +F K G V+ +V + YGF+ + Q R
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIR 77
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 31.5 bits (68), Expect = 0.43
Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Frame = +3
Query: 288 KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGF 446
K E K+ + ++V NL + +++ F+ +G + ++ + +GF
Sbjct: 242 KHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGF 301
Query: 447 VHLDATGDVNDAIKELNGMMVTDSP 521
V + + A+ E+N MV P
Sbjct: 302 VCFEKPEEATSAVTEMNSKMVCSKP 326
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +3
Query: 333 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNDAIKEL 494
T ++V N D + +LF KFG + C+++ + +GFV + A++ L
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 212
Query: 495 N 497
+
Sbjct: 213 H 213
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = +2
Query: 104 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQ 232
+++ N D + L LF K+G + C+++ + +GFV N +
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPE 203
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +3
Query: 387 ELFQKFGT----VVECDIVRNYGFVHLDATGDVNDAIKELNG 500
EL+Q FG VV+C + YGFV D + I E++G
Sbjct: 111 ELYQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDG 152
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 31.1 bits (67), Expect = 0.57
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Frame = +2
Query: 83 PGTGTFK-IFIGNLSDKTTEADLRPLFE-----KYGTVVECDIV-RNYGFVHMENEQVGR 241
PGT + IF+ NL TTE ++R E ++ D+V R + +V MEN+Q +
Sbjct: 587 PGTEDARTIFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQ 646
Query: 242 E 244
+
Sbjct: 647 Q 647
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTV 178
K+F+ N+ + T+ +L+ LF K+GTV
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTV 709
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 333 TKIFVGNLTDKTRAPEVRELFQKFGTV 413
+K+FV N+ + E++ LF KFGTV
Sbjct: 683 SKVFVRNVHFQATDDELKALFSKFGTV 709
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 31.1 bits (67), Expect = 0.57
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Frame = +3
Query: 300 AKSRKAPS----TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV---------RNY 440
A R++P+ +P ++ + NL+ + E+F +G + D+ R Y
Sbjct: 118 ASPRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGY 177
Query: 441 GFVHLDATGDVNDAIKELNG 500
G+V D D +IK ++G
Sbjct: 178 GYVEYDNLEDAEKSIKHMDG 197
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 264 ELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 413
+ + G++++++ AKSR+ K+FVG L ++R F++FG V
Sbjct: 92 QTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
Score = 30.7 bits (66), Expect = 0.75
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECD--------IVRNYGFVHMENEQ 232
K+F+G L +E DLR FE++G V + + RN+ F+ E E+
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEE 162
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI 193
KIF+G +S + DL F +YG V + +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQV 60
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 264 ELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 413
+ + G++++++ AKSR+ K+FVG L ++R F++FG V
Sbjct: 92 QTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
Score = 30.7 bits (66), Expect = 0.75
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECD--------IVRNYGFVHMENEQ 232
K+F+G L +E DLR FE++G V + + RN+ F+ E E+
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEE 162
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 101 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI 193
KIF+G +S + DL F +YG V + +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQV 60
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 155 LFEKYGTVVECDIVRNYGFVHMENEQVGREPFRT*RRV 268
L + +V + + V +Y +HMEN++ GR+ ++T R++
Sbjct: 512 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTLRQI 549
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 155 LFEKYGTVVECDIVRNYGFVHMENEQVGREPFRT*RRV 268
L + +V + + V +Y +HMEN++ GR+ ++T R++
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTLRQI 548
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 155 LFEKYGTVVECDIVRNYGFVHMENEQVGREPFRT*RRV 268
L + +V + + V +Y +HMEN++ GR+ ++T R++
Sbjct: 514 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTLRQI 551
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 155 LFEKYGTVVECDIVRNYGFVHMENEQVGREPFRT*RRV 268
L + +V + + V +Y +HMEN++ GR+ ++T R++
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTLRQI 548
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 155 LFEKYGTVVECDIVRNYGFVHMENEQVGREPFRT*RRV 268
L + +V + + V +Y +HMEN++ GR+ ++T R++
Sbjct: 512 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTLRQI 549
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 155 LFEKYGTVVECDIVRNYGFVHMENEQVGREPFRT*RRV 268
L + +V + + V +Y +HMEN++ GR+ ++T R++
Sbjct: 514 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTLRQI 551
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 155 LFEKYGTVVECDIVRNYGFVHMENEQVGREPFRT*RRV 268
L + +V + + V +Y +HMEN++ GR+ ++T R++
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTLRQI 548
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 155 LFEKYGTVVECDIVRNYGFVHMENEQVGREPFRT*RRV 268
L + +V + + V +Y +HMEN++ GR+ ++T R++
Sbjct: 512 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTLRQI 549
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 155 LFEKYGTVVECDIVRNYGFVHMENEQVGREPFRT*RRV 268
L + +V + + V +Y +HMEN++ GR+ ++T R++
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTLRQI 548
>U50312-2|AAA92319.2| 477|Caenorhabditis elegans Hypothetical
protein B0222.2 protein.
Length = 477
Score = 30.3 bits (65), Expect = 0.99
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +3
Query: 288 KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATG 467
K++ + RK PS K +V L D+TR + R + + F T ++ GF H
Sbjct: 278 KLQNVQQRKTPSGKIRKFYVWLLPDRTRV-DGRNITKLFST-IQVFTACFAGFAH--GAN 333
Query: 468 DVNDAIKEL 494
DV++AI L
Sbjct: 334 DVSNAIAPL 342
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 30.3 bits (65), Expect = 0.99
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 104 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
I+IG LS +E D+ +F +YG V+ +++R+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRD 72
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 255 LNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 419
LN ++G+ IK+ A + + IFVGNL + + + F FG +++
Sbjct: 74 LNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 255 LNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 419
LN ++G+ IK+ A + + IFVGNL + + + F FG +++
Sbjct: 84 LNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 138
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 339 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 446
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 339 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 446
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 29.9 bits (64), Expect = 1.3
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +3
Query: 12 LVFIFLTCVIYCYSLYIVTHNLKCR 86
L+F F++C ++ Y++Y+V H + +
Sbjct: 104 LIFFFISCTMFLYAVYLVKHETELK 128
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 339 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 446
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 107 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 144
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 339 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 446
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 267 LVHGQAIKIEAAKSRKAPSTPT-TKIFVGNLTDKTRAPEVRELF 395
++ G+ ++ R P+ ++IFVG LTDK ++R++F
Sbjct: 236 MIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVF 279
Score = 27.5 bits (58), Expect = 7.0
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +3
Query: 321 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR-------NYGFVHLDATGDVND 479
S P I +G + KT ++ F+ GTVV C+I R +GFV + + G+ N
Sbjct: 170 SQPVDLIVLG-VDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNK 228
Query: 480 AI 485
+
Sbjct: 229 VL 230
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 7/40 (17%)
Frame = +2
Query: 128 KTTEADLRPLFEKYGTVVECDIVR-------NYGFVHMEN 226
KTT+ + FE GTVV C+I R +GFV M +
Sbjct: 183 KTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS 222
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +3
Query: 303 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI-----VRNYGFVHLDATG 467
+ K P +++ NL K E+ E+F KFG V + + R FV +
Sbjct: 9 RGAKLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIF 68
Query: 468 DVNDAIKELNGMMVTD 515
D A + L+G V++
Sbjct: 69 DAKTACEHLSGYNVSN 84
>AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical
protein Y52D5A.1 protein.
Length = 914
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 23 IFNLCYILLFFVHSNP*SKMPGTGTFKI-FIGNL 121
IF+L I +F SN K+P +GTF + +IGN+
Sbjct: 615 IFDLPVIYIFLKMSNSIFKLPASGTFVLMYIGNV 648
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 104 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 202
+F+G ++ +T+E+ LR FE YG + + +V +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHD 138
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 89 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 196
+G F +++GN +TTE +L F G + IV
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIV 37
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 276 GQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 413
GQ + + +K S+P +FVGN++DK +R++ + G V
Sbjct: 31 GQHTPAQQSSQQKPDSSP---VFVGNISDKCSDEFIRKILNECGNV 73
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 276 GQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 413
GQ + + +K S+P +FVGN++DK +R++ + G V
Sbjct: 31 GQHTPAQQSSQQKPDSSP---VFVGNISDKCSDEFIRKILNECGNV 73
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Frame = +3
Query: 339 IFVGNLTDKTRAPEVRELFQKFGTVVECDI--------VRNYGFVHLDATGDVNDAIKEL 494
+F+GN+ + E+ E F+ G +V+ I +N+ ++ D + + +A+ +
Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VM 115
Query: 495 NGMMVTDSP*RCSCRRV-VSGSG 560
NG + P + +R + G G
Sbjct: 116 NGSLFRSRPIVVTAKRTNIPGMG 138
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 98 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 196
F +++GN +TTE DL F + G V IV
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIV 36
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 291 IEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 413
++ + +R + + +FVGN+ VR +F FGT+
Sbjct: 129 LQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTI 169
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 104 IFIGNLSDKTTEADLRPLFEKYGTV--VECDIVRNYGFV 214
+F+ N+ ++ TE D+ F +YG + + ++ R GF+
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFL 95
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 339 IFVGNLTDKTRAPEVRELFQKFGTVVECDI--------VRNYGFVHLDATGDVNDAIKEL 494
+F+GN+ + EV E F+ G +V I +N+ ++ D + + +A+ +
Sbjct: 63 VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VM 121
Query: 495 NGMMVTDSP*RCSCRRV-VSGSG 560
NG + P + +R + G G
Sbjct: 122 NGSLFRSRPIVVTAKRTNIPGMG 144
>AC006744-2|AAF60505.2| 503|Caenorhabditis elegans Cytochrome p450
family protein 29A3 protein.
Length = 503
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Frame = -2
Query: 554 AGHDSSTTAPSWA---VRHHHTVQ--LFDSVVHIARRVQMHEAVVTHDI-ALDDRPELLK 393
AGHD++TT+ SW + HH +Q +++ +V + +E V T I L+ +LK
Sbjct: 310 AGHDTTTTSVSWVCWNLAHHPDIQQNVYEEIVSVFGE-DPNEDVTTEGIKKLEYTERMLK 368
Query: 392 Q 390
+
Sbjct: 369 E 369
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 198 EITVSCTWKTNKSAANHSELNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAP 377
E+ V+ T S +HS+++ + G K A KAPS+P + LT +AP
Sbjct: 158 EVVVTAPSPTPSSKKSHSKVSS--LSGS--KTSLASGEKAPSSPLRQRIASFLTPTKKAP 213
Query: 378 EV 383
++
Sbjct: 214 KL 215
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 198 EITVSCTWKTNKSAANHSELNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAP 377
E+ V+ T S +HS+++ + G K A KAPS+P + LT +AP
Sbjct: 158 EVVVTAPSPTPSSKKSHSKVSS--LSGS--KTSLASGEKAPSSPLRQRIASFLTPTKKAP 213
Query: 378 EV 383
++
Sbjct: 214 KL 215
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 491
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 350
Query: 492 LNGMMVTD 515
LNGM + D
Sbjct: 351 LNGMQLGD 358
>U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical
protein SSSD1.1 protein.
Length = 636
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +3
Query: 126 IKPQKPILDRYSKNTVRS*NAISSEITVS---CTWKTNKSAANHSELNGELV 272
IKP+K ++ ++SK R +S+++ V+ +K+A H ++ +L+
Sbjct: 9 IKPKKSVVTKFSKQPTRPEKGLSAKLVVNVPPVIISPSKNAIIHKKVGADLI 60
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 491
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 350
Query: 492 LNGMMVTD 515
LNGM + D
Sbjct: 351 LNGMQLGD 358
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 491
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 325
Query: 492 LNGMMVTD 515
LNGM + D
Sbjct: 326 LNGMQLGD 333
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Frame = +3
Query: 336 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 491
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 328
Query: 492 LNGMMVTD 515
LNGM + D
Sbjct: 329 LNGMQLGD 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,277,546
Number of Sequences: 27780
Number of extensions: 245094
Number of successful extensions: 931
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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