Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021884
(688 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 52 6e-07
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 52 6e-07
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 34 0.094
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 32 0.50
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 32 0.50
SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05) 31 0.66
SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021) 31 0.66
SB_44281| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_26979| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0.017) 30 1.5
SB_20860| Best HMM Match : HTH_10 (HMM E-Value=4.1) 30 1.5
SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05) 30 1.5
SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07) 30 1.5
SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 30 2.0
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 30 2.0
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 29 4.7
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_44265| Best HMM Match : DUF1032 (HMM E-Value=4e-06) 28 8.1
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +1
Query: 364 SFYLFKMPLFSGRCISTVQLVGKTALITGCNTGIGKETALDFYKRGARAL 513
S +LF+ L RC +TV+L GKT ++TG N+GIGK TAL+ +RGAR +
Sbjct: 47 SIWLFRRYLVGRRCTNTVRLHGKTVIVTGANSGIGKATALELARRGARVI 96
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +3
Query: 510 IMACRSLERAEEAKADIEKSCNNINETGHLIIAKCDLTSLKSVREFAQNILDTEPQINI 686
IMACR LE AE+A ++I ++ DL SL SVR+FA++++ E +++I
Sbjct: 96 IMACRDLESAEKAASEIRYKVPK----AEVVCRFLDLNSLISVRKFAEDVMREEKRLDI 150
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1
Query: 403 CISTVQLVGKTALITGCNTGIGKETALDFYKRGARAL 513
C S +L GKT +ITG TGIGKETA+D KRGAR +
Sbjct: 29 CTSEARLDGKTVIITGATTGIGKETAVDLAKRGARVI 65
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +3
Query: 510 IMACRSLERAEEAKADIEKSCNNINETGHLIIAKCDLTSLKSVREFAQNILDTEPQINI 686
I+ R+L+R A DI+ S + + + DL SL SVR+FA+ I E +++I
Sbjct: 65 IIGARNLDRGNAAVRDIQASSGS----QQVFVEHLDLASLSSVRKFAEVINKKEERVDI 119
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1
Query: 403 CISTVQLVGKTALITGCNTGIGKETALDFYKRGARAL 513
C S +L GKT +ITG TGIGKETA+D KRGAR +
Sbjct: 29 CTSEARLDGKTVIITGATTGIGKETAVDLAKRGARVI 65
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 510 IMACRSLERAEEAKADIEKSCNNINETGHLIIAKCDLTSLKSVREFAQNILDTEPQINI 686
I+ R+L+R A DI+ + + + DL SL SVR+FA+ + + E +I+I
Sbjct: 65 IIGARNLDRGNTAVRDIQSRSGS----QQVFVEHLDLASLSSVRKFAEVMNNKEERIHI 119
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/64 (31%), Positives = 39/64 (60%)
Frame = +3
Query: 495 KRCSCIMACRSLERAEEAKADIEKSCNNINETGHLIIAKCDLTSLKSVREFAQNILDTEP 674
++ IMACR + + +A A+I +S N++ + + K DL S S+REFA+ + + E
Sbjct: 95 RKARVIMACRDVHKGMKAAAEIVQSAGNMD----VEVKKLDLASFASIREFAKEVNEEES 150
Query: 675 QINI 686
++++
Sbjct: 151 RVDV 154
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 391 FSG-RCISTVQLVGKTALITGCNTGIGKETALDFYKRGARAL 513
+SG C S +L GKT +ITG N+GIG E A D R AR +
Sbjct: 59 YSGANCSSDEKLKGKTVIITGANSGIGMEVARDLAWRKARVI 100
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 34.3 bits (75), Expect = 0.094
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 421 LVGKTALITGCNTGIGKETALDFYKRGAR-ALWHV 522
L G+T LITG +GIG+ TAL K+G + LW +
Sbjct: 33 LRGETVLITGAASGIGRLTALILAKKGCKLVLWDI 67
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 403 CISTVQLVGKTALITGCNTGIGKETALDFYKRGARAL 513
C T+ L ALI G +GIG+ TA+ + GARA+
Sbjct: 280 CFLTMLLEKVVALIAGGASGIGRATAIRLIRAGARAV 316
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 415 VQLVGKTALITGCNTGIGKETALDFYKRGA 504
++ G+ L+TG G+G++ AL F +RGA
Sbjct: 6 IRFDGRVVLVTGAGNGLGRQYALAFAERGA 35
>SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05)
Length = 493
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 430 KTALITGCNTGIGKETALDFYKRGA 504
++ +ITG N+GIGKETA K GA
Sbjct: 44 RSFMITGANSGIGKETARALAKSGA 68
>SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021)
Length = 181
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 430 KTALITGCNTGIGKETALDFYKRGA 504
++ +ITG N+GIGKETA K GA
Sbjct: 44 RSFMITGANSGIGKETARALAKSGA 68
>SB_44281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -3
Query: 587 FIYIITGLFNVXXXXXXXX*AATCHNARAPLL*KSRAVSFPIPVLQPVISAVLPTNCTVL 408
F+YI + LF V AA C A AP L +RA + +P L P A
Sbjct: 9 FLYIFSALFIVVVMILRAALAAACAPASAPALSPARAPA-SLPALAPETEAARSPEVAPA 67
Query: 407 IHR 399
+H+
Sbjct: 68 LHQ 70
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 418 QLVGKTALITGCNTGIGKETALDFYKRGARAL 513
+L GKT ITG + GIGK A+ + GA +
Sbjct: 2 KLAGKTVFITGASRGIGKAIAVKVARDGANVV 33
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 430 KTALITGCNTGIGKETALDFYKRG 501
K LITGC+TG G++TA+ + G
Sbjct: 34 KYVLITGCDTGFGRDTAIRLNQMG 57
>SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 510 IMACRSLERAEEAKADIEKSCNNINETGHLIIAKCDLTSLKSVREF 647
+MACR +E+A +A+ I+K+ N+ L + DL S S+ +F
Sbjct: 121 VMACRDMEKAHKAELHIKKT----NKDCKLEVMFVDLASFASIHDF 162
>SB_26979| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0.017)
Length = 453
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 421 LVGKTALITGCNTGIGKETALDFYKRGA 504
L GK L+TG + GIGK AL K GA
Sbjct: 50 LSGKVCLVTGASRGIGKGIALMLGKAGA 77
>SB_20860| Best HMM Match : HTH_10 (HMM E-Value=4.1)
Length = 110
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 430 KTALITGCNTGIGKETALDFYKRG 501
K LITGC+TG G++TA+ + G
Sbjct: 34 KYVLITGCDTGFGRDTAIRLDQMG 57
>SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05)
Length = 233
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 418 QLVG--KTALITGCNTGIGKETALDFYKRGARAL 513
QL+G K LITG ++G+G+ETA+ K G L
Sbjct: 36 QLIGADKFVLITGSSSGMGRETAIALDKLGFHVL 69
>SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07)
Length = 621
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 498 RCSCIMACRSLERAEEAKADIEKSCNNINETGHLIIAKCDLTSLKSVRE 644
R +C C + ER + K + CN I + + +KC++TS RE
Sbjct: 156 RLTCHNRCGASERTTQQKCYCDVICNEIGDCCYDYRSKCNITSTAPRRE 204
>SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 427 GKTALITGCNTGIGKETALDFYKRGAR 507
GK ITG ++GIG+ A +F K G++
Sbjct: 870 GKVVWITGASSGIGEHLAYEFTKHGSK 896
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 439 LITGCNTGIGKETALDFYKRGAR 507
LITG +GIGK A++F K GA+
Sbjct: 57 LITGAGSGIGKGMAIEFAKIGAK 79
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 427 GKTALITGCNTGIGKETALDFYKRGARAL 513
GK A++TG TGIGK A + G++ +
Sbjct: 16 GKVAIVTGGGTGIGKAIAAELLSLGSKVV 44
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 430 KTALITGCNTGIGKETALDFYKRGAR 507
K A+ITGC++GIG TA K G +
Sbjct: 4 KVAVITGCSSGIGLATASILAKDGEK 29
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 409 STVQLVGKTA--LITGCNTGIGKETALDFYKRGAR 507
ST+ L+ A LITGC+TGIG AL K R
Sbjct: 188 STLNLLRSVAIVLITGCSTGIGLAAALLLAKDDGR 222
>SB_44265| Best HMM Match : DUF1032 (HMM E-Value=4e-06)
Length = 1073
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 173 AASYYSTDTEYRYGYKRHTYLRS*LFGIDILDKFNLSFTQQPRQRESVVSLLHSS 337
+A++Y + G HT++ GID+L +F L F + P + V L++SS
Sbjct: 510 SATFYKSFEVEEKGLHSHTWMHVCAQGIDVLCRFPL-FPKSPDKVNKVRRLVNSS 563
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,006,748
Number of Sequences: 59808
Number of extensions: 375694
Number of successful extensions: 825
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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