Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021883
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 130 1e-30
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 8e-29
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 65 4e-11
SB_4844| Best HMM Match : G-alpha (HMM E-Value=3.6e-10) 51 9e-07
SB_58122| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17) 36 0.029
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 34 0.088
SB_46992| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_8164| Best HMM Match : rve (HMM E-Value=0.00069) 30 1.9
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 29 2.5
SB_45391| Best HMM Match : DUF1509 (HMM E-Value=1.9) 29 2.5
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 4.4
SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_16817| Best HMM Match : zf-CCCH (HMM E-Value=0.15) 29 4.4
SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012) 29 4.4
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 4.4
SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058) 28 5.8
SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9) 28 5.8
SB_30396| Best HMM Match : M20_dimer (HMM E-Value=4e-08) 28 5.8
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 28 7.6
SB_23583| Best HMM Match : TSP_1 (HMM E-Value=0.095) 28 7.6
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 130 bits (314), Expect = 1e-30
Identities = 70/114 (61%), Positives = 85/114 (74%), Gaps = 1/114 (0%)
Frame = +2
Query: 167 MGCAQSAEERAADC-SKQIDR*ELEREWYSASKDIKLLLLGAGESGKSTIVKQMKIIHES 343
MGC SAEERAA SK I++ L+ E A +D+KLLLLGAGESGKSTIVKQM+IIH+
Sbjct: 1 MGCTLSAEERAAIARSKAIEK-NLKLEGARAERDVKLLLLGAGESGKSTIVKQMRIIHDH 59
Query: 344 GFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNRDRESDGKMVFDVIQR 505
GF+ ED+ QYRP+V+SNTI SL+ I+RAM L I + N R D K+VFDVI R
Sbjct: 60 GFSPEDYIQYRPLVFSNTIYSLLTIIRAMDKLRIDFENDARLMDAKLVFDVIAR 113
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +1
Query: 508 EDTEPFSEELLAAMKRLWADSGVQECFGRSNEYQLNDSAKYFLNDLDRL 654
+DTEPF+ EL +M+RLW D+GVQ+CF RS EYQL DSAKY+L+ L R+
Sbjct: 115 DDTEPFTPELTESMERLWKDAGVQQCFHRSREYQLGDSAKYYLDSLQRI 163
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 124 bits (298), Expect = 8e-29
Identities = 63/109 (57%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
Frame = +2
Query: 167 MGCAQSAEERAA-DCSKQIDR*ELEREWYSASKDIKLLLLGAGESGKSTIVKQMKIIHES 343
MGC SAE++AA + SK ID+ L + A++++KLLLLGAGESGKSTIVKQMKIIHE
Sbjct: 1 MGCTLSAEDKAAAERSKMIDK-NLRADGERAAREVKLLLLGAGESGKSTIVKQMKIIHEH 59
Query: 344 GFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNRDRESDGKMVF 490
G++ E+ QY+ VVYSNTIQS++AI+RAM L I +G+ DR D + +F
Sbjct: 60 GYSTEECTQYKQVVYSNTIQSMIAIIRAMGTLKIEFGHPDRADDAREMF 108
Score = 74.1 bits (174), Expect = 9e-14
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = +1
Query: 508 EDTEPFSEELLAAMKRLWADSGVQECFGRSNEYQLNDSAKYFLNDLDRL 654
ED + F+ EL++ MKRLW+DSG+Q CF RS EYQLNDSA Y+LN LDRL
Sbjct: 115 EDVK-FTAELISIMKRLWSDSGIQACFARSREYQLNDSASYYLNALDRL 162
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 76.6 bits (180), Expect = 2e-14
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +2
Query: 167 MGCAQSAEERAAD-CSKQIDR*ELEREWYSASKDIKLLLLGAGESGKSTIVKQMKIIHES 343
M C S E + + +I++ ++ ++ + +++KLLLLG GESGKST +KQM+IIH
Sbjct: 1 MDCCLSEEAKERKRINAEIEK-QIRQDKRNQRRELKLLLLGTGESGKSTSIKQMRIIHGQ 59
Query: 344 GFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIY 451
G+++ED + Y P+VY N I ++ ++ RAM L I Y
Sbjct: 60 GYSDEDKRGYIPLVYQNIITAMHSLTRAMETLKIPY 95
Score = 64.5 bits (150), Expect = 7e-11
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +1
Query: 523 FSEELLAAMKRLWADSGVQECFGRSNEYQLNDSAKYFLNDLDRL 654
F E A K LW+D+G+QEC+ R EYQL+DSAKY+L DLDRL
Sbjct: 118 FEREYYEATKSLWSDAGMQECYDRRREYQLSDSAKYYLTDLDRL 161
>SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/103 (37%), Positives = 64/103 (62%)
Frame = +2
Query: 179 QSAEERAADCSKQIDR*ELEREWYSASKDIKLLLLGAGESGKSTIVKQMKIIHESGFTNE 358
+ AE+RA S++ID+ ++ +E + +K+LLLGAGESGKST +KQM+II+ F +
Sbjct: 219 EEAEQRAQ--SQKIDK-QIAQEKAQLRRQVKILLLGAGESGKSTFLKQMRIIYGKDFDAD 275
Query: 359 DFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNRDRESDGKMV 487
++Y+PVVYSN ++ + + A L I + D E + +
Sbjct: 276 ALQEYKPVVYSNILKGMKVLADARRKLRIDWDAPDNEMHAERI 318
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = +1
Query: 511 DTEPFSEELLAAMKRLWADSGVQECFGRSNEYQLNDSAKYFLNDLDRL 654
DTE F + +++RLW D+G+++ F R E+QL DS +YFL+ LDR+
Sbjct: 328 DTE-FFLQYAESVRRLWTDAGIRDSFDRRREFQLGDSTRYFLDHLDRI 374
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 65.3 bits (152), Expect = 4e-11
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +2
Query: 233 LEREWYSASKDIKLLLLGAGESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLV 412
L++E S++I+LL L +G SGKST +KQ+KI+++ GF ++ +YRP VY ++
Sbjct: 30 LDQERERKSQEIQLLTLVSGNSGKSTFIKQLKIVYDDGFNEKERLEYRPQVYRLLAGNIA 89
Query: 413 AILRAMPNLGIIYGNRD 463
I RA+ LG+ + + D
Sbjct: 90 KITRAVEQLGLHFNSHD 106
>SB_4844| Best HMM Match : G-alpha (HMM E-Value=3.6e-10)
Length = 290
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/58 (44%), Positives = 35/58 (60%)
Frame = +1
Query: 481 DGVRRDSTDEDTEPFSEELLAAMKRLWADSGVQECFGRSNEYQLNDSAKYFLNDLDRL 654
D V +T D + + E K LW D+GV EC+ RSNEYQL D A+YFL+ +D +
Sbjct: 224 DYVHEVATAPDFD-YPPEFYEHTKILWQDAGVLECYERSNEYQLIDCAQYFLDRVDTI 280
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 284 GAGESGKSTIVKQMKIIHE-SGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNL 439
GAGESGKSTIVKQM+I+H+ GFT + +Q + N +++ I AM L
Sbjct: 156 GAGESGKSTIVKQMRILHDVHGFTELEKRQKIEDIKKNIRDAILTITGAMSTL 208
>SB_58122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = +2
Query: 302 KSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNRD 463
KST +KQ+KI+++ GF ++ +YRP VY ++ I RA+ LG+ + + D
Sbjct: 2 KSTFIKQLKIVYDDGFNEKERLEYRPQVYRLLAGNIAKITRAVEQLGLHFNSHD 55
>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
Length = 1860
Score = 35.9 bits (79), Expect = 0.029
Identities = 26/76 (34%), Positives = 37/76 (48%)
Frame = -1
Query: 282 NNNSLMSFDAEYHSLSSSYRSICFEQSAARSSADWAHPISAVLPMLWPQAAPTPEPGALS 103
++N ++ ++ HS +RS E+ A S A + H A LP L P + PTP P
Sbjct: 109 SSNEGVNVMSKSHSTEDFHRSA--EEQAMYSYA-YEH---AFLPPLAPSSGPTPSPPPTK 162
Query: 102 PISQHALYTRPVAPAL 55
P LYT P A A+
Sbjct: 163 PQEDPTLYTEPCANAV 178
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 34.3 bits (75), Expect = 0.088
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = -1
Query: 189 SADWAHPISAVLP--MLWPQAAP-TPEPGALSPISQHALYTRP---VAPAL--PEPPYTI 34
+A W P A LP + PQAAP TP GA P ++ P V P + P PP ++
Sbjct: 284 AAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPETEQPQMVAPSSTVTPPVTEPAPPSSV 343
Query: 33 LAP 25
+AP
Sbjct: 344 VAP 346
>SB_46992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 353 NEDFKQYRPVVYSNTIQSLVAILRAM--PNLGIIYGNRDR--ESDGKMVFDVIQRMRTRN 520
N D++Q RP++ S +L+ L+ + P + +++ R R E D K++F R RN
Sbjct: 86 NNDYEQLRPLLLSRPQPALLRPLKPLYSPVIRVLHRERTRRGEVDNKVLFCAWNNKRCRN 145
Query: 521 RSV 529
V
Sbjct: 146 GDV 148
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -1
Query: 198 ARSSADWAHPI--SAVLPMLWPQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAP 25
A +A A P+ +A PML P AP P P A H++ + P PP + P
Sbjct: 1373 ATMAAPCAPPVMMAAPAPMLAPMLAPMPAPCAPPECHTHSVQVKQTHHMAPAPPPPMAFP 1432
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 216 CFEQSAARS-SADWA-HPISAVLPMLWPQAAPTPEPGALSPISQHALYTRPVAPALPEPP 43
C QS + WA P+SA LPM AAP P + + H + V P P PP
Sbjct: 1469 CHVQSTQHTVDHSWAPSPVSAPLPM----AAPPSPPQRIHHV--HTIVHHHVHPPPPAPP 1522
Query: 42 YTILAP 25
+ P
Sbjct: 1523 PPVCMP 1528
>SB_8164| Best HMM Match : rve (HMM E-Value=0.00069)
Length = 1117
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = -3
Query: 193 LFGRLGAPHIGSSPYAMAAGRPDSRAGRALTDLSACALHASCRSGTTGATLHDISTQYTN 14
L L + +I ++ G R GR L L+ ALH + T GA+ H+++TQ N
Sbjct: 529 LHNDLVSDYIINNELRTLCGSLSLRCGR-LMSLALGALHVARHVNTNGASTHELATQMRN 587
>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 519
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -1
Query: 129 PTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNTRT*QY 4
P EP +P AL + P P P P T P TRT QY
Sbjct: 46 PLREPPTPAPTPPPALPSTPTLPLAPRPRPTASQPTTRT-QY 86
>SB_45391| Best HMM Match : DUF1509 (HMM E-Value=1.9)
Length = 402
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 207 QSAARSSADWAHPISAVLPMLWPQAAPTPEPGALSPISQHALY 79
Q +A++S A I L + Q+AP P P L P++Q L+
Sbjct: 160 QVSAKASVPTAEQILGKLLGMASQSAPAPAPAPLYPLAQQQLF 202
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -1
Query: 135 AAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNT 19
AAP L + Q A VAP P+ P T LAP T
Sbjct: 178 AAPVTTMKLLLCLRQQAASETTVAPETPDAPATTLAPET 216
>SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 171 PISAVLPMLWPQAAPTPEPGALSPISQHALYTRPVAPALPEPP 43
P+ P QA+ TP+P A +P + + +RP+ LP PP
Sbjct: 35 PLECTEPSSVLQASITPKP-ATAPTTTTQVRSRPLPTILPAPP 76
>SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2142
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +3
Query: 72 DACRAHAERSVRARPARESGRPAAIA*GELPIWGAPSRPKSVQRTARSKLI 224
+ C+ + E SG + +PI PSRPK + R R K I
Sbjct: 424 ETCKENGESDSACTSVTRSGCQVRLFPLTIPIKALPSRPKQMARRGRGKTI 474
>SB_16817| Best HMM Match : zf-CCCH (HMM E-Value=0.15)
Length = 794
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 141 PQAAPTPEPG--ALSPISQHALYTRPVAPALPEPPYTILAPNTR 16
PQ PE +L P+S H+++ P++ PP ++ P+ R
Sbjct: 602 PQVGSYPEGSFPSLPPVSSHSMFQHQPHPSMACPPTMMVTPDGR 645
>SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)
Length = 1348
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 302 KSTIVKQMKIIHESGFTNEDFKQYRPVV 385
KS I + +H SG +E FKQYR V
Sbjct: 997 KSLIASRQAALHNSGKESEAFKQYRNAV 1024
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 141 PQAAPTPEPGALSPISQHALYTRPVAPALPEPP 43
P AP+P P SP ++ P+APA PP
Sbjct: 120 PSQAPSPPPPPTSPATRAPPPPPPIAPATGGPP 152
>SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058)
Length = 333
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +2
Query: 302 KSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNRDRESDGK 481
K T+V ++ + S FK++ V NT Q+ ++ +P + YG R E G
Sbjct: 248 KFTMVFKVLNVMASDHLMAKFKRFADVHLKNTRQAKNDLV--LPRIKHNYGKRTFEYSGA 305
Query: 482 MVFDVIQRMRTRNRSVRSFS 541
+++ + R RSV SF+
Sbjct: 306 KLWNSLPRETKECRSVGSFA 325
>SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9)
Length = 233
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = -1
Query: 129 PTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNTRT*QY 4
P P PG +P + +P P PP L P + Y
Sbjct: 123 PPPPPGVFTPPPPYRTTAKPKGPTKKPPPMMSLTPTPKKKHY 164
>SB_30396| Best HMM Match : M20_dimer (HMM E-Value=4e-08)
Length = 489
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 122 GVGAACGHSIGRTADMGCA 178
G+G ACGH++ A +GCA
Sbjct: 182 GIGHACGHNLISEAGVGCA 200
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 141 PQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNT 19
P A+P P P A+ P H + + P A P P + AP T
Sbjct: 344 PAASPAPSPSAVKPF--HPVSSAPSAIKFPAKP-NVPAPGT 381
>SB_23583| Best HMM Match : TSP_1 (HMM E-Value=0.095)
Length = 520
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 61 RSDRTRVERMLRDR*ERARLGSRGGLRP*HRENCRYGVRPVGRRACS 201
+S + ER ++ + L G P H+ C++ V+P + AC+
Sbjct: 48 KSGKPDTERKCNEQPCASELNQNGVYEPVHKIQCKHAVQPSTQEACN 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,085,228
Number of Sequences: 59808
Number of extensions: 445024
Number of successful extensions: 2229
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2223
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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