Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021882
         (729 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094724-1|AAM11077.1|  788|Drosophila melanogaster GH21171p pro...    30   3.7  
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA...    30   3.7  
AY069502-1|AAL39647.1| 1066|Drosophila melanogaster LD22513p pro...    29   6.5  
AE013599-1824|AAM70986.1|  934|Drosophila melanogaster CG8233-PC...    29   6.5  
AE013599-1823|AAM70985.2| 1066|Drosophila melanogaster CG8233-PB...    29   6.5  
AE013599-1822|AAF58295.3| 1001|Drosophila melanogaster CG8233-PA...    29   6.5  
AE014297-4816|AAF57203.2|  644|Drosophila melanogaster CG2112-PA...    29   8.6  

>AY094724-1|AAM11077.1|  788|Drosophila melanogaster GH21171p
           protein.
          Length = 788

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = +2

Query: 299 HSDQPLSEGEIIPFSGVCQSGG---ARYPIRPIVSRITIHWPSFYNVVTGKTLALPNLIA 469
           HS   L+ G+  P     QS G   A  P   I S  + H P   +V+T K L       
Sbjct: 566 HSVPTLTHGKTPPQQTPTQSSGPPPAAAPPPTITSETSSHKPPLASVITSKKLTTLEAYP 625

Query: 470 LQHIPLSPAGVIA--RGPHRSPFP 535
           ++  P++    ++    P RSP P
Sbjct: 626 IRKSPIAVVADVSGPAEPTRSPAP 649


>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
            protein.
          Length = 2759

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = +2

Query: 299  HSDQPLSEGEIIPFSGVCQSGG---ARYPIRPIVSRITIHWPSFYNVVTGKTLALPNLIA 469
            HS   L+ G+  P     QS G   A  P   I S  + H P   +V+T K L       
Sbjct: 2537 HSVPTLTHGKTPPQQTPTQSSGPPPAAAPPPTITSETSSHKPPLASVITSKKLTTLEAYP 2596

Query: 470  LQHIPLSPAGVIA--RGPHRSPFP 535
            ++  P++    ++    P RSP P
Sbjct: 2597 IRKSPIAVVADVSGPAEPTRSPAP 2620


>AY069502-1|AAL39647.1| 1066|Drosophila melanogaster LD22513p protein.
          Length = 1066

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = +2

Query: 341  SGVCQSGGARYPIRPIVSRITIHWPSFYNVVTGKTLALPN-LIALQHIPLSPAGVIARGP 517
            SG+  SG      +P    +        N   G TLA  N ++ L    + P G +A G 
Sbjct: 844  SGMVTSGSITAVSKPGNIVLNKGLQQLLNSSPGGTLATQNKVVYLNRSTIKPMGNVAPGT 903

Query: 518  HRSPFPTVAQP 550
            HR P   V+ P
Sbjct: 904  HRVPIRIVSTP 914


>AE013599-1824|AAM70986.1|  934|Drosophila melanogaster CG8233-PC,
           isoform C protein.
          Length = 934

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = +2

Query: 341 SGVCQSGGARYPIRPIVSRITIHWPSFYNVVTGKTLALPN-LIALQHIPLSPAGVIARGP 517
           SG+  SG      +P    +        N   G TLA  N ++ L    + P G +A G 
Sbjct: 712 SGMVTSGSITAVSKPGNIVLNKGLQQLLNSSPGGTLATQNKVVYLNRSTIKPMGNVAPGT 771

Query: 518 HRSPFPTVAQP 550
           HR P   V+ P
Sbjct: 772 HRVPIRIVSTP 782


>AE013599-1823|AAM70985.2| 1066|Drosophila melanogaster CG8233-PB,
            isoform B protein.
          Length = 1066

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = +2

Query: 341  SGVCQSGGARYPIRPIVSRITIHWPSFYNVVTGKTLALPN-LIALQHIPLSPAGVIARGP 517
            SG+  SG      +P    +        N   G TLA  N ++ L    + P G +A G 
Sbjct: 844  SGMVTSGSITAVSKPGNIVLNKGLQQLLNSSPGGTLATQNKVVYLNRSTIKPMGNVAPGT 903

Query: 518  HRSPFPTVAQP 550
            HR P   V+ P
Sbjct: 904  HRVPIRIVSTP 914


>AE013599-1822|AAF58295.3| 1001|Drosophila melanogaster CG8233-PA,
           isoform A protein.
          Length = 1001

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = +2

Query: 341 SGVCQSGGARYPIRPIVSRITIHWPSFYNVVTGKTLALPN-LIALQHIPLSPAGVIARGP 517
           SG+  SG      +P    +        N   G TLA  N ++ L    + P G +A G 
Sbjct: 779 SGMVTSGSITAVSKPGNIVLNKGLQQLLNSSPGGTLATQNKVVYLNRSTIKPMGNVAPGT 838

Query: 518 HRSPFPTVAQP 550
           HR P   V+ P
Sbjct: 839 HRVPIRIVSTP 849


>AE014297-4816|AAF57203.2|  644|Drosophila melanogaster CG2112-PA
           protein.
          Length = 644

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = -1

Query: 297 KNNWKEPRSILMSSEIELPISMGNSCNYC-EQYTRASSGV*MPKVIKPSNPFTNVCWVSV 121
           KN W E   ++++       S+ N   Y  E+   ASSGV   K+IK  +PF    W   
Sbjct: 359 KNQWMETTPVILAGHR----SIVNQVRYNRERCLLASSGV--EKIIKLWSPFAQQGWEGS 412

Query: 120 LTTFSAPP 97
           LT   A P
Sbjct: 413 LTQAEALP 420


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,219,987
Number of Sequences: 53049
Number of extensions: 809360
Number of successful extensions: 1902
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1902
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)