Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021881
(675 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 96 4e-21
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 43 4e-05
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 42 1e-04
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 41 2e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 40 2e-04
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 37 0.003
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 35 0.012
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 33 0.029
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.12
SPCP31B10.04 |||conserved fungal protein|Schizosaccharomyces pom... 31 0.12
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 31 0.12
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 31 0.20
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.20
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 29 0.46
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 29 0.81
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 1.1
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 27 1.9
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 3.3
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 3.3
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 27 3.3
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 26 4.3
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 26 4.3
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 26 5.7
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 26 5.7
SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protei... 25 10.0
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 25 10.0
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 25 10.0
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 10.0
SPBC19F8.06c |meu22||amino acid permease, unknown 11|Schizosacch... 25 10.0
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 96.3 bits (229), Expect = 4e-21
Identities = 43/87 (49%), Positives = 59/87 (67%)
Frame = +3
Query: 255 GLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 434
G TH+A+ PLDL+KCR QV+ Y + GFK + +EG+RGL G PT IGYS+QG
Sbjct: 35 GTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQGCG 94
Query: 435 KFGFYEVFKVAYAGMLDDETAYTYRPS 515
K+GFYE+FK Y+ ++ + A+ YR S
Sbjct: 95 KYGFYELFKHKYSTLVGAQKAHEYRTS 121
Score = 56.4 bits (130), Expect = 4e-09
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = +2
Query: 509 TFVYLAASASAEFIADIALSPMEAAKVRIQTM-PGFASTLRERGRRWSR 652
T +YLAASASAE +ADI L PMEA KVR+QT P FA+T RE WS+
Sbjct: 120 TSIYLAASASAELLADIMLCPMEAIKVRVQTSNPRFANTTRE---AWSK 165
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +1
Query: 178 AVPTESCEFGSPKYFALCGVGGVLS 252
A P ++ + +P+Y+ LC +GG+L+
Sbjct: 9 APPKKTLQLYTPQYYGLCTLGGLLA 33
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 43.2 bits (97), Expect = 4e-05
Identities = 27/74 (36%), Positives = 39/74 (52%)
Frame = +3
Query: 243 CSVMGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 422
C V LT+ P+ +VK R+ Y N GF ++ EG+RG G+AP+ +G S
Sbjct: 110 CIVAALTN----PIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVS- 164
Query: 423 QGLCKFGFYEVFKV 464
QG +F YE K+
Sbjct: 165 QGALQFMAYEKLKL 178
Score = 31.5 bits (68), Expect = 0.12
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 279 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 452
PL +++ RLQV +++++N + R +G+ G KG+ P + Q F YE
Sbjct: 206 PLLVIRTRLQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHLLRVVPQTCITFLVYE 263
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 41.5 bits (93), Expect = 1e-04
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Frame = +3
Query: 258 LTHTAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 422
+T A P+ LVK RLQ+D A +Y++ ++ ++R EG RGL KG + + +G
Sbjct: 175 ITSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGVG- 233
Query: 423 QGLCKFGFYEVFKVAYA 473
+ ++ YE FK A A
Sbjct: 234 ESTLQWVLYEKFKHAVA 250
Score = 26.2 bits (55), Expect = 4.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 321 KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 455
KY ++ FK+ E+G+ GL G + FG YEV
Sbjct: 311 KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSYEV 355
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 40.7 bits (91), Expect = 2e-04
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 249 VMGLTHTAVV-PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 425
+ G T TA+ P D++K R+Q++ YKN ++ K+ EG RG G+ + S+
Sbjct: 219 ISGATATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGFFLRVLRKSIS 278
Query: 426 GLCKFGFYE 452
+ YE
Sbjct: 279 STITWSVYE 287
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 40.3 bits (90), Expect = 2e-04
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Frame = +3
Query: 267 TAVVPLDLVKCRLQV-------DAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 419
T P +++K R Q+ D K YK+V F + R EG+RGL +G ++
Sbjct: 39 TLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQI 98
Query: 420 MQGLCKFGFYE-VFKVAYAGMLDD 488
C+ GFYE + + LDD
Sbjct: 99 CLNGCRLGFYEPIRRTLNTWFLDD 122
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +3
Query: 279 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKG 392
P LVK R+Q + K YK++ N F ++E GV+GL G
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVG 193
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 36.7 bits (81), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Frame = +3
Query: 273 VVPLDLVKCRLQVDAE--------KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 428
V LD + RL DA+ ++ +V+ ++ + R +G+RGL +G+ P+ +G +
Sbjct: 150 VYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYR 209
Query: 429 LCKFGFYEVFK-VAYAGMLD 485
FG Y+ K V G L+
Sbjct: 210 GLYFGMYDTLKPVVLVGPLE 229
Score = 29.5 bits (63), Expect = 0.46
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Frame = +3
Query: 258 LTHTAVVPLDLVKCRLQVDAE---------KYKNVVNGFKVSVREEGVRGLAKGWAPTFI 410
++ TA P++ VK +Q E +YK + FK + EEGV L +G +
Sbjct: 40 VSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVL 99
Query: 411 GYSMQGLCKFGFYEVFK 461
Y F F + FK
Sbjct: 100 RYFPTQALNFAFKDKFK 116
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 34.7 bits (76), Expect = 0.012
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Frame = +3
Query: 255 GLTHTAVV-PLDLVKCRLQVDAEKY-----KN--VVNGFKVSVR----EEGVRGLAKGWA 398
GL + VV PLD+VK R Q Y KN V+ G S+R EG+ GL +G
Sbjct: 16 GLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVG 75
Query: 399 PTFIGYSMQGLCKFGFYEVFKVAY 470
P +GY F YE KV +
Sbjct: 76 PMMLGYLPSWSIYFVVYEKCKVLF 99
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 324 YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFK 461
Y N + F+ + EG+ +G P+ G G+ +F YE FK
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGI-QFPLYEYFK 274
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.5 bits (73), Expect = 0.029
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 279 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 458
PLD +K R Q + + + F+ +V+ EG++GL +G I ++ F Y+
Sbjct: 37 PLDSIKVRQQT--YNFPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSL 94
Query: 459 KVAYA 473
K+ +A
Sbjct: 95 KLTFA 99
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 31.5 bits (68), Expect = 0.12
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 270 AVVPLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 437
A P D+VK ++Q D YKN K + G+RG +G+ P + +
Sbjct: 229 AAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVT 288
Query: 438 FGFYE 452
F YE
Sbjct: 289 FYVYE 293
>SPCP31B10.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 287
Score = 31.5 bits (68), Expect = 0.12
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +3
Query: 498 YTYRPSCTWR----RLRRRNSSPTSPCRPWRRLRSVSKPCLVSRAPSASVAEDGQERSYA 665
Y YR TW+ ++R R S+P R RR R S+P + P+ + ED + Y
Sbjct: 221 YAYRKD-TWKIYMAKIRIRRSAPGYGVRRSRRQRMQSRPVAYTSLPADAHFEDSDDEDYY 279
Query: 666 RS 671
+S
Sbjct: 280 QS 281
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 31.5 bits (68), Expect = 0.12
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +3
Query: 258 LTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 437
+T + PLD++K ++ + E Y+ VV +E G+ G KG S+
Sbjct: 180 ITAAVLTPLDVIKTQINLRPESYRKVVRRI---YKENGIFGFEKGLGLRVFASSLGLSIY 236
Query: 438 FGFYEVFK 461
G YE K
Sbjct: 237 LGTYEHVK 244
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 30.7 bits (66), Expect = 0.20
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 246 SVMGLTHTAVV-PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGY 416
+V G++ + PLD+VK R+Q+ K Y + K V+ EG L +G P +
Sbjct: 16 AVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILME 75
Query: 417 SMQGLCKFGFYEVF 458
+ + KF + +
Sbjct: 76 APKRALKFASNDTY 89
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = +3
Query: 279 PLDLVKCRLQV------DAEKYKNVVNGFKVSVREEGVRGLAKGWAP 401
P D++K R+Q KY REEG L KG+ P
Sbjct: 219 PFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVP 265
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 30.7 bits (66), Expect = 0.20
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +3
Query: 258 LTHTAVVPLDLVKCRLQ----VDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 425
L H+ + P+D +K R+Q V N+VN EGV L +G + +G
Sbjct: 32 LEHSVMYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPS 91
Query: 426 GLCKFGFYEVFK 461
F E FK
Sbjct: 92 HAIYFSVLEFFK 103
Score = 29.9 bits (64), Expect = 0.35
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +3
Query: 243 CSVMGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 422
C++ ++ + P D++K R+Q+ + KYK+ ++ R EG+ + PT I S+
Sbjct: 122 CAIT-ISDAFMTPFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFYISY-PTCIAMSI 179
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 29.5 bits (63), Expect = 0.46
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +3
Query: 246 SVMGLTHTAV-----VPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 395
S+ G+T V PL+++K R Q+ + +V+N R EG++G +G+
Sbjct: 87 SICGMTAEVVSSFVWTPLEVIKARTQISQKG--SVINTISTLARSEGLKGFYRGY 139
Score = 28.3 bits (60), Expect = 1.1
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 15/88 (17%)
Frame = +3
Query: 243 CSVMG--LTHTAVVPLDLVKCRLQV-------------DAEKYKNVVNGFKVSVREEGVR 377
CS +G + T PLD+VK R QV AEK ++ K+ + GV+
Sbjct: 179 CSALGTVVATTISTPLDIVKTRYQVATSSAMRKAEYGLQAEKELGILEIAKLLFSKHGVK 238
Query: 378 GLAKGWAPTFIGYSMQGLCKFGFYEVFK 461
G +G G+ +E FK
Sbjct: 239 GFTRGLFTRMCYIMPSGMISMSVFESFK 266
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.7 bits (61), Expect = 0.81
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 276 VPLDLVKCRLQVDAEKYK 329
+P+DLV RL++DA++YK
Sbjct: 137 LPVDLVPIRLEIDADRYK 154
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -3
Query: 430 RPCIEYPMKVGA---HPLARPRTPSSRTDTLKPFTT 332
RP E P+ G HPL RP PSS + P++T
Sbjct: 154 RPLPETPVSPGGSLVHPLPRPPLPSSVSSHSSPYST 189
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 27.5 bits (58), Expect = 1.9
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +3
Query: 462 VAYAGMLDDETAYTYRPSCTWRRLRRRNSSPTSPCRPWRRLRSVSKPCLVSRAPSASVAE 641
+A M +A + S + ++ SSPTS L SVSK S P SV+
Sbjct: 173 LASTAMSKSASASEFSGSSVTKASKKLTSSPTSVASKKATLSSVSKVASTSSLPVTSVSA 232
Query: 642 DGQERSYA 665
+S A
Sbjct: 233 SVDPKSAA 240
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 360 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 452
+ EG+ GL +G+ P S Q F FYE
Sbjct: 293 KSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 339 NGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 446
+ F++ + V G + W P + G+CK GF
Sbjct: 1105 SNFQIPMHVRSVHGWSCQWGPREDSMLLSGICKHGF 1140
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 158 VAWRRLLRYPRSPVN---LDRLNISLFAELVVFCH 253
+AW+ +YP P+ D ++L+AEL++ H
Sbjct: 302 IAWKYFYQYPAPPIGNDIFDLPTLNLYAELLLLDH 336
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 512 FVYLAASASAEFIADIALSPMEAAKVRIQTMPGF 613
F L A A D++L P++ K R+Q GF
Sbjct: 83 FEALGAGICAGLAVDLSLFPIDTLKTRLQAKGGF 116
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 279 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKG 392
P+D V LQ YK+ + F R G++GL +G
Sbjct: 212 PVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGLYRG 249
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 267 TAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 410
T P D+++ R QV+ YKN+ + + EG+ G +G++ +
Sbjct: 242 TLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNML 294
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 5.7
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 258 LTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFIGYSMQGLC 434
+T V PLD+VK RLQ ++ ++ + + + L KG AP +G + GL
Sbjct: 37 ITTLTVTPLDVVKTRLQSES------ISQYSSTQPISSAKILGKGRPAPKPLGGPVSGLY 90
Query: 435 KFGFYEVFKVAYAGMLDDET 494
+ +E + + G++ T
Sbjct: 91 QIARHEGVRSLWRGLVPSLT 110
>SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protein
Sec23a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Frame = +1
Query: 124 STVAPVAIEQTGGMAASAA-----VPTESCEF 204
S V+PVA++Q SAA +P + CEF
Sbjct: 203 SNVSPVALQQARSFQGSAAPSRFLLPIQQCEF 234
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 25.0 bits (52), Expect = 10.0
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 554 DIALSPMEAAKVRIQTMPGFASTLRERGRRWSRTK 658
D ++SP+ + KV+++ G S+ RE+ ++ K
Sbjct: 117 DSSVSPVSSKKVKVRKTSGKESSKREKSKKKKEKK 151
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 25.0 bits (52), Expect = 10.0
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +3
Query: 39 LKHNNVLFVARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVCCGTHGVL 197
+K NN GA+LS A P Y D W+ V T+G L
Sbjct: 388 VKDNNTSLEVEYGADLSTLDQGSAFPSLAKNPVNPYSKDTWNLNVIASTNGSL 440
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 10.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 436 LQRPCIEYPMKVGAHPLARPRTPSSRTDTL 347
+ RP PM+ H L P+ PS++ L
Sbjct: 1024 IPRPLPNLPMEYNDHTLPSPKEPSNQASNL 1053
>SPBC19F8.06c |meu22||amino acid permease, unknown
11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 10.0
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +1
Query: 43 NIIMFSSLLDAARNSPFRGPLSP-AQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKY 219
N+++ S L ++ + + A ++ AP +T + FGS Y
Sbjct: 347 NVVILLSTLSVGNSASYAASRALFALAKNGYAPKIFNKTNKRGHPIYAIAVTLLFGSIAY 406
Query: 220 FALCGVGGVL-SWV 258
F GVGG L W+
Sbjct: 407 FTEAGVGGALFGWL 420
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,686,503
Number of Sequences: 5004
Number of extensions: 53253
Number of successful extensions: 191
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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