Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021881
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 147 8e-36
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 49 4e-06
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 46 4e-05
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 44 9e-05
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 39 0.003
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.006
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.006
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.052
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.12
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 33 0.16
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.16
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.21
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.21
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.28
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.28
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 33 0.28
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 32 0.37
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 32 0.49
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 30 2.0
SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18) 30 2.0
SB_28356| Best HMM Match : AAA_5 (HMM E-Value=0) 29 2.6
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 29 2.6
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.6
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_59334| Best HMM Match : zf-AN1 (HMM E-Value=0.72) 29 3.4
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 29 3.4
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_38362| Best HMM Match : BRCT (HMM E-Value=0) 29 4.5
SB_9851| Best HMM Match : Hint (HMM E-Value=1.30321e-43) 29 4.5
SB_55277| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 28 7.9
SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11) 28 7.9
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 147 bits (356), Expect = 8e-36
Identities = 64/87 (73%), Positives = 77/87 (88%)
Frame = +3
Query: 255 GLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 434
GLTHTAVVPLDLVKCR+QVD +KY ++VNGFK++++E+GVRGLA+GWAPTFIGYSMQGL
Sbjct: 67 GLTHTAVVPLDLVKCRIQVDPKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQGLG 126
Query: 435 KFGFYEVFKVAYAGMLDDETAYTYRPS 515
KFGFYEVFK+ Y ML +E +Y YR S
Sbjct: 127 KFGFYEVFKIMYGNMLGEEYSYLYRTS 153
Score = 68.1 bits (159), Expect = 6e-12
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +2
Query: 509 TFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLRE 631
T +YLAASASAEF ADIAL+PMEA KVRIQT PG+A TLRE
Sbjct: 152 TSLYLAASASAEFFADIALAPMEAVKVRIQTQPGWAGTLRE 192
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/67 (49%), Positives = 41/67 (61%)
Frame = +1
Query: 52 MFSSLLDAARNSPFRGPLSPAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFALC 231
MFS + A+NS PLS A+C S V + + + ASAA SCEFGS KY+ALC
Sbjct: 1 MFSRYFETAKNSTLGDPLSVAKCPSDVR--SHRNSSRLMASAAGEQHSCEFGSAKYYALC 58
Query: 232 GVGGVLS 252
G GG+LS
Sbjct: 59 GFGGILS 65
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 279 PLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 455
PLD+V+ RL + +KY ++N F R+EG+R +G+ PT IG F YE
Sbjct: 9 PLDMVRARLAITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYET 68
Query: 456 FKVAYAGMLD 485
K A+ D
Sbjct: 69 CKKAFGEFYD 78
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +3
Query: 258 LTHTAVVPLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 425
+ + PLD+V+ R+Q++ KY + +GFKV VR EG GL KG P + +
Sbjct: 694 VAQSGTYPLDVVRRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPT 753
Query: 426 GLCKFGFYEVFKVA-YAGM 479
+F YEV K A YA M
Sbjct: 754 IGIQFAVYEVSKSAMYARM 772
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +3
Query: 246 SVMGLTHTAVVPLDLVKCRLQVDAEKYK--NVVNGFKVSVREEGVRGLAKGWAPTFIGYS 419
++ G++ TA PLD +K LQV A +V+GFK+ +RE G++ L +G I +
Sbjct: 145 ALAGVSRTATAPLDRLKVLLQVQASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIA 204
Query: 420 MQGLCKFGFYEVFK 461
+ KF YE K
Sbjct: 205 PESGIKFFAYEKAK 218
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 261 THTAVVPLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 437
+ T++ PL+++K RL + +Y+ +++ V ++EG+R +G P+ +G
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGID 303
Query: 438 FGFYEVFKVAYAGMLDDETA 497
YE K Y +++A
Sbjct: 304 LAVYETLKNFYLNYHKNQSA 323
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 270 AVVPLDLVKCRLQVDAEKY-----KNVVNGFKVSVREEGVRGLAKGWAPTFI 410
A PL LV+ RLQ A + N+V+ + + E+G +GL +G AP F+
Sbjct: 344 ASYPLSLVRTRLQAQAREKGGGQGDNMVSVLRKIITEDGFKGLYRGLAPNFL 395
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Frame = +3
Query: 267 TAVVPLDLVKCRLQ-----VDAEK-YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 428
TAV P+DLVK R+Q ++AEK YKN ++ F VR EG GL +G P +G S +
Sbjct: 929 TAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEK 988
Query: 429 LCK 437
K
Sbjct: 989 AIK 991
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 267 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 407
T P D++K R+ + Y+ V F ++V EG+ L KGW PT+
Sbjct: 316 TISTPADVIKTRIMNNPSGYQGAVECFMLAVHREGLLSLYKGWLPTW 362
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Frame = +3
Query: 279 PLDLVKCRLQVDAEKY--------KNVVNGFKVSVREEGVRGLAKGWAP 401
P DLVK ++Q++ + + + F+ V + G RGL KGW P
Sbjct: 151 PTDLVKVQMQMEGRRLSFYPISSVRGTFHAFRNIVDKYGFRGLWKGWLP 199
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 279 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 452
P +L+K RLQV + Y ++ F +R EGVRGL KG+ + G G C YE
Sbjct: 35 PANLIKIRLQVQRKTTLYNGSLDAFTKVIRTEGVRGLYKGYLVSCAGL-FAGQCYITTYE 93
Query: 453 VFK 461
+ +
Sbjct: 94 LVR 96
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +3
Query: 261 THTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGV-RGLAKGWAPTFIGYSM 422
+ T PLD+V+ R+Q+ D KY +N F E+G+ RGL +G + ++
Sbjct: 120 SQTLAYPLDVVRRRMQLAGTVADGHKYSTCINTFISVYTEDGIRRGLYRGLSINYLRVCP 179
Query: 423 QGLCKFGFYEVFK 461
Q F YEV K
Sbjct: 180 QVAVMFAVYEVVK 192
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +3
Query: 258 LTHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGVR-GLAKGWAPTFIGYS 419
++ T PLD+V+ R+Q+ D KY +N +++G+R GL +G + ++
Sbjct: 185 VSQTIAYPLDVVRRRMQLAGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGLSINYLRVC 244
Query: 420 MQGLCKFGFYEVFK 461
Q FG YEV K
Sbjct: 245 PQVAIMFGVYEVTK 258
Score = 37.5 bits (83), Expect = 0.010
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Frame = +3
Query: 246 SVMGLTHTAVV-PLDLVKCRL--QVDAEK-YKNVVNGFK-VSVREEGVRGLAKGWAPTFI 410
S+ G+T A PLD+V+ RL QV ++ Y + + +SV+E G + L KG+ PT +
Sbjct: 72 SLAGMTACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCISVKEGGPKALYKGFVPTLL 131
Query: 411 GYSMQGLCKFGFYEVFKVAYAGMLDDETAYT 503
++ GFY +F+ A L+ A+T
Sbjct: 132 --TIVPAMGIGFY-MFETMKAYFLETRIAFT 159
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +3
Query: 258 LTHTAVVPLDLVKCRLQVDAEK----YKNVVNGFKVSVREEGVRGLAKGWAPTFI 410
++ TA PLD+V+ R+Q+ + YK+ ++ F V+ EG RGL KG P +
Sbjct: 174 VSQTATYPLDVVRRRMQMKGIRADFAYKSTLHAFSSIVKLEGFRGLYKGMWPNIL 228
Score = 34.7 bits (76), Expect = 0.069
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +3
Query: 258 LTHTAVVPLDLVKCRLQVDAE--KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 431
++ T+V PL+ VK LQ+ + K+K V+ +EEG+ G KG I
Sbjct: 47 VSRTSVSPLERVKILLQIQVKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSA 106
Query: 432 CKFGFYEVFKVAYA 473
+F YE +K A
Sbjct: 107 VQFAAYEEYKKGIA 120
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 35.1 bits (77), Expect = 0.052
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +3
Query: 273 VVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFIG 413
V P +++K RL V YK + + K +REEG+ L KG P+F+G
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLG 221
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 35.1 bits (77), Expect = 0.052
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 300 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 455
R + DA +K GF ++ +EEG L K T YS++GL KF FYEV
Sbjct: 909 RTKPDATDKVYGEFQGFNITYKEEGGGTLYKTADHTKRSYSIKGLKKFTFYEV 961
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Frame = +3
Query: 279 PLDLVKCRLQVDAEK--------------YKNVVN-GFKVSVREEGVRGLAKGWAPTFIG 413
P+++VK R+Q+D E YK ++ G REEGVRGL +G P +
Sbjct: 26 PIEVVKIRMQLDNELGSKHNSKDIFRERYYKGLIRTGLSRVYREEGVRGLYRGIFPALLR 85
Query: 414 YSMQGLCKFGFYEVFK 461
++ + G YE K
Sbjct: 86 QAIYSSTRLGAYEPIK 101
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +3
Query: 255 GLTHTAVV-PLDLVKCRLQV----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPT 404
G+ +A+ P DLVK R Q + YKN+ + F ++EG GL G PT
Sbjct: 125 GVIGSAIATPTDLVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPT 179
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Frame = +3
Query: 249 VMGLTHTAVV-PLDLVKCRLQVDAEK-------YKNVVNGFKVSVREEGVRGLAKGWAPT 404
V G T V P+D+V+ R + Y+ ++ +VR EG+ L KG+ P
Sbjct: 220 VAGFVATCVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGFFPN 279
Query: 405 FIGYSMQGLCKFGFYEVFKVAYAGM 479
+ + + F YE + YAG+
Sbjct: 280 WTRTGLDTIIIFFVYERLR-RYAGL 303
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Frame = +3
Query: 228 LRSWWCSVM-GLTHTAVV-PLDLVKCRLQVDA-----------EKYKNVVNGFKVSVREE 368
+ S C + G+ AV+ P D++K R+QV ++Y V + F+ ++EE
Sbjct: 30 IESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEE 89
Query: 369 GVRGLAKGWAPT 404
G GL KG AP+
Sbjct: 90 GAMGLFKGLAPS 101
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +3
Query: 249 VMGLTHT-AVVPLDLVKCRLQ----VDAE-KYKNVVNGFKVSVREEGVRGLAKGWAPTFI 410
+ GL T A +P+D+ K R+Q +D + +YK ++ VR EGV L KG+ P +
Sbjct: 102 ISGLATTVASMPVDIAKTRIQNMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYF 161
Query: 411 GYSMQGLCKFGFYE 452
+ F F E
Sbjct: 162 RIGPHTVLTFIFLE 175
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Frame = +3
Query: 255 GLTHTAVV-PLDLVKCRLQVDAEKYKNVVN--GFKVSVR----EEGVRGLAKGWAPTFIG 413
G+ TA PLD+V+ RL V +++ N G ++R EEG+RGL KG P+ +
Sbjct: 39 GVVATASTHPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSLVS 98
Query: 414 YSMQGLCKFGFYEVFKV 464
+ + Y++ K+
Sbjct: 99 IAPFLGVQQSVYDIMKL 115
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Frame = +3
Query: 246 SVMGLTHTAV-VPLDLVKCRLQV-------DAEKYKNVVNGFKVSVREEGVRGLAKG 392
SV G+ A PLDL+K RLQ + +K ++ F +VR EG+RGL KG
Sbjct: 28 SVSGMLGCAAGQPLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 279 PLDLVKCRLQVDAEKYKNVVNGFKVSVR----EEGVRGLAKGWAPTFI 410
P + +KC LQV+A + +G V+ EEGVRG+ +G PT I
Sbjct: 140 PAERIKCILQVEAGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMI 187
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 261 THTAVVPLDLVKCRLQVD----AEKYKNVVNGFKVSVREEGVRGLAKGWAPT 404
T + PLD VKC LQ++ Y V+ + RE GVRG+ KG + T
Sbjct: 151 TSFVLTPLDRVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 243 CSVMGLTHTAVV--PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGY 416
C +M +VV P D+VK RLQ++ Y + + G+ GL +G P +
Sbjct: 529 CGIMAGAMASVVTQPADVVKTRLQMNPYMYPSNRAAVVAIIEAGGIEGLFRGLVPRTVRR 588
Query: 417 SMQGLCKFGFYE 452
++ + YE
Sbjct: 589 TLMSAMAWTIYE 600
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 258 LTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKV---SVREEGVRGLAKGWAPTFIGYSMQG 428
+ HT PL +K RLQ++ + + FK+ + + EG+R +G +++G S +
Sbjct: 847 INHTVTNPLWFIKTRLQLENQGGTR-ASAFKIVSMAYKAEGIRAFYRGLTASYVGIS-ET 904
Query: 429 LCKFGFYEVFK 461
+ F YE K
Sbjct: 905 VVHFTIYERLK 915
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +3
Query: 273 VVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFI 410
V P +++K RL V YK + + K +REEG+ L KG P+F+
Sbjct: 439 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFL 489
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2
Query: 254 HDRTPPTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSG 99
H P P RA L P + S G+ A+ A PP +ATG + + SG
Sbjct: 811 HSLLHPPPGRASQL--PLQEQSSGSRAEEASPPPALVATGPSASYRLPNASG 860
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 31.9 bits (69), Expect = 0.49
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 246 SVMGLTH-TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFI 410
SV G+T TA PLD +K RLQ A ++ +V+ EGVRGL KG AP +
Sbjct: 77 SVGGVTGVTAGQPLDTIKVRLQ--ASFGAGPLDMLARTVKTEGVRGLYKGMLAPVLV 131
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 270 AVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 395
A+ P++++K RLQ+ Y+ V++ +EEG+R + +
Sbjct: 14 AMNPIEVIKQRLQMYGSPYRGVIHCATSVFKEEGIRAFYRSY 55
>SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18)
Length = 817
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 545 IPPTQTPPGTRRSVSVGGLV 486
+PP + PPGT+ ++S GG V
Sbjct: 679 VPPAEYPPGTKMNISDGGFV 698
>SB_28356| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 1737
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -2
Query: 296 LHQVEGHHGRVGQTHDRTPPTPQRAKYLGDPNSQDSVGTAADAAMP 159
LH++ HH +G+ R + +LG+ + Q + AD MP
Sbjct: 268 LHRLYPHHLMLGEEGQRVVEDTLKTFHLGEKSEQPQSSSVADVTMP 313
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = +3
Query: 279 PLDLVKCRLQVDAEK---------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 431
PL++VK R+Q+ E Y+NV + + EG+ + KG P I +
Sbjct: 24 PLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGILAMQKGLFPALIYQVIMNG 83
Query: 432 CKFGFYEV 455
+ G Y++
Sbjct: 84 TRLGSYQI 91
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 279 PLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 431
P D++K R+Q D +YK +++ S +EEG+ +G PT + +Q L
Sbjct: 152 PFDVIKSRIQADGNLGKFRYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGFLQVL 206
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 8/95 (8%)
Frame = +3
Query: 246 SVMGLTHTAVV-PLDLVKCRLQVDAEK-------YKNVVNGFKVSVREEGVRGLAKGWAP 401
SV GL ++ P+DLVK +LQ+ E Y+ V+ R G+ G +G
Sbjct: 41 SVAGLAQVPLIAPVDLVKIKLQMQTEAKRSTRSVYRGPVDCLVKLYRSRGLAGCFQGNTV 100
Query: 402 TFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTY 506
T + FG YE+ ++ + TY
Sbjct: 101 TAVRDIPGFAVYFGVYELLCDWFSNLFGSRGVATY 135
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 206 PNSQDSVGTAADAAMPPVCSIATGATVDWHWAGD-SGPRNGEFRAASSNEENIIM 45
P Q T A PPV +G+ D W GD S P+ + R+ N +M
Sbjct: 398 PQPQKPPATRPSATPPPVTGDESGSDYDEDWGGDWSEPKPTQSRSIVGEMRNDLM 452
>SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 120 PVDGRARGYRADRWHGGVCCG 182
P +G+ RG+R GGVCCG
Sbjct: 91 PREGQIRGFRFVHISGGVCCG 111
>SB_59334| Best HMM Match : zf-AN1 (HMM E-Value=0.72)
Length = 1161
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/75 (21%), Positives = 27/75 (36%)
Frame = -2
Query: 269 RVGQTHDRTPPTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSGPRN 90
R G+ + P R + P S+ A C + A+ + AG GP
Sbjct: 747 RYGEWRHKKPGYEWRPEAAWGPKKSGSLAREPSTAPSLFCDLVAAASAKMYLAGQGGPGK 806
Query: 89 GEFRAASSNEENIIM 45
E+ + NI++
Sbjct: 807 TEWAVSMFRGRNIVV 821
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Frame = +3
Query: 279 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 434
P+DL K ++QV + Y+NV + + G+RG +G + T +
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 435 KFGFYEVFK 461
FGFYE K
Sbjct: 281 FFGFYEFTK 289
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 279 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 449
P D +K ++Q KN ++ + ++EG +GL G P+ + F FY
Sbjct: 29 PFDTIKVKMQTFPSMSKNALDCGIKTFKQEGFKGLYAGTIPSLAANIAENSFLFLFY 85
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 118 CQSTVAPVAIEQTGGMAASAAVPTES 195
C ST PV +QT A+SA VPT S
Sbjct: 154 CLSTARPVTTQQTKKPASSAFVPTTS 179
>SB_38362| Best HMM Match : BRCT (HMM E-Value=0)
Length = 1572
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 507 RPSCTWRRLRRRNSSPTSPCRPWRRLRSVSKPCLVSRAPSASVAEDGQERS 659
R S + RR+ RN R RRL S S + + S++ ED RS
Sbjct: 1116 RSSLSLRRISSRNHMAARGRRKSRRLNSCSSTGIPTNTSSSAAPEDSDSRS 1166
>SB_9851| Best HMM Match : Hint (HMM E-Value=1.30321e-43)
Length = 493
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -2
Query: 251 DRTPPTPQRAKYLGDPNSQDSV--GTAADAAMPPVCSIATGATVDWHWAGDSGPRNGEFR 78
D TP +A DP + S+ + A +C V + W G+S R+ FR
Sbjct: 424 DGTPNVLDKASMFIDPRDEVSIRDNSGRVALQVVICVAKLHVVVHFAWTGESNSRDFHFR 483
Query: 77 A 75
A
Sbjct: 484 A 484
>SB_55277| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -2
Query: 575 PWATGRCRR*IPPTQTPPGTRRSVSVGGLVVQHTGVGDFEHFIETELAETLH*IPNESGS 396
PWA+ + + +PP+ P TR+S S ++ G+ I ELA+ + +P G
Sbjct: 213 PWASKKVLQLLPPS-CEPSTRKSSSAVQVIGYLQGMLGTLFMISPELAQQVLKLPPSEGM 271
Query: 395 PSF 387
F
Sbjct: 272 SRF 274
>SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 381 LAKGWAPTFIGYSMQGLCKFGFYEVFKV 464
L KGW T ++M G K+G E+ K+
Sbjct: 123 LLKGWGATSFEHAMIGAAKYGHIEIVKL 150
>SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +3
Query: 63 VARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVCCGTHGVL 197
+ RCG + W +P P++GR R W G C +L
Sbjct: 338 IRRCGTH-APGWMVGRQPSPIEGRVRRTVCFNWAGNCCKWRQNIL 381
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +3
Query: 255 GLTHT-AVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 410
G+T + AV PLD++K RLQ+ Y +++ K EG+ KG P I
Sbjct: 216 GMTASVAVNPLDVIKTRLQLLNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMI 273
>SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11)
Length = 155
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 300 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 455
R + DA +K GF ++ +EEG L K T + GL KF +YEV
Sbjct: 78 RTKPDATDKIYGEFQGFNITYKEEGGGTLYKTTNHTTRSCIITGLKKFTYYEV 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,943,311
Number of Sequences: 59808
Number of extensions: 486982
Number of successful extensions: 1652
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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