Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021880
(653 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 160 9e-42
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 160 9e-42
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 21 7.9
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 21 7.9
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 7.9
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 21 7.9
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 160 bits (389), Expect = 9e-42
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +1
Query: 256 ERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 435
ERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQALNF
Sbjct: 32 ERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNF 91
Query: 436 AFKDKYKQVFLGGVDKKTQFWRYF 507
AFKDKYKQVFLGGVDK TQF RYF
Sbjct: 92 AFKDKYKQVFLGGVDKNTQFLRYF 115
Score = 73.3 bits (172), Expect = 2e-15
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +3
Query: 543 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCIS 653
TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++
Sbjct: 128 TSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLT 164
Score = 56.0 bits (129), Expect = 3e-10
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 MSNLADPVAFAKDFLAGGISAAVSKTAVAP 253
MS LADPVAFAKDFLAGG++AA+SKT VAP
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAP 30
Score = 25.8 bits (54), Expect = 0.37
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 319 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 408
YK + + I K +G +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.4 bits (43), Expect = 7.9
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 310 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 447
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 160 bits (389), Expect = 9e-42
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +1
Query: 256 ERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 435
ERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQALNF
Sbjct: 32 ERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNF 91
Query: 436 AFKDKYKQVFLGGVDKKTQFWRYF 507
AFKDKYKQVFLGGVDK TQF RYF
Sbjct: 92 AFKDKYKQVFLGGVDKNTQFLRYF 115
Score = 73.3 bits (172), Expect = 2e-15
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +3
Query: 543 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCIS 653
TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++
Sbjct: 128 TSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLT 164
Score = 56.0 bits (129), Expect = 3e-10
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 MSNLADPVAFAKDFLAGGISAAVSKTAVAP 253
MS LADPVAFAKDFLAGG++AA+SKT VAP
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAP 30
Score = 25.8 bits (54), Expect = 0.37
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 319 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 408
YK + + I K +G +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.4 bits (43), Expect = 7.9
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 310 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 447
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.4 bits (43), Expect = 7.9
Identities = 15/56 (26%), Positives = 20/56 (35%)
Frame = -3
Query: 636 DRRIHAGHLPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYHEVTPELRLLVNTA 469
+R I+ G L H + G + T+ R H PD L NTA
Sbjct: 27 ERIIYPGTLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTA 82
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 7.9
Identities = 15/56 (26%), Positives = 20/56 (35%)
Frame = -3
Query: 636 DRRIHAGHLPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYHEVTPELRLLVNTA 469
+R I+ G L H + G + T+ R H PD L NTA
Sbjct: 32 ERIIYPGTLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTA 87
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 555 STERWLRRHHRRPDYHEVTPELRLL 481
ST L HHR D HE++ ++++
Sbjct: 311 STILILNYHHRNADTHEMSEWVKVV 335
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 7.9
Identities = 15/56 (26%), Positives = 20/56 (35%)
Frame = -3
Query: 636 DRRIHAGHLPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYHEVTPELRLLVNTA 469
+R I+ G L H + G + T+ R H PD L NTA
Sbjct: 32 ERIIYPGTLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTA 87
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,471
Number of Sequences: 438
Number of extensions: 3225
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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