Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021879
         (604 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    26   0.21 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   0.65 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.5  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.0  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   8.0  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -2

Query: 513 CPHHQLGVVDAVNGEYESAQGRVHERYDLTFHEYRHDTEYK 391
           C H   G    +N E   AQ  ++E +D+T   YRH TE K
Sbjct: 50  CTHLIYGYA-GINAETFKAQP-LNELFDVTRDNYRHITELK 88


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +1

Query: 394 VFGIVAIFVKGKVITLVYASLGALIFS 474
           +FG   IF+ G+++  + +SLG L+++
Sbjct: 173 IFGWSLIFLFGRIVLQLLSSLGFLLYA 199


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = +1

Query: 463 LIFSIYRVYDTQ-LMMGASTSTASRPEE--YICAALNLYLDIINI 588
           LI  + + +D   L++ A+ + AS   +  Y   AL+ YLDIIN+
Sbjct: 160 LIKEMRKEFDKNGLILTAAVAAASGSVDISYDVPALSKYLDIINV 204


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 113 VKIPLTISRCSNFYTMNFTIDSLDKHNL 30
           VKIPL I   SN     +    LDK N+
Sbjct: 447 VKIPLVIIWSSNLSKRPYIYKYLDKKNV 474


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 576 HHQHIPGHS 602
           HH H+P HS
Sbjct: 52  HHSHMPPHS 60


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 576 HHQHIPGHS 602
           HH H+P HS
Sbjct: 52  HHSHMPPHS 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,660
Number of Sequences: 336
Number of extensions: 3102
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)