Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021879
(604 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024777-1|AAF60563.1| 133|Caenorhabditis elegans Hypothetical ... 86 2e-17
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 78 6e-15
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 78 6e-15
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 76 2e-14
U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily ass... 68 6e-12
U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical pr... 30 1.1
U58760-9|AAK31465.1| 654|Caenorhabditis elegans Dishevelled rel... 30 1.1
AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein. 30 1.1
AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein. 30 1.1
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 30 1.5
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81524-1|CAB04249.1| 356|Caenorhabditis elegans Hypothetical pr... 27 7.8
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 27 7.8
>AC024777-1|AAF60563.1| 133|Caenorhabditis elegans Hypothetical
protein Y42H9AR.2 protein.
Length = 133
Score = 86.2 bits (204), Expect = 2e-17
Identities = 51/120 (42%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Frame = +1
Query: 256 YEADAVLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVA----IFVK 423
Y ADAVL+++ IT + LFA TK D T GV I L++FG++A IF+
Sbjct: 9 YSADAVLISLLITTGCSASIILFAATTKKDLTSCLGVAFILGICLMLFGLMACIFCIFLN 68
Query: 424 GKVITLVYASLGALIFSIYRVYDTQLMMGASTSTASRPEEYICAALNLYLDIINIFLGIL 603
+ + +VYA LGAL+ Y D QL+MG S PEEYI AA ++++DI+ +FL IL
Sbjct: 69 WQFLYIVYAVLGALLCMFYLAIDIQLIMGGRRVEIS-PEEYIFAATHVFVDILGMFLNIL 127
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 77.8 bits (183), Expect = 6e-15
Identities = 42/120 (35%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Frame = +1
Query: 256 YEADAVLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAI----FVK 423
++A+ VL+A+ I + + A QTK+D T G +L ++ + FG+V + F K
Sbjct: 171 HDANVVLLALAICIGCTFSIVIVASQTKFDLTAHMGYILIISMCFMFFGLVVVICSMFFK 230
Query: 424 GKVITLVYASLGALIFSIYRVYDTQLMMGASTSTASRPEEYICAALNLYLDIINIFLGIL 603
K + +VYA GALI +Y D Q++MG S PEEYI A++ +++DI+ +F +L
Sbjct: 231 IKFLMMVYALGGALIMMLYLFLDVQMLMGGKKYEIS-PEEYIFASVQIFIDIVQMFWFLL 289
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 122 FIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFL 235
+++ V +++ CC VRRK P N I IFT A S +
Sbjct: 126 YVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVM 163
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 77.8 bits (183), Expect = 6e-15
Identities = 42/120 (35%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Frame = +1
Query: 256 YEADAVLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAI----FVK 423
++A+ VL+A+ I + + A QTK+D T G +L ++ + FG+V + F K
Sbjct: 171 HDANVVLLALAICIGCTFSIVIVASQTKFDLTAHMGYILIISMCFMFFGLVVVICSMFFK 230
Query: 424 GKVITLVYASLGALIFSIYRVYDTQLMMGASTSTASRPEEYICAALNLYLDIINIFLGIL 603
K + +VYA GALI +Y D Q++MG S PEEYI A++ +++DI+ +F +L
Sbjct: 231 IKFLMMVYALGGALIMMLYLFLDVQMLMGGKKYEIS-PEEYIFASVQIFIDIVQMFWFLL 289
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 122 FIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFL 235
+++ V +++ CC VRRK P N I IFT A S +
Sbjct: 126 YVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVM 163
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 75.8 bits (178), Expect = 2e-14
Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Frame = +1
Query: 256 YEADAVLMAVGITAAVCLG-LTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAIFV---- 420
Y +VL+ + IT VC G + +F+++TK D T G+ ++VL FGI A+
Sbjct: 119 YNVQSVLICLCITT-VCSGSVIIFSMKTKSDLTSKMGIAFMLSMVLFSFGIFALIFTLAF 177
Query: 421 KGKVITLVYASLGALIFSIYRVYDTQLMMGASTSTASRPEEYICAALNLYLDIINIFLGI 600
+ + VY+ L AL+ Y D QL+MG S PE+YI AA+ ++LDI+NIFL +
Sbjct: 178 NWQFLYSVYSGLAALLMMFYLAIDVQLLMGGRKYELS-PEDYIFAAMEIFLDILNIFLML 236
Query: 601 L 603
L
Sbjct: 237 L 237
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 125 IVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFL 235
IV +V IA++CC ++RR+ P N I L IFT + + +
Sbjct: 75 IVFLVVAIALSCCGNLRRQFPVNIILLTIFTLSAAVM 111
>U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily
assigned gene nameprotein 132 protein.
Length = 276
Score = 67.7 bits (158), Expect = 6e-12
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Frame = +1
Query: 253 VYEADAVLMAVGITAAVCLGLTLFALQTKWDFTM---MGGVLLCATIVLLVFGIVAIFVK 423
++EA VL A IT V L + LQ K DF++ G LLC VLL GI +F
Sbjct: 157 LFEAKVVLEAAVITGLVVASLFAYTLQNKRDFSVGYASMGSLLC---VLLWAGIFQMFFM 213
Query: 424 GKVITLVYASLGALIFSIYRVYDTQLMMGASTSTASRPEEYICAALNLYLDIINIFLGIL 603
+ V GA +F + V D ++M + PE+YICA ++LY+DI+N+F+ IL
Sbjct: 214 SPAVNFVINVFGAGLFCVLLVIDLDMIMYRFS-----PEDYICACVSLYMDILNLFIRIL 268
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 176 RKAPTNFIFLAIFTAAQSFLLG 241
R+ P N++ LA FTA Q+ +G
Sbjct: 131 REVPLNYVLLAAFTAVQAVTMG 152
>U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical
protein K11H12.8a protein.
Length = 342
Score = 38.3 bits (85), Expect = 0.004
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Frame = +1
Query: 154 GVLSRR-ETQSSDELHIPGHLHGSAELPARH*RKVYEADAVLM-AVGITAAVCLGLTLFA 327
G+L+R + +S+ H+ LH L A + A VL A TA + GL+ A
Sbjct: 163 GMLARSIDYESTVAKHLAWALHCGV-LGAVFAPLCFMAGPVLTRAAWYTAGIVGGLSATA 221
Query: 328 LQTKWD-FTMMGGVLLCATIVLLVFGIVAIFVK-GKVITLVYASL----GALIFSIYRVY 489
+ + F MM G L V+ V I A F+ G + AS+ G ++FS + +Y
Sbjct: 222 ITAPSEKFLMMSGPLAMGFGVVFVANIGAFFLPPGSALGASLASIVVYGGLILFSAFLLY 281
Query: 490 DTQLMMGASTSTASRPEEY-----------ICAALNLYLDIINIFLGIL 603
DTQ ++ + + + Y I A +++Y+D++NIF+ ++
Sbjct: 282 DTQRLVKKAENHPHSSQLYGSDMQIRSFDPINAQMSIYMDVLNIFMRLV 330
>Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical protein
K12F2.2a protein.
Length = 1066
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Frame = +3
Query: 333 DQVGLHHDGRRAALRHHRPPCIRYRGDIRER*GHNARVRVPGRSHILHLPRLRHPADDGG 512
D+ G+ + R PC RG R R+ P S + P + H GG
Sbjct: 766 DKKGIANSIARQLQHFSLSPC---RGGRTHRSVSTHRIDPPNAS-LPSTPTMSHKKVIGG 821
Query: 513 K-HKYSIS-ARGVHLRGPQPLLGHHQHIPGHS 602
K S S A G P P LG+HQ +P HS
Sbjct: 822 SLAKLSASGASGSTGAPPSPALGYHQSLPRHS 853
>Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical protein
K12F2.2a protein.
Length = 1066
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Frame = +3
Query: 333 DQVGLHHDGRRAALRHHRPPCIRYRGDIRER*GHNARVRVPGRSHILHLPRLRHPADDGG 512
D+ G+ + R PC RG R R+ P S + P + H GG
Sbjct: 766 DKKGIANSIARQLQHFSLSPC---RGGRTHRSVSTHRIDPPNAS-LPSTPTMSHKKVIGG 821
Query: 513 K-HKYSIS-ARGVHLRGPQPLLGHHQHIPGHS 602
K S S A G P P LG+HQ +P HS
Sbjct: 822 SLAKLSASGASGSTGAPPSPALGYHQSLPRHS 853
>Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical
protein K12F2.2b protein.
Length = 582
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Frame = +3
Query: 333 DQVGLHHDGRRAALRHHRPPCIRYRGDIRER*GHNARVRVPGRSHILHLPRLRHPADDGG 512
D+ G+ + R PC RG R R+ P S + P + H GG
Sbjct: 282 DKKGIANSIARQLQHFSLSPC---RGGRTHRSVSTHRIDPPNAS-LPSTPTMSHKKVIGG 337
Query: 513 K-HKYSIS-ARGVHLRGPQPLLGHHQHIPGHS 602
K S S A G P P LG+HQ +P HS
Sbjct: 338 SLAKLSASGASGSTGAPPSPALGYHQSLPRHS 369
>U58760-9|AAK31465.1| 654|Caenorhabditis elegans Dishevelled
related protein 2 protein.
Length = 654
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Frame = -2
Query: 477 NGEYE----SAQGRVHERYDLTFHEYRHDTEYKEDDGGAEQ-HAAHHGEVPLGLQSEQSQ 313
NG +E + +G VH H + D K G E AAHH + P ++SQ
Sbjct: 173 NGRFELYLLTVEGSVHSDTSSGRHRRKQDGSSKGSSGSREYLRAAHHYDNPTPFSDDESQ 232
Query: 312 AQA 304
A +
Sbjct: 233 ASS 235
>AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein.
Length = 582
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Frame = +3
Query: 333 DQVGLHHDGRRAALRHHRPPCIRYRGDIRER*GHNARVRVPGRSHILHLPRLRHPADDGG 512
D+ G+ + R PC RG R R+ P S + P + H GG
Sbjct: 282 DKKGIANSIARQLQHFSLSPC---RGGRTHRSVSTHRIDPPNAS-LPSTPTMSHKKVIGG 337
Query: 513 K-HKYSIS-ARGVHLRGPQPLLGHHQHIPGHS 602
K S S A G P P LG+HQ +P HS
Sbjct: 338 SLAKLSASGASGSTGAPPSPALGYHQSLPRHS 369
>AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.
Length = 1066
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Frame = +3
Query: 333 DQVGLHHDGRRAALRHHRPPCIRYRGDIRER*GHNARVRVPGRSHILHLPRLRHPADDGG 512
D+ G+ + R PC RG R R+ P S + P + H GG
Sbjct: 766 DKKGIANSIARQLQHFSLSPC---RGGRTHRSVSTHRIDPPNAS-LPSTPTMSHKKVIGG 821
Query: 513 K-HKYSIS-ARGVHLRGPQPLLGHHQHIPGHS 602
K S S A G P P LG+HQ +P HS
Sbjct: 822 SLAKLSASGASGSTGAPPSPALGYHQSLPRHS 853
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -2
Query: 465 ESAQGRVHERYDLTFHEYRHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHGRRYA 286
ES + H HE++ ++ +G +HAAHH E + + + HG ++
Sbjct: 359 ESEDEKKHAPAHHEHHEHKDGAHHEHKEGEHHEHAAHHDEHGV---HHRHHGEHHGTHHS 415
Query: 285 NCH 277
H
Sbjct: 416 PAH 418
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = -2
Query: 507 HHQLGVVDAVNGEYESAQGRVHERYDLTFHEYRHDTEYKEDDGGAEQHAAHHG 349
H GV +G + S H T H H + G +H AHHG
Sbjct: 648 HGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHG 700
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Frame = +3
Query: 195 SYSWPS-SRQRRASCSALAQGLRSGCGADGSWHNGGRVPGPDSVRSADQVGLHHDGRRAA 371
+Y W S SC A G G G GS H+GG G G H+ G
Sbjct: 155 NYQWNQCSPMYMLSCEAHGGGHHGGGGGGGSHHHGGGGGGGGHHHHGG--GGHYHGGGGG 212
Query: 372 LRHH 383
HH
Sbjct: 213 FHHH 216
>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical protein
C45G3.1 protein.
Length = 1186
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -1
Query: 286 QLPSAPHPLRRPCANAEQEALRCREDGQEYEVRRSFASHVGTARHRDETD-YQHYEGILL 110
+L + R N E+ AL R+ G++ RS A H H D++ +++ +
Sbjct: 885 ELKRKQQEIARKLGNIERNALAVRDGGEDSSDSRSDAGHDVAILHGDDSQLFENSMQLDQ 944
Query: 109 KFHLQSPDVQ 80
K LQ+ + Q
Sbjct: 945 KSQLQNDETQ 954
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 470 NMRAPRDAYTSVMTLPFTNIATIPNTRRTMVAQSSTPP 357
N + R TS T P T + IP+ T +SST P
Sbjct: 400 NASSARPNVTSTTTAPTTESSAIPDVTSTTTTKSSTTP 437
>Z81524-1|CAB04249.1| 356|Caenorhabditis elegans Hypothetical
protein F32H5.1 protein.
Length = 356
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 195 SYSWPSSRQRRASCSA-LAQGLRSGCGADGSW 287
+++WP S Q SC L G G DGSW
Sbjct: 140 TFNWPLSAQDPLSCCVGLMSICGDGWGCDGSW 171
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 27.5 bits (58), Expect = 7.8
Identities = 30/119 (25%), Positives = 43/119 (36%), Gaps = 3/119 (2%)
Frame = +3
Query: 186 RRTSYSWPSSRQRRASCSALAQGLRSGCGADGSWH---NGGRVPGPDSVRSADQVGLHHD 356
RR S S +S +R + ++ L S H +G R P R ++
Sbjct: 284 RRKSTSHSTSLSKRRYLRSRSRSLSKSPARRRSRHLSRSGSRTPAQRHSRRSESTSRRRS 343
Query: 357 GRRAALRHHRPPCIRYRGDIRER*GHNARVRVPGRSHILHLPRLRHPADDGGKHKYSIS 533
GR + R PP R R R R +R R P R+ R R A + +S
Sbjct: 344 GRHSRSRSRSPP--RKRPVRRSR--SRSRSRTPNRNWTRARSRTRSQAKSSSTLTWPLS 398
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,054,989
Number of Sequences: 27780
Number of extensions: 311945
Number of successful extensions: 1100
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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