Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021879
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    24   1.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   1.3  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   3.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.3  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = +3

Query: 300 RVPGPDSVRSADQVGLHHDGRRAALRHHRPPCIRYRGDIRER*GHNARVRVPGRSHILHL 479
           R P P   R A+      + R   +   RPP  R R +     G+N  V +P +    H 
Sbjct: 82  RPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIP-QPRPPH- 139

Query: 480 PRL-RHPADDGGKHK 521
           PRL R P  + G ++
Sbjct: 140 PRLRREPEAEPGNNR 154



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
 Frame = -1

Query: 310 PGT-RPPLCQLPSAPHPLRRPCANAEQE 230
           PG  RP     P  PHP  R  A +E E
Sbjct: 70  PGNNRPIYIPQPRPPHPRLRREAESEAE 97


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -2

Query: 372 EQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQHR 268
           EQH  +  +      S+QSQ   H R+     QH+
Sbjct: 199 EQHMMYQQQQQSQAASQQSQPGMHPRQQQQAQQHQ 233


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = -1

Query: 319 ESGPGT-RPPLCQLPSAPHPLRRPCANAEQE 230
           E+ PG  RP     P  PHP  R  A  E E
Sbjct: 94  EAEPGNNRPVYISQPRPPHPRLRREAEPEAE 124



 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = -1

Query: 319 ESGPGT-RPPLCQLPSAPHPLRRPCANAEQE 230
           E+ PG  RP     P  PHP  R  A  E E
Sbjct: 150 EAEPGNNRPVYISQPRPPHPRLRREAEPEAE 180


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 481 RVYDTQLMMGASTSTASRPEEYICAALN 564
           +V D   M+  S  TA    EY+C A N
Sbjct: 635 KVADRVSMLMISVITARHAGEYVCTAEN 662


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 325 RTESGPGTRPPLCQLPSAPHPLRRPCANAEQE 230
           R  +G GTR  +CQL      +R    + ++E
Sbjct: 668 RLPNGEGTRADICQLLKDSQYIREQTESDDKE 699


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 310 PGTRPPLCQLPSAPHPLRR 254
           PG+ P +  +PS   P+RR
Sbjct: 436 PGSMPTMPTMPSMAGPIRR 454


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 122 FIVLIVCLIAMACCPDVRRKA 184
           FI+L+  +    C P+V+++A
Sbjct: 4   FIILLALVALGVCAPNVKQRA 24


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 238 EQEALRCREDGQEYEVR 188
           E EAL CR D +  E+R
Sbjct: 20  ELEALLCRRDAEIQELR 36


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 79   FEHREIVSGILTKSLH 126
            FEHR  +SGI   +LH
Sbjct: 986  FEHRHFISGI-DSNLH 1000


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,077
Number of Sequences: 438
Number of extensions: 4135
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)