Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021879
(604 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g03070.1 68414.m00281 expressed protein low similarity to N-m... 77 9e-15
At3g63310.1 68416.m07121 expressed protein low similarity to N-m... 77 1e-14
At4g02690.1 68417.m00364 hypothetical protein low similarity to ... 73 1e-13
At4g14730.1 68417.m02265 transmembrane protein-related low simil... 69 2e-12
At4g15470.1 68417.m02364 expressed protein low similarity to N-m... 64 9e-11
At5g10010.1 68418.m01159 expressed protein 30 1.0
At4g17580.1 68417.m02628 Bax inhibitor-1 family protein / BI-1 f... 30 1.4
At1g63500.1 68414.m07180 protein kinase-related low similarity t... 29 3.1
At1g27660.1 68414.m03381 ethylene-responsive protein -related co... 29 3.1
At4g11660.1 68417.m01864 heat shock factor protein 7 (HSF7) / he... 28 4.1
At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zin... 28 4.1
At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zin... 28 4.1
At5g38530.1 68418.m04659 tryptophan synthase-related low similar... 28 5.5
At5g26130.1 68418.m03108 pathogenesis-related protein, putative ... 28 5.5
At3g54780.2 68416.m06062 zinc finger (C3HC4-type RING finger) fa... 28 5.5
At2g31920.1 68415.m03899 expressed protein 27 7.2
At5g45573.1 68418.m05598 hypothetical protein 27 9.6
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 27 9.6
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 27 9.6
>At1g03070.1 68414.m00281 expressed protein low similarity to
N-methyl-D-aspartate receptor-associated protein
[Drosophila melanogaster] GI:567104; contains Pfam
profile PF01027: Uncharacterized protein family UPF0005
Length = 247
Score = 77.0 bits (181), Expect = 9e-15
Identities = 46/115 (40%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Frame = +1
Query: 271 VLMAVGITAAVCLGLTLF---ALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVK-GKVIT 438
+L A +T V L LT++ A + +DF +G L A IVL+VF ++ IF G++
Sbjct: 131 ILEAAILTTVVVLSLTVYTFWAAKKGYDFNFLGPFLFGALIVLMVFALIQIFFPLGRISV 190
Query: 439 LVYASLGALIFSIYRVYDTQLMMGASTSTASRPEEYICAALNLYLDIINIFLGIL 603
++Y L A+IF Y VYDT ++ + +EYI AA++LYLDIIN+FL +L
Sbjct: 191 MIYGCLAAIIFCGYIVYDTDNLIKRYSY-----DEYIWAAVSLYLDIINLFLALL 240
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 122 FIVLIVC-LIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISARST 259
+IVLI+ LI M +K P N++ L IFT A +F +G++ T
Sbjct: 80 WIVLIITPLIVMCPLYYYHQKHPVNYLLLGIFTVALAFAVGLTCAFT 126
>At3g63310.1 68416.m07121 expressed protein low similarity to
N-methyl-D-aspartate receptor-associated protein
[Drosophila melanogaster] GI:567104; contains Pfam
profile PF01027: Uncharacterized protein family UPF0005
Length = 239
Score = 76.6 bits (180), Expect = 1e-14
Identities = 46/115 (40%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Frame = +1
Query: 271 VLMAVGITAAVCLGLTLF---ALQTKWDFTMMGGVLLCATIVLLVFGIVAI-FVKGKVIT 438
+L +V +TA V + LTL+ A + DF +G L A IVL+VF + I F GK+
Sbjct: 122 ILESVILTAVVVISLTLYTFWAAKRGHDFNFLGPFLFGAVIVLMVFSFIQILFPLGKISV 181
Query: 439 LVYASLGALIFSIYRVYDTQLMMGASTSTASRPEEYICAALNLYLDIINIFLGIL 603
++Y L ++IF Y VYDT ++ + +EYI AA++LYLD+IN+FL +L
Sbjct: 182 MIYGCLASIIFCGYIVYDTDNLIKRHSY-----DEYIWAAVSLYLDVINLFLSLL 231
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 122 FIVLIVC-LIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISARST 259
+I+LI+ LI M +K P N++ L IFT A +F +G++ T
Sbjct: 71 YILLILTPLIVMCPLYYYHQKHPVNYLLLGIFTVALAFAVGLTCAFT 117
>At4g02690.1 68417.m00364 hypothetical protein low similarity to
N-methyl-D-aspartate receptor-associated protein
[Drosophila melanogaster] GI:567104, NMDA receptor
glutamate-binding subunit [Rattus sp.] GI:8248741;
contains Pfam profile PF01027: Uncharacterized protein
family UPF0005
Length = 248
Score = 72.9 bits (171), Expect = 1e-13
Identities = 46/115 (40%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Frame = +1
Query: 271 VLMAVGITAAVCLGLTLF---ALQTKWDFTMMGGVLLCATIVLLVFGIVAI-FVKGKVIT 438
+L +V +T+ V L LTL+ A + +DF +G L A VL+ F ++ I F G+V
Sbjct: 131 ILESVILTSVVVLSLTLYTFWAARKGYDFNFLGPFLFGALTVLIFFALIQILFPLGRVSV 190
Query: 439 LVYASLGALIFSIYRVYDTQLMMGASTSTASRPEEYICAALNLYLDIINIFLGIL 603
++Y L ++IF Y VYDT ++ T +EYI AA++LYLDIIN+FL +L
Sbjct: 191 MIYGCLVSIIFCGYIVYDTDNLIKRHTY-----DEYIWAAVSLYLDIINLFLYLL 240
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 125 IVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISARST 259
+++I LI + +K P N++ L IFT A +F++G++ T
Sbjct: 82 VIIITPLIVLCPLYYYHQKHPVNYLLLGIFTLALAFVVGLTCAFT 126
>At4g14730.1 68417.m02265 transmembrane protein-related low
similarity to transmembrane protein OTMP [Ovis aries]
GI:9965379
Length = 235
Score = 69.3 bits (162), Expect = 2e-12
Identities = 38/115 (33%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
Frame = +1
Query: 271 VLMAVGITAAVCLGLTLF---ALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVK-GKVIT 438
VL A +TA + GLT++ A++ DF+ +G L A +++LVF ++ IF GK+ +
Sbjct: 121 VLEAAILTAVMVFGLTIYTFWAVKRGHDFSFLGPFLFGALLIILVFTLLQIFHPLGKLSS 180
Query: 439 LVYASLGALIFSIYRVYDTQLMMGASTSTASRPEEYICAALNLYLDIINIFLGIL 603
++++ + +++F Y ++DT ++ +EYI AA+ LYLD++N+FL +L
Sbjct: 181 MIFSGIASIVFCGYIIFDTNQLIKKLNY-----DEYITAAIRLYLDVMNLFLSLL 230
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 122 FIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGI 244
F++L++ L+ + +K P N I L+IFT + SF +GI
Sbjct: 71 FVILLLPLLLLWPLLAFEKKHPINCIVLSIFTLSISFSVGI 111
>At4g15470.1 68417.m02364 expressed protein low similarity to
N-methyl-D-aspartate receptor-associated protein
[Drosophila melanogaster] GI:567104; contains Pfam
profile PF01027: Uncharacterized protein family UPF0005
Length = 256
Score = 63.7 bits (148), Expect = 9e-11
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
Frame = +1
Query: 259 EADAVLMAVGITAAVCLGLTLF---ALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVK-G 426
E VL A+ +T +V LT + A + DF+ +G +L + I+L+V + +F G
Sbjct: 135 EGRIVLQALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLG 194
Query: 427 KVITLVYASLGALIFSIYRVYDTQLMMGASTSTASRPEEYICAALNLYLDIINIFLGIL 603
VY AL+F Y VYDT ++ T +EYI A++ LYLDI+N+FL IL
Sbjct: 195 PTSVAVYGGFSALVFCGYIVYDTDNLIKRFTY-----DEYILASVALYLDILNLFLTIL 248
Score = 33.9 bits (74), Expect = 0.083
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 116 NPFIVLIVCLIAMACCPDVR---RKAPTNFIFLAIFTAAQSFLLGISARSTK 262
+P I+L +C++ + +K P N I LA+FT + SF +G+S T+
Sbjct: 84 SPGILLFLCIVPFILIWPLHIYHQKHPVNLILLALFTVSLSFTVGVSCAMTE 135
>At5g10010.1 68418.m01159 expressed protein
Length = 434
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 504 HQLGVVDAV--NGEYESAQGRVHERYDLTFHEYRHDTEYKEDDGGAEQ 367
H+ VVD V NGE E A+G E D D E +ED+ AE+
Sbjct: 42 HEEEVVDEVKENGEEEEAKGDQEEEEDAKPDSLEEDEENQEDEVKAEE 89
>At4g17580.1 68417.m02628 Bax inhibitor-1 family protein / BI-1
family protein similar to SP|Q9LD45 Bax inhibitor-1
(BI-1) (AtBI-1) {Arabidopsis thaliana}; contains Pfam
profile PF01027: Uncharacterized protein family UPF0005
Length = 247
Score = 29.9 bits (64), Expect = 1.4
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = +1
Query: 295 AAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVKGKVITLVYAS-LGALIF 471
A VC L T+ ++ G L C +L I + G + + G LIF
Sbjct: 131 AFVCFSAAAM-LATRREYLYHGASLACCMSILWWVQIASSIFGGSTTVVKFELYFGLLIF 189
Query: 472 SIYRVYDTQLMMGASTSTASRPE-EYICAALNLYLDIINIFLGIL 603
Y V DTQ++ T A + +Y+ + + D ++F+ IL
Sbjct: 190 VGYIVVDTQMI----TEKAHHGDMDYVQHSFTFFTDFASLFVQIL 230
>At1g63500.1 68414.m07180 protein kinase-related low similarity to
protein kinase [Arabidopsis thaliana]; contains Pfam
profile: PF00069 Eukaryotic protein kinase domain
Length = 422
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 510 PHHQL-GVVDAVNGEYESAQGRVHERYDLT-FHEYRHDTEYKEDDGGAEQ 367
P HQL G+ + + S G R DLT HE YK+D+G A +
Sbjct: 255 PSHQLMGIPSSASTTPLSPLGEACLRTDLTAIHEILEKLSYKDDEGAATE 304
>At1g27660.1 68414.m03381 ethylene-responsive protein -related
contains similarity to ethylene-inducible ER33 protein
[Lycopersicon esculentum] gi|5669656|gb|AAD46413
Length = 453
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = -1
Query: 148 DETDYQHYEGIL-LKFHLQSPDVQTSTQ*TSQLIHLTN----TIFVALDEHNQF 2
D++ YQH+EG+L +K L S + + S+ + N T ++ ++EH +
Sbjct: 103 DQSSYQHHEGLLKIKEELSSSTISDHQEGISKFTDMLNSPVITNYLKINEHKDY 156
>At4g11660.1 68417.m01864 heat shock factor protein 7 (HSF7) / heat
shock transcription factor 7 (HSTF7) identical to heat
shock factor protein 7 (HSF7) SP:Q9T0D3 from
[Arabidopsis thaliana]
Length = 377
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/36 (50%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +3
Query: 228 ASCSALAQGLRSGCGA--DGSWHNGGRVPGPDSVRS 329
A CSA G SGCGA G GG G DS RS
Sbjct: 20 AGCSAGNSGGSSGCGAGGGGGGSGGGGGGGGDSQRS 55
>At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 429 LTFHEYRHDTEYKEDDG-GAEQHAAHHGEVPLGLQSEQSQAQAHGRRYAN 283
+T H + HD E+ G G ++H AH L ++Q A +R N
Sbjct: 207 VTTHHHHHDHEHGHSHGHGEDKHHAHGDVTEQLLDKSKTQVAAKEKRKRN 256
>At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 429 LTFHEYRHDTEYKEDDG-GAEQHAAHHGEVPLGLQSEQSQAQAHGRRYAN 283
+T H + HD E+ G G ++H AH L ++Q A +R N
Sbjct: 207 VTTHHHHHDHEHGHSHGHGEDKHHAHGDVTEQLLDKSKTQVAAKEKRKRN 256
>At5g38530.1 68418.m04659 tryptophan synthase-related low similarity
to tryptophan synthases, beta subunit, from Lactococcus
lactis [SP|Q01998], Pyrococcus kodakaraensis
[SP|Q9YGB0], Thermus thermophilus [SP|P16609]; contains
Pfam pyridoxal-phosphate dependent enzyme domain PF00291
Length = 506
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -1
Query: 274 APHPLRRPCANAEQEALRCREDGQEYEVRRSFASHVGTARHRDETDYQHY-EGILLKFHL 98
AP P A +EALRC+E G+ + + H H D T Y Y +G L+
Sbjct: 436 APEPTHAIAATI-REALRCKETGEAKVILMAMCGH----GHFDLTSYDKYLKGELVDLSF 490
Query: 97 QSPDVQTS 74
++ S
Sbjct: 491 SEEKIRES 498
>At5g26130.1 68418.m03108 pathogenesis-related protein, putative
similar to PR-1a protein [Nicotiana tabacum] GI:19944;
contains Pfam profile PF00188: SCP-like extracellular
protein
Length = 164
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 198 YSWPSSRQRRASCSALAQGLRSGCGADGSWHNGGRVPGPDSVR 326
Y+W ++QR+ CS G + +W +GG + G ++V+
Sbjct: 57 YAWNYAQQRKGDCSLTHSNSNGLYGENLAW-SGGALSGAEAVK 98
>At3g54780.2 68416.m06062 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 676
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 153 WRAVPT*DAKLRRTSYSWPSSRQRRASCSALAQGLRSGCG 272
W PT + RR S S SS+ + +CS ++ GCG
Sbjct: 50 WPMTPTPSSYRRRLSRS--SSKSSKQTCSICLNKMKEGCG 87
>At2g31920.1 68415.m03899 expressed protein
Length = 585
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 458 PRDAYTSVMTLPFTNIATIPNTRR 387
P D Y+S + LPFT ++ P T +
Sbjct: 122 PSDLYSSDLLLPFTQVSVSPTTTK 145
>At5g45573.1 68418.m05598 hypothetical protein
Length = 195
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -1
Query: 265 PLRRPCANAEQEALRCREDGQEYEVRRSFASHVGTARHRDETDYQHYEGI 116
P RP +A Q +R + G+E SH+ AR R E + Y GI
Sbjct: 53 PTSRPYISALQN-IRGEKGGEEIARSGRVRSHLPDARIRSEMQMRDYRGI 101
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase
family protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 306 PGPDSVRSADQVGLHHDGRRAALRHHRPPCIRYR 407
P P+ V S VG+ R+ L RPPC+ R
Sbjct: 116 PLPEFVGSGGGVGMFKVPTRSPLHSARPPCLELR 149
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 27.1 bits (57), Expect = 9.6
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 333 DQVGLHHDGRRAALRHHRPPCIRYRGDIRER*GHNARVRVPG-RSHILHLPRLRHPADDG 509
D VG+ RR H + C R + + A ++ G R H R+ +
Sbjct: 127 DLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF 186
Query: 510 GKHKYSISARGVHLRGPQP 566
+H+ + SAR VH P+P
Sbjct: 187 IEHQDNCSARRVHREPPRP 205
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,296,382
Number of Sequences: 28952
Number of extensions: 290151
Number of successful extensions: 917
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -