Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021874
(674 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.038
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 33 0.050
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 31 0.20
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 30 0.35
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.46
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.61
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 28 1.4
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 27 1.9
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 1.9
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 2.5
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 27 3.3
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 26 4.3
SPCC569.08c |ade5|ade8|phosphoribosylglycinamide formyltransfera... 26 5.7
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 26 5.7
SPAC56F8.09 |rrp8||rRNA methyltransferase Rrp8 |Schizosaccharomy... 26 5.7
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 25 7.6
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 25 7.6
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 25 7.6
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 25 7.6
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 7.6
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 25 10.0
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 25 10.0
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 25 10.0
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 33.1 bits (72), Expect = 0.038
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +1
Query: 271 KMAKIEEAS----RIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGV 438
+MA++E+++ + SE+T + T E +E+ RE I LRS L D + V
Sbjct: 960 RMAELEKSNIQQKYLASEKTLEMMNETHEQFKHLVESEISTREEKITSLRSELLDLNKRV 1019
Query: 439 EKTRLTLEQQTAEVYKAIED 498
E + E + E+ K +ED
Sbjct: 1020 EVLKEEKESSSKELAKQLED 1039
Score = 29.9 bits (64), Expect = 0.35
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +1
Query: 262 IAQKMAKIEEASRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVE 441
IA+ +++E + ++ I+A + L A+ E +E+ E +NE R+K+ E +
Sbjct: 1570 IARLRSQLESTKQYYEKEKETEILAARSELVAEKEKTKEELENQLNEKSQRIKELEEQAQ 1629
Query: 442 K 444
K
Sbjct: 1630 K 1630
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 32.7 bits (71), Expect = 0.050
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +3
Query: 456 PGTADRGSVQGHXXXXXXXXXXXXENLKKMIERLREHEEQVRKVRAGNQEKFQQLESSIQ 635
P T+D +V+ E K + ER R+HEE+++++ A N++ ++L +
Sbjct: 331 PTTSDSSNVESSEDVDPASLLQNEEFHKLIEERQRQHEERLKRINA-NKKALEELNQKKR 389
Query: 636 EKLQQAADRRLLI 674
E QQ + L+
Sbjct: 390 ELAQQQLKEQELL 402
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 30.7 bits (66), Expect = 0.20
Identities = 17/80 (21%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 253 EAAIAQKMAKIEEASRIRSE--QTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDH 426
E A K+ ++ +S E T N I++ + + + HEE + ELR++++++
Sbjct: 62 EREYASKLQELAASSADIPEVGSTLNNILSMRTETGSMAKAHEEVSQQINTELRNKIREY 121
Query: 427 LEGVEKTRLTLEQQTAEVYK 486
++ E+ ++ E+Y+
Sbjct: 122 IDQTEQQKVVAANAIEELYQ 141
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 29.9 bits (64), Expect = 0.35
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 277 AKIEEASRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLT 456
AK+EE + E+ K K++ E++ + NELR+R ++ +EK +
Sbjct: 384 AKLEEERALHEEKLMKMEAEMKTIFSQKVQEKEDRLKQSENELRTRHREMKAALEKQKAD 443
Query: 457 L 459
L
Sbjct: 444 L 444
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.46
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +2
Query: 47 AMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAEE 226
A+ ETKST ++ GG A +A P +P P +P P+ E +++
Sbjct: 867 AITPETKST---VNQIMSGGEALAAPVAVPAPIPAPVAEPAPPAAPAKEVVEKAPSPPAT 923
Query: 227 RRRSLEASK 253
R +S K
Sbjct: 924 RPKSTTPQK 932
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.1 bits (62), Expect = 0.61
Identities = 19/88 (21%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +1
Query: 259 AIAQKMAKIEEASRIRSEQTNNF--IVATKEALDAKMETHEEKREAYINELRSRLKDHLE 432
++ +A +++ +I+S + ++ + +A +A++E + I R +HL
Sbjct: 1650 SLEDSVASLQKECKIKSNTVESLQDVLTSVQARNAELEDEVSRSVDKIRRRDDRC-EHLS 1708
Query: 433 G-VEKTRLTLEQQTAEVYKAIEDKMTKL 513
G ++K LE+Q ++A + +MT+L
Sbjct: 1709 GKLKKLHSQLEEQHETFFRAEQQRMTQL 1736
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 170 PEKTPSVEEIQEKLKAAEERRRSLEASK 253
PE TP+VE++ E L E R SL+ +K
Sbjct: 301 PESTPAVEKVSENL--GSETRESLQGAK 326
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 334 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKAIEDKMT 507
A +E + ++E +EA +NE R L+ LEG ++ L++ Q + YK E + T
Sbjct: 5 AVRERRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQEDSQLQKDYKYDESRAT 64
Query: 508 K 510
+
Sbjct: 65 Q 65
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/76 (21%), Positives = 37/76 (48%)
Frame = +1
Query: 286 EEASRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ 465
+E R+ + + ++A +E K E + + + SR+K + +E TR L +
Sbjct: 453 QENDRLVKQVEELTVALNSGKMNAIVEAESSKNELWDSMMVSRMKTQEQSIELTR--LYK 510
Query: 466 QTAEVYKAIEDKMTKL 513
Q ++ + E+K+ ++
Sbjct: 511 QLQDIEEDYENKLMRM 526
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.1 bits (57), Expect = 2.5
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 268 QKMAKIEEASRIRSEQTNNFIVATKE---ALDAKMETHEEKREAYINELRSRLKDHLEGV 438
Q++ K E R+++ N I +E L K+++ ++++ INEL R+K + V
Sbjct: 502 QEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIKSYEVNV 561
Query: 439 EKTRLTLEQ 465
+ T+++
Sbjct: 562 SELNGTIDE 570
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 567 EEQVRKVRAGNQEKFQQLESSIQEK 641
EE+ R ++A NQ +QLE +IQE+
Sbjct: 374 EEERRALKADNQTLQKQLEKAIQER 398
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 26.2 bits (55), Expect = 4.3
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +1
Query: 307 SEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 486
SEQT A + + K E E L++ KD+ ++K LE++ + K
Sbjct: 391 SEQTQLVEEALTKVMKEKYREKENNLELLETNLKTHHKDYKHALKKRITALEEEKNRLIK 450
Query: 487 AIEDKMTK 510
I + K
Sbjct: 451 EIGPEKVK 458
>SPCC569.08c |ade5|ade8|phosphoribosylglycinamide
formyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 207
Score = 25.8 bits (54), Expect = 5.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 101 GGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAE 223
G + + VI A G P+ + T S+E ++EK+ AAE
Sbjct: 151 GAMVHWVIAAVDEGKPIIVQEVPILSTDSIEALEEKIHAAE 191
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 5.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 367 THEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTK 510
T E +RE + + + +++ E + +TR+ LE+Q V IED K
Sbjct: 456 TSESERE--LEKKKEQVEKKQEELMQTRIVLEEQVFLVENMIEDAKAK 501
>SPAC56F8.09 |rrp8||rRNA methyltransferase Rrp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 318
Score = 25.8 bits (54), Expect = 5.7
Identities = 19/102 (18%), Positives = 42/102 (41%)
Frame = +1
Query: 190 RRDPREAEGSRREET*LGS**EAAIAQKMAKIEEASRIRSEQTNNFIVATKEALDAKMET 369
R++ + +G R+ G + +K + + ++SE I K K +
Sbjct: 23 RKEKKRKKGERKNVGDKGEKLNEKVLKKAKSVTTNNSLKSE-----IKKEKSVPSIKEKN 77
Query: 370 HEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE 495
+ + + L+ ++KD L+G + + T E KA++
Sbjct: 78 KGDAKHTKLTSLQQKMKDKLDGANFRWINEQLYTTESDKAVQ 119
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 25.4 bits (53), Expect = 7.6
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 528 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESSIQEKLQQAADRRL 668
E KK ER+R EEQ K + Q + +Q + + K ++A ++R+
Sbjct: 143 EKEKKEKERIRLIEEQ--KHKENEQRRLKQEQIDAKRKEEEAREKRM 187
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 286 EEASRIRSEQTNNFIVATKE 345
+EA+R+R E NNFI A E
Sbjct: 284 QEAARLRVEYNNNFIRAKSE 303
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 155 RRADSPEKTPSVEEIQEKLK 214
RRAD PE+TPS ++ L+
Sbjct: 21 RRADRPEETPSSSVYEQNLR 40
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 7.6
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +1
Query: 286 EEASRIRSEQTNNFIVATKEALDAKMETHE--EKREAYINELRSRLKDHLEGVEKTRLTL 459
++++ + +E+T A + +T E EK EA + + L++ + E+
Sbjct: 369 KDSTSVEAEKTETDEPAVGKGASDVSDTAEISEKTEAKNADSEANLEEKSDVGEEKESKD 428
Query: 460 EQQTAEVYKAIEDKMTKL 513
E A ++K +E+K TK+
Sbjct: 429 ENNKASLHKDVEEKDTKI 446
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 2 DAVQLVRSLCRLKVEAMEVETKSTEIRCQEMSKGGLAYE 118
D L L R + +E E ++ +C E K L YE
Sbjct: 2536 DEHDLYHGLWRRRANFLETEVATSHEQCHEWEKAQLVYE 2574
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +1
Query: 364 ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTK 510
E +EE + + E +++K+ +KTR + EQQT ++ + ++ + K
Sbjct: 402 EKNEEVKS--LREKAAKVKNDCTSEKKTRQSYEQQTVKIEEQLKFLLNK 448
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 25.0 bits (52), Expect = 10.0
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +1
Query: 265 AQKMAKIEEASRIRSEQTNNFIVATKEAL---DAKMETHEEKREAYINELRSRLKDHLEG 435
A+++++ E E + + T E + D K E H E+R + R ++ LE
Sbjct: 81 AEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAE-HFERRVQSLERERDDMEQKLEE 139
Query: 436 VEKTRLTLEQQTAEVYKAIED 498
+ ++ + EV++A+ED
Sbjct: 140 MTDKYTKVKAELDEVHQALED 160
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 25.0 bits (52), Expect = 10.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 119 VILAEPVGVPVPRRADSPEKTPSVEEIQEKL 211
V L +P+ P P A+S + T S E++ +L
Sbjct: 182 VSLPQPIAAPAPPSAESSKSTISDEDVAWQL 212
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,070,370
Number of Sequences: 5004
Number of extensions: 33267
Number of successful extensions: 178
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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