Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021874
(674 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011) 42 5e-04
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 34 0.12
SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 31 0.85
SB_14482| Best HMM Match : Cornifin (HMM E-Value=3.7) 31 1.1
SB_12374| Best HMM Match : SlyX (HMM E-Value=1.2) 30 1.5
SB_46938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_29515| Best HMM Match : TolA (HMM E-Value=0.031) 30 1.5
SB_18068| Best HMM Match : Ribosomal_L22e (HMM E-Value=2.3) 30 1.5
SB_40386| Best HMM Match : BAR (HMM E-Value=0) 30 2.0
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 30 2.0
SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 29 2.6
SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042) 29 3.4
SB_49546| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12) 29 3.4
SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17) 29 3.4
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 29 3.4
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 29 3.4
SB_8501| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_1330| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.9) 29 4.5
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 29 4.5
SB_364| Best HMM Match : Tim17 (HMM E-Value=0.45) 29 4.5
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 28 6.0
SB_23458| Best HMM Match : MCPVI (HMM E-Value=1.4) 28 6.0
SB_21688| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_11059| Best HMM Match : KID (HMM E-Value=0.046) 28 6.0
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_56374| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 28 6.0
SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014) 28 7.9
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 28 7.9
SB_21209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_1179| Best HMM Match : IQ (HMM E-Value=1e-04) 28 7.9
SB_58439| Best HMM Match : L15 (HMM E-Value=1e-05) 28 7.9
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_18590| Best HMM Match : FYVE (HMM E-Value=8.8e-29) 28 7.9
SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)
Length = 299
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/75 (30%), Positives = 40/75 (53%)
Frame = +1
Query: 280 KIEEASRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTL 459
++ A I EQ +E + KME +EKR++Y+ L++RL + VE+ R T+
Sbjct: 182 RVRVAQSIAQEQIEQQSKLIEEKIMQKMEMTKEKRDSYMEALKTRLHEKSLDVEQKRQTM 241
Query: 460 EQQTAEVYKAIEDKM 504
E+ K +E+K+
Sbjct: 242 EEIQMFQRKILEEKL 256
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 549 ERLREHEEQVRKVRAGNQEKFQQLESSIQEKLQQ 650
E+L+ HE +VR ++ QE+ +Q I+EK+ Q
Sbjct: 174 EKLQAHERRVRVAQSIAQEQIEQQSKLIEEKIMQ 207
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/84 (22%), Positives = 47/84 (55%)
Frame = +1
Query: 262 IAQKMAKIEEASRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVE 441
+A + K ++ R ++ Q + + ++ + + + H EK EA NE++ + K+ L+ +
Sbjct: 432 MATEQEKESKSLRKKNNQLEDELTNQGKSKEQEAQEHSEKYEALKNEMQQQGKEWLKQDK 491
Query: 442 KTRLTLEQQTAEVYKAIEDKMTKL 513
++ +E++ E K++ D++ KL
Sbjct: 492 ESHKQIEEREKEC-KSLRDEVRKL 514
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/73 (26%), Positives = 40/73 (54%)
Frame = +1
Query: 286 EEASRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ 465
+E R+++E +N KE +M T +EK + + ++L+D L K++ Q
Sbjct: 413 KEMHRLKNEWSN------KEKEYKRMATEQEKESKSLRKKNNQLEDELTNQGKSKEQEAQ 466
Query: 466 QTAEVYKAIEDKM 504
+ +E Y+A++++M
Sbjct: 467 EHSEKYEALKNEM 479
>SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 283 IEEASRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEG-VEKTRLTL 459
++E R+ E + A ++AL+A +E R+ + ELR ++ + E +E+ R+
Sbjct: 38 LDELRRVMQEDKDQ---AIRDALNAAEAKAQEDRKQALEELRKKMNEEREQCLEQARIRA 94
Query: 460 EQQTAEV 480
E+Q AE+
Sbjct: 95 EEQMAEI 101
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/37 (35%), Positives = 26/37 (70%)
Frame = +3
Query: 531 NLKKMIERLREHEEQVRKVRAGNQEKFQQLESSIQEK 641
+L+ M+E+ R+ E++ K+ +++K QQLE+ +Q K
Sbjct: 1231 DLQSMVEQDRQRAERMEKLALEHEKKVQQLETELQSK 1267
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 528 ENLKKMIER-LREHEEQVRKVRAGNQEKFQQLESSIQEKLQQ 650
E K++I + L EE++ +VR Q+K +QLE+ ++E+ Q+
Sbjct: 2276 ERDKQLISKELEAKEEELEEVRYSMQKKIKQLEAQLEEEYQE 2317
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 31.1 bits (67), Expect = 0.85
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 262 IAQKMAKIEEASR--IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEG 435
IA K A++ E +SEQ + + ++++ E RE I++L LKD
Sbjct: 108 IASKEAELRELGEKLTKSEQEKSDELGKVWETMTELQSVIEDREKSIDKLEKELKDQEAK 167
Query: 436 VEKTRLTLEQQTAEVYKAIEDK 501
+ + TLEQ A++ + +E K
Sbjct: 168 HNRQKNTLEQTVAKMKEVMERK 189
>SB_14482| Best HMM Match : Cornifin (HMM E-Value=3.7)
Length = 301
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 527 REPQEDDRASART*GTSSQGPRR*PGEVPAARELHPGEAAAGRR 658
+EP + R ART + P R P A HPG AGRR
Sbjct: 22 QEPGKPAREPARTPVAALPAPARVTSPEPPATRPHPGRVEAGRR 65
>SB_12374| Best HMM Match : SlyX (HMM E-Value=1.2)
Length = 157
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 38 KVEAMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKA 217
++E + KSTE+R QE YE +E + +T +E ++EK +
Sbjct: 46 ELEPLAEMLKSTELRLQEAQDRLFTYERRASEHTKLIAELTQKVESQTDQLEHMREKYRL 105
Query: 218 AEERRRSLE 244
++ RSL+
Sbjct: 106 TQDEYRSLQ 114
>SB_46938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 38 KVEAMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKA 217
++E + KSTE+R QE YE +E + +T +E ++EK +
Sbjct: 67 ELEPLAEMLKSTELRLQEAQDRLFTYERRASEHTKLIAELTQKVESQTDQLEHMREKYRL 126
Query: 218 AEERRRSLE 244
++ RSL+
Sbjct: 127 TQDEYRSLQ 135
>SB_29515| Best HMM Match : TolA (HMM E-Value=0.031)
Length = 592
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 280 KIEEASRIRSEQT-NNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLT 456
++EEA+R E+ N + + AL KM EE ELR RL+D E+ R
Sbjct: 449 ELEEAARREEEERIRNMEESERLALQEKMRREEE-------ELRRRLEDQRRREEEERRV 501
Query: 457 LEQQ 468
LE+Q
Sbjct: 502 LEEQ 505
>SB_18068| Best HMM Match : Ribosomal_L22e (HMM E-Value=2.3)
Length = 258
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/77 (25%), Positives = 36/77 (46%)
Frame = +1
Query: 283 IEEASRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLE 462
+EE R+ Q + +T A E+ E E +R +D L G+++ L
Sbjct: 149 LEEEKRMLKLQALITVCSTNIGKYALGYLQLEQNELEHQEELNRARDQLTGMQRGNLQEN 208
Query: 463 QQTAEVYKAIEDKMTKL 513
+ ++ + ++DKMTKL
Sbjct: 209 VELIKLQRDVKDKMTKL 225
>SB_40386| Best HMM Match : BAR (HMM E-Value=0)
Length = 369
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 8 VQLVRSLCRLKVEAMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRA--DSPEKT 181
+ ++ LC+L V+ +E KSTE E++ L ++ A A +PE+
Sbjct: 207 MDMIEQLCQLVVDMLEYHKKSTE--SLEIAMSQLNKRIVNARRNQAEAEASAPKQAPEEP 264
Query: 182 PSVEEIQEKLKAAEERRRSLEAS 250
+V E EK ++E + + E S
Sbjct: 265 ENVPEQHEKAPESDEEQGNGETS 287
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/58 (24%), Positives = 34/58 (58%)
Frame = +1
Query: 340 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTKL 513
+E ++ T E EA +++L + EG+ +++++L++ +E++ +EDK +L
Sbjct: 447 QEDIERHQLTKERLHEA-VSDLLELTRGETEGLRESQISLDENWSELWALLEDKEEEL 503
>SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 504
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 53 EVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKT--PSVEEIQEKLKAAEE 226
E E TE + ++ G + + LA +GV P ADS E+ P +EK E
Sbjct: 285 EEENSETEEQPRKPVGGPINFAAELASKIGVAPPPAADSDEEAAEPGAWSDEEKKPQQPE 344
Query: 227 RRRS 238
++RS
Sbjct: 345 KQRS 348
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 256 AAIAQKMAKIEEASRIRSEQTNNFIVATKEALDAKMETHEEKREAYI---NELRSRLKDH 426
A +++KMA+ EE +R+R + + ++ A +AK + E + N+ S LK
Sbjct: 1263 ANLSRKMAETEEDNRVREKDLTTALDESRRA-EAKAVDKVKNLENILDNANQDNSDLKLK 1321
Query: 427 LEGVEKTRLTLEQQTAEVYKAIEDKMTKL 513
+ G E LE Q A + A D KL
Sbjct: 1322 MSGAEGRITGLEAQLARMEGAKNDLEFKL 1350
>SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1090
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 53 EVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKT--PSVEEIQEKLKAAEE 226
E E TE + ++ G + + LA +GV P ADS E+ P +EK E
Sbjct: 149 EEENSETEEQPRKPVGGPINFAAELASKIGVAPPPAADSDEEAAEPGAWSDEEKKPQQPE 208
Query: 227 RRRS 238
++RS
Sbjct: 209 KQRS 212
>SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042)
Length = 440
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +1
Query: 346 ALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMT 507
AL K + + +N+ +L + +EG++ T +TL+QQ ++ + + + T
Sbjct: 235 ALQKKYSDELKSSQDELNDFVIQLDEEVEGMQSTIMTLQQQIKDIKQRLATETT 288
>SB_49546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1214
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 286 EEASRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDH 426
EE + +E +NF+VA + A M++ E + + + RSR +H
Sbjct: 1125 EETTSSTAETGSNFLVAVLNNMQASMQSSNELLKELVIQKRSRSPNH 1171
>SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12)
Length = 379
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 400 ELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTKL 513
E+R L D +EGVE + LE Q + IE+ K+
Sbjct: 226 EMRKVLHDSMEGVEAEKRELENQAQNCKQEIEEATNKI 263
>SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17)
Length = 605
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 400 ELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTKL 513
E+R L D +EGVE + LE Q + IE+ K+
Sbjct: 226 EMRKVLHDSMEGVEAEKRELENQAQNCKQEIEEATNKI 263
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +2
Query: 464 SRPRKCTRP-----SKIR*PSCRQA*REPQEDDRASART*GTSSQGPRR*PGEVPAAREL 628
SR K ++P S+ R SC+ +PQ+ D+ S R S + + P + AAR+
Sbjct: 877 SRKTKTSKPQHKQASRPRHASCKTMASKPQDQDKQSTRPGQKSRKTRTKKPQDKQAARQS 936
Query: 629 HPGEAA 646
P +A+
Sbjct: 937 RPRQAS 942
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 KMAKIEEA-SRIRSEQTNNFIVATK-EALDAKMETHEEKREAYINELRSRLKDHLEGVEK 444
K A E+ SR+ SE + I K + +A +E ++K + INE R +L++ ++
Sbjct: 1446 KAASAEKTRSRLNSELEDALIDLEKAQTNNANLEKKQKKIDIQINEWRVKLEEVQADLDN 1505
Query: 445 TRLTLEQQTAEVYK 486
++ + E+YK
Sbjct: 1506 SQKEARNYSTEMYK 1519
>SB_8501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 543
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 534 LKKMIERLREHEEQVRKVRAGNQEKFQQLESSI 632
LKK+++ E E + K NQ+K ++L++SI
Sbjct: 68 LKKVVKTAEEKREALEKELKKNQQKLEELQASI 100
>SB_1330| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.9)
Length = 482
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 527 REPQEDDRASART*GTSSQGPRR*PGEVPAARELHPGEAAAGRR 658
+EP + + ART + GP R P A HPG AGRR
Sbjct: 93 QEPGKRHQEPART--PVAAGPARITSPEPPATRPHPGRVEAGRR 134
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 340 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 474
K+ D+ E H+E ++ + E K H+E ++ T + +EQQ A
Sbjct: 1422 KKVQDSSNEIHKENQD--LREELKMAKRHIESLKSTLIQVEQQAA 1464
>SB_364| Best HMM Match : Tim17 (HMM E-Value=0.45)
Length = 437
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/60 (35%), Positives = 25/60 (41%)
Frame = +2
Query: 479 CTRPSKIR*PSCRQA*REPQEDDRASART*GTSSQGPRR*PGEVPAARELHPGEAAAGRR 658
C +P+ S A QE ART S+ R E PA R HPG+ GRR
Sbjct: 9 CAQPAGTANGSAEPADEHHQEAAHEPART--PSALVERITSPEPPATRPKHPGQVETGRR 66
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 262 IAQKMAKIEEASR--IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEG 435
IA K A++ E +SEQ + + ++++ E R I++L LKD
Sbjct: 552 IASKEAELRELGEKLTKSEQEKSDELGKVWETMTELQSVIEDRGKSIDKLEKELKDQEAK 611
Query: 436 VEKTRLTLEQQTAEVYKAIEDK 501
+ + TLEQ A++ + +E K
Sbjct: 612 HNRQKNTLEQTVAKMKEVMERK 633
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +1
Query: 358 KMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTKL 513
+ME+ +EK E+ + ELR++L D LE + T +E++ E+ E ++ +L
Sbjct: 118 EMESEQEKHESELEELRAQL-DKLENSD-TESLVEERMKELKANYEREVEEL 167
>SB_23458| Best HMM Match : MCPVI (HMM E-Value=1.4)
Length = 770
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 605 EVPAARELHPGEAAAGRR 658
E PAAR HPG AGRR
Sbjct: 225 EPPAARPKHPGRVEAGRR 242
>SB_21688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1078
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 531 NLKKMIERLREHEEQVRKVRAGNQEKFQQLESSIQEKLQQAADRR 665
N++KM+E R+ + K+R N F Q ++ Q L ++ R
Sbjct: 225 NVQKMLENSRQENSRTLKIRGQNSAFFSQQLTAFQVWLAMGSEMR 269
>SB_11059| Best HMM Match : KID (HMM E-Value=0.046)
Length = 296
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 262 IAQKMAKIEEASR--IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEG 435
IA K A++ E +SEQ + + ++++ E R I++L LKD
Sbjct: 16 IASKEAELRELGEKLTKSEQEKSDELGKVWETMTELQSVIEDRGKSIDKLEKELKDQEAK 75
Query: 436 VEKTRLTLEQQTAEVYKAIEDK 501
+ + TLEQ A++ + +E K
Sbjct: 76 HNRQKNTLEQTVAKMKEVMERK 97
>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +3
Query: 531 NLKKMIERLREHEEQVRKVRAGNQEKFQQLESSIQEKLQQAA 656
+L+ + R++E EE+ K+R + E+ +LE S+ K Q+AA
Sbjct: 301 SLEAALRRVKELEEENAKIRKQSAEEKDELEKSV--KRQEAA 340
>SB_56374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 483
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 158 RADSPEKTPSVEEIQEKLKAAEERRRSLEASK 253
+A KT + +QEKL+A RRR +E K
Sbjct: 438 KAQELNKTRVEQGLQEKLRARRSRRRKMEVEK 469
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 99 FDISWQRISVDLVSTSMASTFNRQRLRTS 13
+DI WQ ++++ ++ + NR+RL TS
Sbjct: 1447 YDILWQDVNIEKINQELLDFQNRRRLTTS 1475
>SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014)
Length = 988
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 527 REPQEDDRASART*GTSSQGPRR*PGEVPAARELHPGEAAAGRR 658
+EP + R ART + R P A HPG AGRR
Sbjct: 797 QEPGKQRREPARTPVAALPAAARVTSPEPPATRPHPGRVEAGRR 840
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = +1
Query: 274 MAKIEEASRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRL 453
M +++A+ R+++ N ++ T+ D + E Y LR + +DH V +
Sbjct: 412 MRDLDKANE-RNKELNESVIQTQSEKDTIKHSLHMMEEQY-KGLRQQQEDHRSTVNELET 469
Query: 454 TLEQQTAEVYKAIEDKMT 507
LE + ++ A E+K T
Sbjct: 470 KLEVLSKKLLVANEEKST 487
>SB_21209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 176 KTPSVEEIQEKLKAAEERRR 235
K P + E+QEKLKA +E RR
Sbjct: 281 KDPKLLELQEKLKAKKEERR 300
>SB_1179| Best HMM Match : IQ (HMM E-Value=1e-04)
Length = 474
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/82 (18%), Positives = 39/82 (47%)
Frame = +1
Query: 259 AIAQKMAKIEEASRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGV 438
++ +++ ++++ +Q N I K+ L +M+ YI + RLK ++
Sbjct: 225 SLQRQLVEVKKEKESEIQQRNEMIAHLKDQLQ-EMKAKTSMEGKYIKKDAERLKFKIDEE 283
Query: 439 EKTRLTLEQQTAEVYKAIEDKM 504
E+ +E + ++ +E+K+
Sbjct: 284 ERVNNEIEAYLKQHHQILEEKV 305
>SB_58439| Best HMM Match : L15 (HMM E-Value=1e-05)
Length = 203
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 56 VETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEK-TPSVEEIQEK--LKAAEE 226
+E + +I C +K GL + + G P+PRRA P K P ++ + L AE+
Sbjct: 127 IERQGGKITCAHYNKLGLRVLLKPEKFEGKPIPRRAHPPSKLLPYYSSVEHRGYLADAEQ 186
Query: 227 -RRRSLEASK 253
+ LE+ K
Sbjct: 187 VEKARLESRK 196
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +2
Query: 587 PRR*PGEVPAARELHPGEAAAGRR 658
P R P E PA R HPG AGRR
Sbjct: 1064 PARTP-EPPATRPKHPGRVEAGRR 1086
>SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +3
Query: 528 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESSIQEKLQQAADRRL 668
E ++ ++R +E +EQ RK +E+ ++ + K ++ AD+ L
Sbjct: 993 EKRERELQRKKERDEQKRKKEEEKREREEKKRKEEERKRREKADKEL 1039
>SB_18590| Best HMM Match : FYVE (HMM E-Value=8.8e-29)
Length = 551
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 337 TKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA--EVYKAIEDKMTK 510
+K K+E+ +E ++ INEL + + EG+++ E++ + E+ K +E+K K
Sbjct: 26 SKNLYAKKLESEKELQD-KINELNTEISSLQEGMQELGTIAEKEISLDEMQKCLEEKEDK 84
Query: 511 L 513
L
Sbjct: 85 L 85
>SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 313 QTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEK--TRLTLEQQTAEVYK 486
QT I+ E ME + + E EL +L+ K T+L L Q+TAE YK
Sbjct: 401 QTQILILQVHEDYRKLMEQKQAEEERCRKELEEKLQTLERDSHKYRTKLELAQKTAETYK 460
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,490,051
Number of Sequences: 59808
Number of extensions: 297408
Number of successful extensions: 1585
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1584
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -