Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021873X
         (402 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70852-3|AAK29822.1|  836|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z79599-1|CAB01871.4|  493|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z79597-3|CAB01862.4|  493|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z73425-1|CAA97784.1|   97|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AF106592-4|AAK21366.1|  786|Caenorhabditis elegans Hypothetical ...    27   6.7  
Z27079-1|CAA81593.2|  411|Caenorhabditis elegans Hypothetical pr...    26   8.8  

>U70852-3|AAK29822.1|  836|Caenorhabditis elegans Hypothetical
           protein F45E4.3b protein.
          Length = 836

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 51  LKVTSHISSAGERPLRSLAERARRHAR 131
           L++T       +R LR   ERARRH+R
Sbjct: 397 LEITKKYFEDYDRQLREFGERARRHSR 423


>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
           protein F45E4.3a protein.
          Length = 1231

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 51  LKVTSHISSAGERPLRSLAERARRHAR 131
           L++T       +R LR   ERARRH+R
Sbjct: 397 LEITKKYFEDYDRQLREFGERARRHSR 423


>Z79599-1|CAB01871.4|  493|Caenorhabditis elegans Hypothetical
           protein C33A11.4 protein.
          Length = 493

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 76  APASGRSVPWPSALGATRVTSHARVT 153
           APA  R+ PWP+AL + + T+    T
Sbjct: 34  APAPQRASPWPAALASPQQTTFTSPT 59


>Z79597-3|CAB01862.4|  493|Caenorhabditis elegans Hypothetical
           protein C33A11.4 protein.
          Length = 493

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 76  APASGRSVPWPSALGATRVTSHARVT 153
           APA  R+ PWP+AL + + T+    T
Sbjct: 34  APAPQRASPWPAALASPQQTTFTSPT 59


>Z73425-1|CAA97784.1|   97|Caenorhabditis elegans Hypothetical
           protein F12F6.2 protein.
          Length = 97

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -2

Query: 272 KE*IINEHLIICCETFEFCLERGGLLKPVMTRHTL 168
           KE ++ E +++C  +F   LE    L+P ++R  L
Sbjct: 61  KEMMMKETMVVCVRSFSDALETSQRLRPFLSRVVL 95


>AF106592-4|AAK21366.1|  786|Caenorhabditis elegans Hypothetical
           protein D1037.1 protein.
          Length = 786

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = +3

Query: 63  SHISSAGERPLRSLAERARRHARDVTRARHRLPRRQR 173
           SH SS       S   R R  +RD  R R R P R R
Sbjct: 249 SHSSSDRRGRRTSKESRRRSRSRDTHRTRRRSPERSR 285


>Z27079-1|CAA81593.2|  411|Caenorhabditis elegans Hypothetical
           protein T05G5.1 protein.
          Length = 411

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 96  RSLAERARRHARDVTRARHRLPRRQRVTRHHWFKKTAPFEAE 221
           R +AER R+   D  RA     RRQ+    +W ++TA  E +
Sbjct: 115 RQVAERTRKEKEDRERASDEERRRQQ-HEQYWKEETARREQQ 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,707,520
Number of Sequences: 27780
Number of extensions: 115110
Number of successful extensions: 319
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)