Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021872
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.1  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   3.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   3.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   3.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   3.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   3.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.9  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.6  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   RSSLSQHYVQHSGARSRPISCR 68
           +S+L  HY  H+G   RP  C+
Sbjct: 147 KSALQMHYRTHTG--ERPFKCK 166


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 493 HGVWKPTVDRLC 458
           HGVWKP     C
Sbjct: 67  HGVWKPDASYKC 78


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 493 HGVWKPTVDRLC 458
           HGVWKP     C
Sbjct: 67  HGVWKPDASYKC 78


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 493 HGVWKPTVDRLC 458
           HGVWKP     C
Sbjct: 67  HGVWKPDASYKC 78


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 493 HGVWKPTVDRLC 458
           HGVWKP     C
Sbjct: 67  HGVWKPDASYKC 78


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 493 HGVWKPTVDRLC 458
           HGVWKP     C
Sbjct: 67  HGVWKPDASYKC 78


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 315 VRCVLGLHSAEV 280
           VRCVL LH A V
Sbjct: 327 VRCVLSLHCAAV 338


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 533 KTSRSGGEXHDLGSRSLEANS 471
           +TS SG    +LG R  +ANS
Sbjct: 160 RTSPSGQHLQELGLRLEDANS 180


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 533 KTSRSGGEXHDLGSRSLEANS 471
           +TS SG    +LG R  +ANS
Sbjct: 160 RTSPSGQHLQELGLRLEDANS 180


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 533 KTSRSGGEXHDLGSRSLEANS 471
           +TS SG    +LG R  +ANS
Sbjct: 160 RTSPSGQHLQELGLRLEDANS 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,031
Number of Sequences: 336
Number of extensions: 2626
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)