Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021872
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032639-6|CAA21630.1| 405|Caenorhabditis elegans Hypothetical ... 84 7e-17
AF053067-1|AAC35273.1| 405|Caenorhabditis elegans cyclin D prot... 84 7e-17
U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protei... 62 2e-10
U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protei... 62 2e-10
AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E prot... 62 2e-10
AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E prot... 62 2e-10
Z29116-3|CAA82372.1| 485|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U20902-1|AAA84393.1| 485|Caenorhabditis elegans cyclin A protein. 59 3e-09
Z70312-5|CAA94384.1| 361|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U20903-1|AAA84394.1| 361|Caenorhabditis elegans cyclin B protein. 52 3e-07
AL021176-1|CAA15975.2| 317|Caenorhabditis elegans Hypothetical ... 48 6e-06
AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b prot... 48 6e-06
AF026213-1|AAB71309.1| 130|Caenorhabditis elegans Hypothetical ... 36 0.024
AC006648-6|AAP68938.1| 123|Caenorhabditis elegans Cyclin a prot... 35 0.056
Z81077-6|CAB03069.1| 167|Caenorhabditis elegans Hypothetical pr... 28 4.8
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 28 4.8
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 28 4.8
U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical pr... 28 6.4
AC084158-13|AAK68570.1| 337|Caenorhabditis elegans Hypothetical... 27 8.4
>AL032639-6|CAA21630.1| 405|Caenorhabditis elegans Hypothetical
protein Y38F1A.5 protein.
Length = 405
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/117 (32%), Positives = 66/117 (56%)
Frame = +1
Query: 277 NYFGTVQTENTPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLL 456
+YF VQ TP R +W+ +V ++ C +VF LA+S +DRF+S+ + K +Q++
Sbjct: 91 HYFTGVQENITPFHREQAIDWIYDVAKEENCDGDVFLLAVSLIDRFMSVQNILKHDIQMI 150
Query: 457 GTACLLLASKLREPRSCXSPPDLLVFYTANSITLTDLCSWELLVLSKLKWDVAGVTA 627
L +ASKL+ P + + +Y+ NS + + WELL+++ L+W+ TA
Sbjct: 151 AGVALFIASKLKAPHPMTA--SKIAYYSDNSCPIDMILQWELLIVTTLQWETESPTA 205
>AF053067-1|AAC35273.1| 405|Caenorhabditis elegans cyclin D
protein.
Length = 405
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/117 (32%), Positives = 66/117 (56%)
Frame = +1
Query: 277 NYFGTVQTENTPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLL 456
+YF VQ TP R +W+ +V ++ C +VF LA+S +DRF+S+ + K +Q++
Sbjct: 91 HYFTGVQENITPFHREQAIDWIYDVAKEENCDGDVFLLAVSLIDRFMSVQNILKHDIQMI 150
Query: 457 GTACLLLASKLREPRSCXSPPDLLVFYTANSITLTDLCSWELLVLSKLKWDVAGVTA 627
L +ASKL+ P + + +Y+ NS + + WELL+++ L+W+ TA
Sbjct: 151 AGVALFIASKLKAPHPMTA--SKIAYYSDNSCPIDMILQWELLIVTTLQWETESPTA 205
>U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protein
1, isoform b protein.
Length = 521
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +1
Query: 319 RRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV--GKSQVQLLGTACLLLASKLR 492
RR++ +WM+EVCE E F LA+ ++DR+L V QL+GTA L +A+K
Sbjct: 259 RRILIDWMMEVCESEKLHRETFHLAVDYVDRYLESSNVECSTDNFQLVGTAALFIAAKYE 318
Query: 493 EPRSCXSPPDLLVF--YTANSITLTDLCSWELLVLSKLKWDVAGVTA 627
E PP + F T ++ T ++ + E+L++ + W + +T+
Sbjct: 319 E----IYPPKCIDFAHLTDSAFTCDNIRTMEVLIVKYIGWSLGPITS 361
>U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protein
1, isoform a protein.
Length = 524
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +1
Query: 319 RRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV--GKSQVQLLGTACLLLASKLR 492
RR++ +WM+EVCE E F LA+ ++DR+L V QL+GTA L +A+K
Sbjct: 262 RRILIDWMMEVCESEKLHRETFHLAVDYVDRYLESSNVECSTDNFQLVGTAALFIAAKYE 321
Query: 493 EPRSCXSPPDLLVF--YTANSITLTDLCSWELLVLSKLKWDVAGVTA 627
E PP + F T ++ T ++ + E+L++ + W + +T+
Sbjct: 322 E----IYPPKCIDFAHLTDSAFTCDNIRTMEVLIVKYIGWSLGPITS 364
>AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +1
Query: 319 RRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV--GKSQVQLLGTACLLLASKLR 492
RR++ +WM+EVCE E F LA+ ++DR+L V QL+GTA L +A+K
Sbjct: 262 RRILIDWMMEVCESEKLHRETFHLAVDYVDRYLESSNVECSTDNFQLVGTAALFIAAKYE 321
Query: 493 EPRSCXSPPDLLVF--YTANSITLTDLCSWELLVLSKLKWDVAGVTA 627
E PP + F T ++ T ++ + E+L++ + W + +T+
Sbjct: 322 E----IYPPKCIDFAHLTDSAFTCDNIRTMEVLIVKYIGWSLGPITS 364
>AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +1
Query: 319 RRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV--GKSQVQLLGTACLLLASKLR 492
RR++ +WM+EVCE E F LA+ ++DR+L V QL+GTA L +A+K
Sbjct: 262 RRILIDWMMEVCESEKLHRETFHLAVDYVDRYLESSNVECSTDNFQLVGTAALFIAAKYE 321
Query: 493 EPRSCXSPPDLLVF--YTANSITLTDLCSWELLVLSKLKWDVAGVTA 627
E PP + F T ++ T ++ + E+L++ + W + +T+
Sbjct: 322 E----IYPPKCIDFAHLTDSAFTCDNIRTMEVLIVKYIGWSLGPITS 364
>Z29116-3|CAA82372.1| 485|Caenorhabditis elegans Hypothetical
protein ZK507.6 protein.
Length = 485
Score = 58.8 bits (136), Expect = 3e-09
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Frame = +1
Query: 292 VQTENTPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACL 471
+Q++ MR ++ +W +V ++ Q+E F LA+S +DR LS+ + K + QL+GT +
Sbjct: 236 IQSQVNEEMRTILIDWFSDVVKEYNFQKETFHLAVSLVDRALSMFNIDKMRFQLVGTTSM 295
Query: 472 LLASKLREPRSCXSPPDL--LVFYTANSITLTDLCSWELLVLSKLKWDVAGVTA 627
++A K E PP++ T N+ + D+ E +L K + VA T+
Sbjct: 296 MIAVKYEE----IFPPEIEDFALITDNTYRVPDILLMERFLLGKFDFVVAMPTS 345
>U20902-1|AAA84393.1| 485|Caenorhabditis elegans cyclin A protein.
Length = 485
Score = 58.8 bits (136), Expect = 3e-09
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Frame = +1
Query: 292 VQTENTPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACL 471
+Q++ MR ++ +W +V ++ Q+E F LA+S +DR LS+ + K + QL+GT +
Sbjct: 236 IQSQVNEEMRTILIDWFSDVVKEYNFQKETFHLAVSLVDRALSMFNIDKMRFQLVGTTSM 295
Query: 472 LLASKLREPRSCXSPPDL--LVFYTANSITLTDLCSWELLVLSKLKWDVAGVTA 627
++A K E PP++ T N+ + D+ E +L K + VA T+
Sbjct: 296 MIAVKYEE----IFPPEIEDFALITDNTYRVPDILLMERFLLGKFDFVVAMPTS 345
>Z70312-5|CAA94384.1| 361|Caenorhabditis elegans Hypothetical
protein ZC168.4 protein.
Length = 361
Score = 52.4 bits (120), Expect = 3e-07
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +1
Query: 301 ENTPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLA 480
E TP MRR++ +W+++V E L + LDR L K+ +QLLG + + +A
Sbjct: 104 EPTPKMRRILVDWLVQVHVRFHLTPETLHLTVFILDRMLQKKVTSKADLQLLGISAMFVA 163
Query: 481 SKLREPRSCXSPPDL--LVFYTANSITLTDLCSWELLVLSKLKWDVA 615
SK E PD+ F T N+ + + + E +L+ L +D++
Sbjct: 164 SKFEE----VYLPDIHDYEFITENTYSKKQILAMEQTILNSLNFDLS 206
>U20903-1|AAA84394.1| 361|Caenorhabditis elegans cyclin B protein.
Length = 361
Score = 52.4 bits (120), Expect = 3e-07
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +1
Query: 301 ENTPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLA 480
E TP MRR++ +W+++V E L + LDR L K+ +QLLG + + +A
Sbjct: 104 EPTPKMRRILVDWLVQVHVRFHLTPETLHLTVFILDRMLQKKVTSKADLQLLGISAMFVA 163
Query: 481 SKLREPRSCXSPPDL--LVFYTANSITLTDLCSWELLVLSKLKWDVA 615
SK E PD+ F T N+ + + + E +L+ L +D++
Sbjct: 164 SKFEE----VYLPDIHDYEFITENTYSKKQILAMEQTILNSLNFDLS 206
>AL021176-1|CAA15975.2| 317|Caenorhabditis elegans Hypothetical
protein Y43E12A.1 protein.
Length = 317
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +1
Query: 316 MRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLRE 495
MRR++ +W+++V E L I LDR + V K++ QLLG A L +ASK +
Sbjct: 62 MRRILVDWLIQVHLRFHLTPETLHLTIFVLDRIIVKNIVSKAEFQLLGVAALFVASKFED 121
Query: 496 PRSCXSPPDLLVF--YTANSITLTDLCSWELLVLSKLKWDVA 615
PD+L + T N+ + + + E +L+ L +D++
Sbjct: 122 ----IYLPDILEYEMITDNTFSKKQIMAMEQTILNALNFDLS 159
>AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b protein
2.2 protein.
Length = 339
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +1
Query: 316 MRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLRE 495
MRR++ +W+++V E L I LDR + V K++ QLLG A L +ASK +
Sbjct: 84 MRRILVDWLVQVHLRFHLTPETLHLTIFVLDRIIVKNIVSKAEFQLLGVAALFVASKFED 143
Query: 496 PRSCXSPPDLLVF--YTANSITLTDLCSWELLVLSKLKWDVA 615
PD+L + T N+ + + + E +L+ L +D++
Sbjct: 144 ----IYLPDILEYELITENTFSKKQILAMEQTILNALNFDLS 181
>AF026213-1|AAB71309.1| 130|Caenorhabditis elegans Hypothetical
protein F08F1.9 protein.
Length = 130
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 316 MRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLRE 495
MR ++ +W + + + E LA+S +DR L + + K + QL+G + +A K E
Sbjct: 1 MRTILIDWFSDAVREYIFRNEAVHLAVSLVDRALPMFNINKMRFQLVGITSMRIAVKYEE 60
>AC006648-6|AAP68938.1| 123|Caenorhabditis elegans Cyclin a protein
2 protein.
Length = 123
Score = 34.7 bits (76), Expect = 0.056
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 316 MRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLRE 495
MR ++ +W + + ++E LA S +DR L + + K + QL+G + +A K E
Sbjct: 1 MRTILIDWFSDAVREYISRKEAVHLAASLVDRALPMFNIDKMRFQLVGITSMRIAVKYEE 60
>Z81077-6|CAB03069.1| 167|Caenorhabditis elegans Hypothetical
protein F36A2.7 protein.
Length = 167
Score = 28.3 bits (60), Expect = 4.8
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 431 WEKVKCNFWAQPVYCWLPNSVSQDRV 508
WE+++ N+W +P + P V+ R+
Sbjct: 122 WERIRNNYWKKPTLVFDPTGVTHQRL 147
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 484 WKPTVDRLCPKVALDFFPPRRCSRTDPGTISPVERL 377
W P V CP V + +R R+DP T+ + ++
Sbjct: 99 WTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKM 134
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 484 WKPTVDRLCPKVALDFFPPRRCSRTDPGTISPVERL 377
W P V CP V + +R R+DP T+ + ++
Sbjct: 99 WTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKM 134
>U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical
protein T12C9.7 protein.
Length = 419
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 376 EVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLRE 495
E L + LD+ L + +V K+ + L L++ASKL +
Sbjct: 179 EALHLGAALLDKCLDMMSVNKASLDELAAVTLVIASKLED 218
>AC084158-13|AAK68570.1| 337|Caenorhabditis elegans Hypothetical
protein Y69A2AR.25 protein.
Length = 337
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 437 FPTAQMLKNRSRNDIASGKTSSWQPRSSHTSSIHS 333
FPT M K+ S+ D+A+ SH SSI S
Sbjct: 288 FPTTSMKKSNSKLDVATSAPVEQTSLQSHQSSIIS 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,973,173
Number of Sequences: 27780
Number of extensions: 267317
Number of successful extensions: 742
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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