Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021870X
(483 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0) 109 1e-24
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 34 0.053
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 32 0.22
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 32 0.28
SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8) 31 0.50
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 31 0.50
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 31 0.50
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 31 0.66
SB_40594| Best HMM Match : Extensin_2 (HMM E-Value=0.083) 31 0.66
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.87
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 30 1.1
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 29 2.7
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 29 2.7
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_56636| Best HMM Match : Toxin_4 (HMM E-Value=2.4) 27 6.1
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95) 27 6.1
SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_31792| Best HMM Match : DUF1373 (HMM E-Value=2.5) 27 8.1
SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09) 27 8.1
>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
Length = 299
Score = 109 bits (262), Expect = 1e-24
Identities = 56/109 (51%), Positives = 67/109 (61%)
Frame = +3
Query: 87 VGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSPNQAESW 266
+ VF E + AG + P V P S + + + + G + AESW
Sbjct: 6 ITVFNENGESAGQTTLPAVFKAPIRPDLVNFVHSNIAKNKRQPYAVNKLAGHQTS-AESW 64
Query: 267 GTGRAVARIPRVRGGGTHRSGHGAFGNMCRGGRIFAPTKRCRRWHRRVN 413
GTGRAVARIPRVRGGGTHRSG GAFGNMCRGGR+FAPTK R+WH +VN
Sbjct: 65 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRKWHTKVN 113
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 34.3 bits (75), Expect = 0.053
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 360 HHDTCYRRHRDRTYEYHHHGHAEFGRQH 277
HH RHR R + +HHH H E+ R+H
Sbjct: 325 HHQRHRHRHRHR-HRHHHHHHHEYNRRH 351
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 32.3 bits (70), Expect = 0.22
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 234 GGWSPNQAESWGTGRAVARIPRVRGGGTHRSGHGAFGNMCRGG 362
GGW WG G+ + R GGG R G +G M GG
Sbjct: 14 GGWGQGPGGGWGRGQG-GGMGRGPGGGWGRGSGGGWGRMQGGG 55
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 234 GGWSPNQAESWGTGRAVARIPRVRGGGTHRSGHGAFGNMCRGG 362
GGW WG G R +GGG R G +G GG
Sbjct: 6 GGWGRGSGGGWGQGPG-GGWGRGQGGGMGRGPGGGWGRGSGGG 47
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 234 GGWSPNQAESWGTGRAVARIPRVRGGGTHRSGHGAFGNMCRGG 362
GGW WG G+ + R GGG R G +G M GG
Sbjct: 258 GGWGQGPGGGWGRGQG-RGMGRGPGGGWGRGSGGGWGRMQGGG 299
>SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8)
Length = 193
Score = 31.1 bits (67), Expect = 0.50
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 360 HHDTCYRRHRDRTYEYHHH 304
HH YR HR + Y +HHH
Sbjct: 96 HHHQHYRHHRHQHYRHHHH 114
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 31.1 bits (67), Expect = 0.50
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 366 YVHHDTCYRRHRDRTYEYHHHGH 298
Y HH +RR R R + +HHH H
Sbjct: 233 YHHHHHHHRRRRRRRHHHHHHHH 255
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 360 HHDTCYRRHRDRTYEYHHHGHAEFGRQHVQYP 265
HH CY HR Y Y+ H H + R H YP
Sbjct: 20 HHYCCYCHHR---YCYYRHHHYCWYRHHYHYP 48
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 366 YVHHDTCYRRHRDRTYEYHHHGH 298
Y HH CY RH + Y HH H
Sbjct: 25 YCHHRYCYYRHHHYCW-YRHHYH 46
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 30.7 bits (66), Expect = 0.66
Identities = 9/35 (25%), Positives = 14/35 (40%)
Frame = -1
Query: 372 RRYVHHDTCYRRHRDRTYEYHHHGHAEFGRQHVQY 268
R + HH + H + +HHH H H +
Sbjct: 209 RHHQHHQHHHHHHHQHNHHHHHHNHHHHHHHHYHH 243
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -1
Query: 360 HHDTCYRRHRDRTYEYHHHGH 298
HH + H + YHHH H
Sbjct: 229 HHHNHHHHHHHHYHHYHHHHH 249
>SB_40594| Best HMM Match : Extensin_2 (HMM E-Value=0.083)
Length = 440
Score = 30.7 bits (66), Expect = 0.66
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 389 PALAPSRQPPTAESGLCGTVAATGVPAL 472
P +A R PP+ G GTV+ GVP L
Sbjct: 167 PMMAMHRMPPSTLMGATGTVSTVGVPGL 194
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 30.3 bits (65), Expect = 0.87
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 369 RYVHHDTCYRRHRDRTYEYHHHGHAEFGRQHVQ 271
RY HH + +H + +HHH H H Q
Sbjct: 256 RYHHHHHHHHQHNHHQHHHHHHHHHHNHHHHHQ 288
Score = 28.7 bits (61), Expect = 2.7
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 348 CYRRHRDRTYEYHHHGHAEFGRQHVQY 268
CY + ++ + YHHH H H Q+
Sbjct: 246 CYHKLKNPRHRYHHHHHHHHQHNHHQH 272
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 246 PNQAESWGTGRAVARIPR-VRGGGTHRSGHGAFGNMCRGGR 365
P +E +G ++ R PR RGGG G G G RGGR
Sbjct: 982 PTPSEPSSSGSSIVRRPRRRRGGGGGGGGGGGGGGGRRGGR 1022
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 28.7 bits (61), Expect = 2.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 360 HHDTCYRRHRDRTYEYHHH 304
HH + RH R + YHHH
Sbjct: 570 HHHLHHHRHHHRHHHYHHH 588
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 28.7 bits (61), Expect = 2.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 360 HHDTCYRRHRDRTYEYHHHGH 298
HH + RH DR + + HH H
Sbjct: 340 HHRNKHYRHHDRNHHHRHHHH 360
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 372 RRYVHHDTCYRRHRDRTYEYHHHGHAEFGRQH 277
+ Y HHD R H R + +HH H + H
Sbjct: 344 KHYRHHD---RNHHHRHHHHHHKHHHKAANHH 372
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 140 GRGLAAPCTVSLFSEYTDTKGRATDRLI 57
G+GL C+V+L S Y T+G+ RL+
Sbjct: 3163 GKGLTTWCSVNLDSVYLSTEGKEVYRLV 3190
>SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 171 PGQ*CSRFYVQELEAALLREQG-GWSPNQAESWGTGRAVARIPRVRGGGT 317
P Q C + E+ +L G G P AE G ARI +RG GT
Sbjct: 596 PAQPCKHLHSYTFESNILGNTGTGGYPGFAERGGRASYQARIQDLRGKGT 645
>SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = -1
Query: 396 NAGSASWGRRYVHHDTCYRRHRDRTYEYHHHGHAEFGRQHVQYPMIQPGLVTSLLAHAVG 217
++ S+S Y HH +RRH YHHH H + H + +I L+ S+++ A+
Sbjct: 252 SSSSSSPLSSYYHHHH-HRRHHLN--HYHHHYHLD---DHFIFIIIITTLIVSIISVAIT 305
Query: 216 LPRVLGHR 193
+ ++ +R
Sbjct: 306 VHILIPYR 313
>SB_56636| Best HMM Match : Toxin_4 (HMM E-Value=2.4)
Length = 434
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAVARIPRVRGGG 314
R + W P ++ +W +A+ P VR GG
Sbjct: 120 RPEAAWGPKRSGAWLGSQALVPQPAVRSGG 149
>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
Length = 1656
Score = 27.5 bits (58), Expect = 6.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 342 RRHRDRTYEYHHHGHAEFGRQH 277
++HR YHHH H R H
Sbjct: 1373 KKHRHHRRHYHHHHHHHHRRHH 1394
>SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 372 RRYVHHDTCYRRHRDRTYEYHHH 304
RR+ +H R H R YHHH
Sbjct: 230 RRHFYHHHPRRYHNHRRLRYHHH 252
>SB_31792| Best HMM Match : DUF1373 (HMM E-Value=2.5)
Length = 696
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 381 SWGRRYVHHDTCYRRHRDRTYEYH-HHGHAEFGRQHVQY 268
++G+RY H RRHR R + H H G AE R Y
Sbjct: 565 NYGQRYTH-----RRHRHRHHHPHRHRGWAERDRYREAY 598
>SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09)
Length = 304
Score = 27.1 bits (57), Expect = 8.1
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 366 YVHHDTCYRRHRDRTYEYHHHGH 298
Y HH + H + +HHH H
Sbjct: 158 YYHHHLLHHHHHHWHHHHHHHRH 180
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,277,470
Number of Sequences: 59808
Number of extensions: 302379
Number of successful extensions: 1281
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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