Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021870X
         (483 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.0  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   4.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   4.0  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       21   9.1  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 360 HHDTCYRRHRDRTYEYHHHGHAEFG 286
           HH + Y  HR  +  +H HG+   G
Sbjct: 321 HHPSQYHPHRGSS-PHHQHGNHTMG 344



 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 315 YHHHGHAEFGRQHVQY 268
           +HHH H     QH+ Y
Sbjct: 351 HHHHHHQTQSLQHLHY 366


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 327 GHGAFGNMCRGGRIFAPTKR 386
           G G FG++CRG     P  R
Sbjct: 640 GGGEFGDVCRGKLKLPPDGR 659


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/23 (39%), Positives = 10/23 (43%), Gaps = 1/23 (4%)
 Frame = -1

Query: 360 HHDTCYRRHRD-RTYEYHHHGHA 295
           HH T    H       +HHH HA
Sbjct: 415 HHHTMGHGHSHIHATPHHHHSHA 437


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 297 AEFGRQHVQYPMIQPGLVTSLLAHAVGLPRVL 202
           ++FG  +VQY   +  L T  LA AV    VL
Sbjct: 284 SQFGENNVQYQGSEDILNTQSLAKAVSKNGVL 315


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 392 ALAPSRQPPTAESGLCGTVAATGVPALV 475
           A A +   P A  G    V  TG+PAL+
Sbjct: 33  AEADAEADPEAGIGAVLKVLTTGLPALI 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,636
Number of Sequences: 438
Number of extensions: 2455
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)