Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021869
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.4  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   8.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.5  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 59  NEVFDCNLFYRFGATLRKWSPKM 127
           N   DC+    FGA L+K  PK+
Sbjct: 644 NSTVDCDDVGTFGAILKKLLPKV 666


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 359 CQPGTSFQRDCNTC 400
           C+PGT F    N C
Sbjct: 504 CRPGTVFHTQSNIC 517


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -2

Query: 95  QNDKTDCNQTPHFTQSSITTLFSTREVH 12
           QN +    +   FT+ S+T+ F    +H
Sbjct: 232 QNRRMKAKKDTKFTEQSVTSTFDFLSLH 259


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 299 VAECLRQDSCDQIIFTEPVRCQPGTSFQRDCNT 397
           VA+ L+ ++ +Q +  E  +  PG   Q+ C+T
Sbjct: 755 VAQYLQIENVEQTLNHEIKKVIPGRITQKSCST 787


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -2

Query: 95  QNDKTDCNQTPHFTQSSITTLFSTREVH 12
           QN +    +   FT+ S+T+ F    +H
Sbjct: 232 QNRRMKAKKDTKFTEQSVTSTFDFLSLH 259


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -2

Query: 95  QNDKTDCNQTPHFTQSSITTLFSTREVH 12
           QN +    +   FT+ S+T+ F    +H
Sbjct: 232 QNRRMKAKKDTKFTEQSVTSTFDFLSLH 259


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 566 LQMPYPSALHLQLL 525
           +Q+P+P+A H  LL
Sbjct: 117 MQLPHPAAAHSALL 130


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 506 IPERILCPGSAQTSWELTIFYRHPRSIGPDRYLSRRKC 393
           +P   L   SAQT  EL + +    S+     L+R KC
Sbjct: 358 LPLTSLSLASAQTLSELDLSWNSISSLSHGGQLARFKC 395


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,507
Number of Sequences: 336
Number of extensions: 3850
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)