Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021867X
         (547 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7P0Y4 Cluster: Chromosome chr19 scaffold_4, whole geno...    35   1.4  
UniRef50_O21262 Cluster: ATP synthase F0 subunit 8; n=1; Reclino...    33   4.3  
UniRef50_Q8IBG8 Cluster: Putative uncharacterized protein PF07_0...    32   7.5  
UniRef50_A0DN78 Cluster: Chromosome undetermined scaffold_57, wh...    32   9.9  

>UniRef50_A7P0Y4 Cluster: Chromosome chr19 scaffold_4, whole genome
           shotgun sequence; n=8; Magnoliophyta|Rep: Chromosome
           chr19 scaffold_4, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 1036

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 18/63 (28%), Positives = 36/63 (57%)
 Frame = -1

Query: 496 HGQRELQTATISIPNTNISDSPLRMRNVDVRFA*AYRQAILSNGTTVILQILSMNVSNMT 317
           +GQR ++  T+S+P T++  +  R  ++D +FA   +QA     +T + Q+    V+N+ 
Sbjct: 811 YGQRRIRVTTLSLPCTSMLSNLFRSADLDTQFACFLKQAASEIPSTPLSQVRE-QVTNLC 869

Query: 316 LKI 308
           + I
Sbjct: 870 INI 872


>UniRef50_O21262 Cluster: ATP synthase F0 subunit 8; n=1;
           Reclinomonas americana|Rep: ATP synthase F0 subunit 8 -
           Reclinomonas americana
          Length = 133

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +3

Query: 276 LSFYETLFFALILSVIFETFILKICKITVVPLLKIAWRYA*ANLTSTLRMRKGESDIL 449
           ++F+   F+ LI  + F  F+LKI   TVV + K+  +   A  +   +++K +S IL
Sbjct: 7   VTFFSQYFWLLIFFLTFYFFVLKIVLPTVVTIFKLRKKKLEAMASEVEQLKKEQSSIL 64


>UniRef50_Q8IBG8 Cluster: Putative uncharacterized protein PF07_0120;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PF07_0120 - Plasmodium falciparum
            (isolate 3D7)
          Length = 2569

 Score = 32.3 bits (70), Expect = 7.5
 Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
 Frame = -2

Query: 267  KYMFEVV**LIIQDLHESGHSFQGKKPHVWKKKQIKNLKNSEKITSALTGAN*AYMCLLN 88
            KY +E +   +I+ + +S H ++     +     +KNLKN+ K TS +T  N  Y  + N
Sbjct: 2119 KYFYEPI---LIEAMDKSDHEYESYVEILRYNDNLKNLKNNPKSTSFITNGN-EYRYINN 2174

Query: 87   IMICVLFFEFIDLVK-IENKHYDLF 16
             +     +  +D+ + I N+H +++
Sbjct: 2175 KL-----YTLVDVTREIANRHPNIY 2194


>UniRef50_A0DN78 Cluster: Chromosome undetermined scaffold_57, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_57, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1729

 Score = 31.9 bits (69), Expect = 9.9
 Identities = 20/58 (34%), Positives = 32/58 (55%)
 Frame = -1

Query: 478  QTATISIPNTNISDSPLRMRNVDVRFA*AYRQAILSNGTTVILQILSMNVSNMTLKIS 305
            Q  TIS    N+SD+PL  + + +RF   +   I  N + ++  I  +N+SN  L+IS
Sbjct: 928  QYNTISFEELNLSDNPLGEKEL-IRF---FTPQIFKNRSKLVAIIKQLNLSNCKLQIS 981


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,503,978
Number of Sequences: 1657284
Number of extensions: 8379768
Number of successful extensions: 16895
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16893
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)