Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021867X
         (547 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0428 - 3127098-3129254                                           31   0.45 
11_04_0318 + 16336356-16336358,16337254-16337484,16337580-163376...    31   0.79 
12_02_0117 - 13860418-13860524,13860612-13860810,13860969-138611...    28   5.6  
05_06_0136 + 25928152-25928659,25928767-25928899,25928987-259290...    27   7.4  

>02_01_0428 - 3127098-3129254
          Length = 718

 Score = 31.5 bits (68), Expect = 0.45
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -2

Query: 234 IQDLHESGHSFQGKKPHVWKKKQIKNLKNSEKITSALTGAN*AYMCLLNIMICV 73
           +Q L   G S  GK P VW  K +KNL+      + LTG    ++  LN +IC+
Sbjct: 440 LQHLEIYGSSLSGKMP-VWLSK-LKNLEKLFLYDNRLTGTVPVWINKLNFLICL 491


>11_04_0318 +
           16336356-16336358,16337254-16337484,16337580-16337654,
           16337741-16337839,16339010-16339121,16339586-16339713,
           16340022-16340141,16340967-16341047,16341460-16341537,
           16341616-16341708,16341880-16341934,16342795-16342871,
           16343008-16343079,16343159-16343242,16343620-16343739,
           16343824-16343892,16344721-16344798,16345684-16345822,
           16345990-16346154,16346239-16346384,16346501-16346680,
           16346834-16346922,16346997-16347028,16347120-16347226
          Length = 810

 Score = 30.7 bits (66), Expect = 0.79
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = -1

Query: 496 HGQRELQTATISIPNTNISDSPLRMRNVDVRFA*AYRQAILSNGTTVILQILSMNVSNMT 317
           +GQR ++   +S+P TN+  +  R  +++ +F    +QA     T+ +L  L   V+N  
Sbjct: 534 YGQRRIRVMNLSLPCTNMLSNLFRYADLETQFTCFLKQAANGIPTSTLLH-LREEVTNTC 592

Query: 316 LKI 308
           + I
Sbjct: 593 INI 595


>12_02_0117 -
           13860418-13860524,13860612-13860810,13860969-13861148,
           13861230-13861375,13862185-13862323,13863076-13863153,
           13863654-13863722,13863806-13863925,13864792-13864875,
           13864961-13865032,13865204-13865345,13866016-13866023
          Length = 447

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/43 (23%), Positives = 25/43 (58%)
 Frame = -1

Query: 496 HGQRELQTATISIPNTNISDSPLRMRNVDVRFA*AYRQAILSN 368
           +GQR ++   +S+  TN+  +  R  +++ +F    +QA++ +
Sbjct: 200 YGQRRIRVINLSLSCTNVLSNLFRYADLETQFTYVVKQALIKS 242


>05_06_0136 +
           25928152-25928659,25928767-25928899,25928987-25929058,
           25929150-25929221,25929507-25929670,25929760-25930025,
           25930115-25930241,25930599-25930667,25930765-25930957,
           25931053-25931299,25931342-25931470,25932367-25932654
          Length = 755

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -2

Query: 528 RNWIVPVSRDVMASVNFKPPLYLYRILIYRTHPY 427
           R + + ++ ++M S  +KP +YLY   IY T+P+
Sbjct: 95  REFYINLNGNMMYSKGYKP-VYLYAHAIYNTNPF 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,327,438
Number of Sequences: 37544
Number of extensions: 211899
Number of successful extensions: 375
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)