Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021866X
(524 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0601 - 5268520-5271112,5272448-5272950 34 0.061
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 33 0.11
02_02_0490 - 10879761-10879861,10879946-10880185,10880274-108803... 31 0.57
08_02_0490 - 17724878-17725045,17725264-17725342,17725434-177254... 30 0.99
02_02_0492 - 10907529-10907629,10907714-10907953,10908035-109080... 30 0.99
11_06_0195 - 21138029-21138389,21139796-21140052 29 1.7
07_03_1234 + 25064187-25064900 29 1.7
02_05_0024 + 25152090-25153151,25153232-25154145,25154499-251547... 29 1.7
03_06_0212 + 32400982-32402055 29 2.3
01_01_0052 - 391398-391691,392243-392647 29 2.3
09_04_0588 - 18789971-18790000,18790334-18790507,18791470-187919... 28 4.0
05_06_0055 + 25235844-25235872,25237026-25237932 28 4.0
05_01_0177 + 1231679-1231753,1232259-1232546,1232608-1232685,123... 28 4.0
03_01_0478 - 3665246-3665356,3665627-3665728,3665770-3665964,366... 28 4.0
10_08_0933 + 21661209-21662813 28 5.3
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 28 5.3
09_04_0465 + 17827224-17827997,17828711-17829024,17829949-178303... 28 5.3
09_04_0437 - 17587944-17588909 28 5.3
01_07_0122 - 41196081-41196205,41197561-41198245,41198961-411993... 28 5.3
01_05_0507 - 22800124-22800163,22800411-22800554,22801291-228018... 28 5.3
01_05_0421 + 21990034-21990392,21991691-21992681 28 5.3
12_02_0675 + 21814048-21814368 27 7.0
11_08_0033 + 27820563-27823482,27823593-27823996 27 7.0
11_01_0600 - 4780579-4780839,4781256-4781324,4781535-4781598,478... 27 7.0
07_03_1182 - 24610862-24611637,24612223-24612340,24612441-246141... 27 7.0
04_04_0528 + 25986862-25987938,25988025-25988965,25989071-25989140 27 7.0
03_05_0252 - 22403504-22404676 27 7.0
02_01_0135 + 967172-967229,968316-968657,968936-969015,969063-96... 27 7.0
03_05_0509 - 25032494-25033156 24 8.5
12_02_1092 - 26011445-26012071,26012826-26014022,26014083-260142... 27 9.2
12_01_0671 - 5702051-5702159,5702493-5703216,5703910-5704476,570... 27 9.2
04_04_0946 - 29579779-29580004,29580098-29580210 27 9.2
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 27 9.2
>08_01_0601 - 5268520-5271112,5272448-5272950
Length = 1031
Score = 34.3 bits (75), Expect = 0.061
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 164 TPGPLSGHHHRHHNY 120
TP PL GHHH HH+Y
Sbjct: 868 TPPPLQGHHHHHHHY 882
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -1
Query: 185 PCGLANETPGPLSGHHHRHHNYFPRPPYRFAVAKCAG 75
P G P PL HH HH + P PP+ AG
Sbjct: 279 PAGPPPPAPPPLPPSHHHHHGHHPPPPHPLPPGAGAG 315
>02_02_0490 -
10879761-10879861,10879946-10880185,10880274-10880337,
10880426-10880731,10881098-10881312,10881417-10881711,
10882193-10882357,10882477-10882527,10882657-10883109,
10883195-10883281,10883736-10884800,10884858-10885376
Length = 1186
Score = 31.1 bits (67), Expect = 0.57
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -3
Query: 444 RIRVNAKVVSRACVVGIRPLVGAGTREGNILVASLVHHDTAHLALESLFSKAPYEIFAVG 265
R+ + + R V P + +GT E NIL + +H + LE+ K EI +G
Sbjct: 417 RLSGDVQTCGRIAYVSQSPWIQSGTIEHNILFGTKLHRERYEKVLEACCLKKDLEILPLG 476
Query: 264 TKRRCLKNLGMNL 226
+ + G+NL
Sbjct: 477 -DQTIIGERGINL 488
>08_02_0490 -
17724878-17725045,17725264-17725342,17725434-17725498,
17725569-17725657,17725750-17725858,17725969-17726047,
17727247-17727512
Length = 284
Score = 30.3 bits (65), Expect = 0.99
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = -3
Query: 366 EGNILVASLVHHDTAHLAL----ESLFSKAPYEIFAVGTKRRCLKNL 238
+G ILV +HHD L L + + + YE+F KRR LK+L
Sbjct: 167 KGRILVGHALHHDLKVLLLGHPKKDIRDTSEYEVFRREGKRRSLKDL 213
>02_02_0492 -
10907529-10907629,10907714-10907953,10908035-10908098,
10908416-10908721,10909347-10909561,10909656-10909950,
10910493-10910597,10911112-10911180,10911433-10911519,
10911953-10913704,10914964-10915054,10915217-10915488
Length = 1198
Score = 30.3 bits (65), Expect = 0.99
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -3
Query: 444 RIRVNAKVVSRACVVGIRPLVGAGTREGNILVASLVHHDTAHLALESLFSKAPYEIFAVG 265
R+ + + R V P + +GT E NIL + +H + LE+ K EI +G
Sbjct: 594 RLSGDVQTCGRIAYVSQSPWIQSGTIEHNILFDTKLHRERYEKVLEACCLKKDMEILPLG 653
Query: 264 TKRRCLKNLGMNL 226
+ + G+NL
Sbjct: 654 -DQTIIGERGINL 665
>11_06_0195 - 21138029-21138389,21139796-21140052
Length = 205
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 143 HHHRHHNYFPRPPYRFAVA 87
HHH H+NYF + +R AVA
Sbjct: 29 HHHGHYNYFHQQHHRQAVA 47
>07_03_1234 + 25064187-25064900
Length = 237
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 259 FCSHCKDFIWGFGKQGFQCQVCSVVVHKRCHEY 357
FC C+ + G G++C C + +H C +Y
Sbjct: 28 FCDICRTNVAGM--VGYRCNTCDIDIHDACADY 58
>02_05_0024 +
25152090-25153151,25153232-25154145,25154499-25154709,
25154757-25154921
Length = 783
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 4/22 (18%)
Frame = -1
Query: 161 PGPLS-GHHHRHHN---YFPRP 108
P PL+ GHHH HHN +FP P
Sbjct: 416 PNPLAHGHHHYHHNHPSFFPFP 437
>03_06_0212 + 32400982-32402055
Length = 357
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 176 LANETPGPLSGHHHRHH 126
L + +P +SGHHH HH
Sbjct: 286 LQSNSPSNMSGHHHHHH 302
>01_01_0052 - 391398-391691,392243-392647
Length = 232
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 161 PGPLSGHHHRHHNY 120
P PL HHH+HHN+
Sbjct: 195 PHPLHHHHHQHHNH 208
>09_04_0588 -
18789971-18790000,18790334-18790507,18791470-18791954,
18792912-18793266
Length = 347
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 262 CSHCKDFIWGFGKQGFQCQVCSVVVHKRC 348
C CK++ G GK+ F CQ+C +H+ C
Sbjct: 68 CMGCKEY--GAGKR-FMCQLCGFQLHEFC 93
>05_06_0055 + 25235844-25235872,25237026-25237932
Length = 311
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 197 SLGHPCGLANET--PGPLSGHHHRHHN 123
SL + GL N P L+ HHH HH+
Sbjct: 188 SLSNSLGLLNAATMPATLAAHHHHHHH 214
>05_01_0177 +
1231679-1231753,1232259-1232546,1232608-1232685,
1233458-1233673,1233862-1233981,1234079-1234804
Length = 500
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 248 KQRRFVPTAKISYGALENKDSSAKCAVSWCTSDATSMLPSRVPAPTRGRIPTTHARD 418
+Q P+AK+S + K ++ K +S DA S+ + P R I T+ RD
Sbjct: 349 RQSPSTPSAKVSPIFAKKKSATPKNGLSQVDDDAKSVFSVQSERPRRHSIATSTVRD 405
>03_01_0478 -
3665246-3665356,3665627-3665728,3665770-3665964,
3666067-3666216,3666437-3666523,3666626-3666865
Length = 294
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 365 KVTYSWHRLCTTTLHTWHWNPCFPK-PHM 282
K+ S RLC L W+ P FPK PH+
Sbjct: 231 KLERSSTRLCPLILSDWYMGPTFPKGPHV 259
>10_08_0933 + 21661209-21662813
Length = 534
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = +2
Query: 257 RFVPTAKISYGALENKDSSAKCAVSWCTSDATSMLPSRVPAPTRGRIPTTHARDTTFAFT 436
R+ + +Y A + SS+ A S + T +LP R PTR T+ +A
Sbjct: 165 RYGDFVQAAYTAFHSMPSSSSAAASQHSQHRTLVLPDRSYRPTRSLFATSSLSIPAWARR 224
Query: 437 RI----LLQRSAIT--VALC 478
R L QRS+ VA+C
Sbjct: 225 RSAPGWLTQRSSFVGYVAVC 244
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -1
Query: 191 GHPCGLANETPGPLSGHHHRHHNY 120
G P A P GHHH HH +
Sbjct: 137 GQPAAAAAAHPVAALGHHHHHHQW 160
>09_04_0465 +
17827224-17827997,17828711-17829024,17829949-17830397,
17830641-17830756
Length = 550
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = -1
Query: 221 LSPGKHSSSLGHPCGLANETPGP---LSGHHHRHHNYFPRP 108
L P H H ++ P LS HHH HH P P
Sbjct: 15 LLPSPHQLRRRHIAAVSLSLPHTSLSLSSHHHHHHRLAPTP 55
>09_04_0437 - 17587944-17588909
Length = 321
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 161 PGPLSGHHHRHHNYFPRPPYR-FAVAKCA 78
PG + HHH HH +PP R +A CA
Sbjct: 45 PGGGAHHHHHHHLLQQQPPRRPGPIAVCA 73
>01_07_0122 -
41196081-41196205,41197561-41198245,41198961-41199329,
41199405-41199514,41200539-41200833
Length = 527
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -1
Query: 203 SSSLGHPC--GLANETPGPLSGHHHRHHNY 120
SS L H G +E P P HHH HH++
Sbjct: 327 SSYLRHSLHSGGGSEAPSPAPMHHHGHHHH 356
>01_05_0507 -
22800124-22800163,22800411-22800554,22801291-22801850,
22803207-22803264,22803885-22804124,22804191-22804315
Length = 388
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 158 GPLSGHHHRHHNYFPRPPYR 99
G S HHR H +FP P YR
Sbjct: 298 GHWSVRHHRWHLHFPSPDYR 317
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 227 CDLSPGKHSSSLGH-PCGLANETPGPLSGHHHRHHNYFPRPP 105
CD + + ++G P +A PG HHH HH PP
Sbjct: 131 CDALTEESAKAIGGIPAAMA--APGHHHHHHHHHHQLLFSPP 170
>12_02_0675 + 21814048-21814368
Length = 106
Score = 27.5 bits (58), Expect = 7.0
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -1
Query: 227 CDLSPGKHSSSLGHPCGLANETPGPLSGHHHRHHNY-FPRPPYRF-AVAKCAGKL 69
CDL+P S G P G TPG + H R Y PR P + AKC G L
Sbjct: 17 CDLAPFTPVGSRGPPPGGLPPTPGGV--HLRRKGPYRRPRKPTEVRSQAKCPGDL 69
>11_08_0033 + 27820563-27823482,27823593-27823996
Length = 1107
Score = 27.5 bits (58), Expect = 7.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 278 ISYGALENKDSSAKCAVSWCTSD 346
I G L+N D+S C+ +W D
Sbjct: 1041 IQQGVLQNNDTSLPCSATWANED 1063
>11_01_0600 -
4780579-4780839,4781256-4781324,4781535-4781598,
4781791-4781919,4782234-4782541
Length = 276
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 99 IRGREMRRETRKYYYLTGNYSQDC--EAHTDRPPS 1
+R R RRE R+ +L +S DC E RPPS
Sbjct: 52 LRRRARRRERRRRTWLPAMWSPDCRLELQHRRPPS 86
>07_03_1182 -
24610862-24611637,24612223-24612340,24612441-24614120,
24614253-24614320,24615370-24615550
Length = 940
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 324 QCRGAQAMPRVCYLHVSRRRQGGG 395
QCR A+ PR L+ R+GGG
Sbjct: 401 QCRDAEVRPRTASLYAYIERRGGG 424
>04_04_0528 + 25986862-25987938,25988025-25988965,25989071-25989140
Length = 695
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 161 PGPLSGHHHRHHNYFPRPPYRFAVAKCAG 75
P P++ H H HH+ FP P+ + A+ AG
Sbjct: 422 PNPMA-HDHHHHHGFPFLPFPDSSAQPAG 449
>03_05_0252 - 22403504-22404676
Length = 390
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -1
Query: 323 HTWHWNPCFPKPH--MKSLQWEQNVA 252
H W P FP+PH ++S W + VA
Sbjct: 184 HVPEWLPAFPEPHTYVRSELWSEEVA 209
>02_01_0135 +
967172-967229,968316-968657,968936-969015,969063-969698,
969819-971527,971563-972514,972821-973273,974303-974497
Length = 1474
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 456 ERWRRIRVNAKVVSRACVVGIRPLVGAGTREGNILVASLVHHD 328
ER I + KV ++C +G+ PLVG G G +A V+HD
Sbjct: 245 ERDNIIELLTKV--KSCDLGVLPLVGVG-GVGKTTLARFVYHD 284
>03_05_0509 - 25032494-25033156
Length = 220
Score = 23.8 bits (49), Expect(2) = 8.5
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -1
Query: 146 GHHHRHHNY 120
GHHH HH++
Sbjct: 15 GHHHHHHHH 23
Score = 21.8 bits (44), Expect(2) = 8.5
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -1
Query: 143 HHHRHHNYFPRPPYRFAVA 87
HH RH + PP AVA
Sbjct: 22 HHRRHRSETSCPPTSVAVA 40
>12_02_1092 -
26011445-26012071,26012826-26014022,26014083-26014286,
26014316-26014385,26014440-26014479,26015566-26015632,
26015718-26015740,26017985-26018081,26018553-26018614,
26018913-26019297,26019924-26020007,26020383-26020467,
26020579-26020790,26020881-26021030
Length = 1100
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 280 FIWGFGKQGFQCQVCSVVVHKRCHEYVTFTCP 375
F+WGFG+ + S +V+ C Y T P
Sbjct: 378 FLWGFGRIEMEANAFSHLVNLDCMRYCTTGLP 409
>12_01_0671 - 5702051-5702159,5702493-5703216,5703910-5704476,
5704654-5704873,5705303-5707207
Length = 1174
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 408 THETQLSRLHVFFSNVLRSLWLSAVRAHPPG 500
T T +S++ + L S WL A H PG
Sbjct: 1021 TKATHMSKISMIDEQRLESAWLQAAEKHTPG 1051
>04_04_0946 - 29579779-29580004,29580098-29580210
Length = 112
Score = 27.1 bits (57), Expect = 9.2
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 143 HHHRHHNYFPRP 108
HHHRHH+ P+P
Sbjct: 82 HHHRHHHQQPQP 93
>04_01_0617 -
8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 295 GKQGFQCQVCSVVVHKRCHEYV 360
G++ C C+V VH RC YV
Sbjct: 260 GEEMVSCDECNVWVHTRCARYV 281
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,571,808
Number of Sequences: 37544
Number of extensions: 385697
Number of successful extensions: 1639
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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