Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021866X
(524 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36) 97 8e-21
SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) 59 3e-09
SB_25040| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 8e-09
SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_28412| Best HMM Match : C1_1 (HMM E-Value=5.5e-17) 48 6e-06
SB_15740| Best HMM Match : SH2 (HMM E-Value=8.1e-18) 42 4e-04
SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13) 42 4e-04
SB_22391| Best HMM Match : C1_1 (HMM E-Value=3.6e-17) 41 7e-04
SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18) 38 0.004
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0) 37 0.009
SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0) 36 0.027
SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021) 32 0.034
SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_13956| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_16746| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_37867| Best HMM Match : PH (HMM E-Value=0.0027) 30 1.0
SB_39986| Best HMM Match : CNH (HMM E-Value=6.99949e-42) 30 1.0
SB_18526| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.0
SB_48522| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 29 1.8
SB_29350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_4879| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 24 3.8
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 4.1
SB_56263| Best HMM Match : G-alpha (HMM E-Value=3.6) 28 4.1
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 4.1
SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 4.1
SB_19065| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.4
SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_54075| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_51299| Best HMM Match : Keratin_B2 (HMM E-Value=8) 27 7.2
SB_3590| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_38097| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 27 7.2
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 27 7.2
SB_56821| Best HMM Match : His_leader (HMM E-Value=0.41) 27 9.5
SB_51083| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_44119| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_43963| Best HMM Match : Ammonium_transp (HMM E-Value=0) 27 9.5
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 27 9.5
SB_10554| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 9.5
SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_2643| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_59088| Best HMM Match : AlaDh_PNT_N (HMM E-Value=4.3e-07) 27 9.5
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 27 9.5
SB_19105| Best HMM Match : 7tm_1 (HMM E-Value=5e-08) 27 9.5
SB_16820| Best HMM Match : BRF1 (HMM E-Value=0.2) 27 9.5
>SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36)
Length = 454
Score = 97.1 bits (231), Expect = 8e-21
Identities = 40/62 (64%), Positives = 48/62 (77%)
Frame = +1
Query: 322 CSVVVHKRCHEYVTFTCPGADKGADSDDTRTRHNFRVYTYSSPTFCDHCGSLLYGLIHQG 501
CS VVHKRCHE+VTF CPGA++ + + + HNF +TY SP FCDHCGSLLYG+ HQG
Sbjct: 2 CSFVVHKRCHEFVTFKCPGAEE-IEKNPVSSPHNFGPHTYKSPCFCDHCGSLLYGVYHQG 60
Query: 502 LK 507
LK
Sbjct: 61 LK 62
Score = 48.0 bits (109), Expect = 5e-06
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +1
Query: 187 CPKEEECLPGERSQIH---AEILQAATFCSHCKDFIWGFGKQGFQCQVCSVVVHKRCHEY 357
CP EE S H ++ FC HC ++G QG +C C + VHK+C +
Sbjct: 18 CPGAEEIEKNPVSSPHNFGPHTYKSPCFCDHCGSLLYGVYHQGLKCTACDMNVHKKCEKA 77
Query: 358 VTFTCPGADKGADSDDTRTRHNFRV 432
V C GAD + R R + ++
Sbjct: 78 VPKLC-----GADHTERRGRIHLKI 97
>SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 72.1 bits (169), Expect = 3e-13
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 235 AEILQAATFCSHCKDFIWG-FGKQGFQCQVCSVVVHKRCHEYVTFTC 372
A L+ TFCSHC DFIWG GKQG+QCQVC + VH+RCH+ V C
Sbjct: 137 ATYLRQPTFCSHCNDFIWGVIGKQGYQCQVCKMNVHRRCHQNVANNC 183
Score = 30.7 bits (66), Expect = 0.77
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 418 HNFRVYTYSSPTFCDHCGSLLYGLI 492
H F PTFC HC ++G+I
Sbjct: 133 HKFMATYLRQPTFCSHCNDFIWGVI 157
>SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)
Length = 1440
Score = 58.8 bits (136), Expect = 3e-09
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 250 AATFCSHCKDFIWGFGKQGFQCQVCSVVVHK-RCHEYVTFTCPGADK 387
+ TFC+HC + +WG G QG+QC +C VHK C E + CPG K
Sbjct: 249 STTFCNHCSNLLWGIGDQGYQCSICEFNVHKVGCLESIEEMCPGPKK 295
Score = 36.3 bits (80), Expect = 0.015
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 418 HNFRVYTYSSPTFCDHCGSLLYGLIHQG 501
H+F Y+S TFC+HC +LL+G+ QG
Sbjct: 240 HHFVSTHYTSTTFCNHCSNLLWGIGDQG 267
>SB_25040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 456
Score = 57.2 bits (132), Expect = 8e-09
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +1
Query: 418 HNFRVYTYSSPTFCDHCGSLLYGLIHQGLK 507
H F+V Y SPTFCDHCGSLLYGL QGLK
Sbjct: 149 HKFKVNNYLSPTFCDHCGSLLYGLFRQGLK 178
Score = 48.8 bits (111), Expect = 3e-06
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 256 TFCSHCKDFIWGFGKQGFQCQVCSVVVHKRCHEYVTFTC 372
TFC HC ++G +QG +C+ C++ H +CH++V C
Sbjct: 160 TFCDHCGSLLYGLFRQGLKCEACNMNCHHKCHKHVPNLC 198
>SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +1
Query: 400 DDTRTR-HNFRVYTYSSPTFCDHCGSLLYGLIHQGLK 507
D+T R H V++Y SPTFCD CG +LYGL+ QGLK
Sbjct: 94 DETIARSHQLAVHSYKSPTFCDFCGQMLYGLVRQGLK 130
Score = 40.7 bits (91), Expect = 7e-04
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 190 PKEEECLPGERSQIHAEILQAATFCSHCKDFIWGFGKQGFQCQVCSVVVHKRCHEYVTFT 369
P++E + +H+ ++ TFC C ++G +QG +C C HKRC +
Sbjct: 92 PEDETIARSHQLAVHS--YKSPTFCDFCGQMLYGLVRQGLKCDGCGGNFHKRCAYRIRNN 149
Query: 370 C 372
C
Sbjct: 150 C 150
>SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 418 HNFRVYTYSSPTFCDHCGSLLYGLIHQGLK 507
HNF+ TY SPT+CDHCG LL G+I QG +
Sbjct: 350 HNFQETTYFSPTYCDHCGGLLRGIIKQGCR 379
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 256 TFCSHCKDFIWGFGKQGFQCQVCSVVVHKRCHEYVTFTC 372
T+C HC + G KQG +C+ C + HK C + + C
Sbjct: 361 TYCDHCGGLLRGIIKQGCRCRDCHINCHKSCKKELVIEC 399
>SB_28412| Best HMM Match : C1_1 (HMM E-Value=5.5e-17)
Length = 490
Score = 47.6 bits (108), Expect = 6e-06
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 244 LQAATFCSHCKDFIWGFGKQGFQCQVCSVVVHKRCHEYVTFTCPGA 381
L+ T+C C +FIWG KQ +C+ C H+RC V C GA
Sbjct: 215 LRNPTWCDLCGEFIWGLYKQAIRCKHCKYTCHRRCRIDVDLDCLGA 260
Score = 38.7 bits (86), Expect = 0.003
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 418 HNFRVYTYSSPTFCDHCGSLLYGLIHQGLKFKH 516
H+F ++ +PT+CD CG ++GL Q ++ KH
Sbjct: 208 HSFLPFSLRNPTWCDLCGEFIWGLYKQAIRCKH 240
>SB_15740| Best HMM Match : SH2 (HMM E-Value=8.1e-18)
Length = 453
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Frame = +1
Query: 259 FCSHCKDFIWGFGKQGFQCQVCSVVVHKRCHEYVTFTC---PGADK---------GADSD 402
+C C F+WG QG +C C + +H++CH+ + C P DK G+ D
Sbjct: 181 WCDICGKFMWGLKGQGLKCATCGMNIHQKCHKDDSRPCVPPPPKDKNKPRKKSSVGSPRD 240
Query: 403 DTRTRHNFRVYTYSSPTFCDH 465
T + FR Y + C H
Sbjct: 241 STISVETFRTQCYYQES-CVH 260
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 418 HNFRVYTYSSPTFCDHCGSLLYGLIHQGLK 507
H+F+ + Y P +CD CG ++GL QGLK
Sbjct: 169 HDFKTHDYKQPKWCDICGKFMWGLKGQGLK 198
>SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13)
Length = 752
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 235 AEILQAATFCSHC-KDFIWGFGKQGFQCQVCSVVVHKRCHEYVTFTC 372
A+ L T C+ C K I GKQ ++C+ C + HKRCH T C
Sbjct: 696 ADHLGETTECAVCAKSIIRKPGKQAYRCKDCKMTCHKRCHSQTTVIC 742
>SB_22391| Best HMM Match : C1_1 (HMM E-Value=3.6e-17)
Length = 103
Score = 40.7 bits (91), Expect = 7e-04
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 259 FCSHCKDFIWGFGKQGFQCQVCSVVVHKRCHEYVTFTCPGA 381
FC +C + GF KQG +C+ C + VH +C E V C G+
Sbjct: 60 FCYYCNKLLKGFIKQGVKCKNCKMGVHHKCQENVP-ACRGS 99
Score = 36.3 bits (80), Expect = 0.015
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 415 RHNFRVYTYSSPTFCDHCGSLLYGLIHQGLKFKH 516
+H F + + P FC +C LL G I QG+K K+
Sbjct: 47 KHEFVEHNFRKPQFCYYCNKLLKGFIKQGVKCKN 80
>SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18)
Length = 865
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 385 KGADSDDTRTRHNFRVYTYSSPTFCDHCGSLLY----GLIHQGL 504
K ++ H F V +S PTFC+HC SL++ G++ QGL
Sbjct: 626 KKGKNEVVHNHHKFSVTQFSIPTFCEHCNSLIWVLEKGMVCQGL 669
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 256 TFCSHCKDFIWGFGKQGFQCQ 318
TFC HC IW K G CQ
Sbjct: 648 TFCEHCNSLIWVLEK-GMVCQ 667
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 418 HNFRVYTYSSPTFCDHCGSLLYGLIHQG 501
H F V T+++PT C+ C SL+ GL+ QG
Sbjct: 925 HKFSVRTFTTPTKCNQCTSLMIGLVRQG 952
>SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 928
Score = 37.1 bits (82), Expect = 0.009
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Frame = +1
Query: 295 GKQGFQCQVC--------SVVVHKRCHEYVT-FTCPGADKGADSDDTRTRHNFRVYTYSS 447
G++ ++CQVC ++ H+R H+ + + C DK S + RTRH R +T
Sbjct: 784 GEKPYKCQVCERGFACTSALKSHQRRHDGIKPYKCERCDKRFTSSNERTRH-MRTHTGDK 842
Query: 448 PTFCDHC 468
P CD C
Sbjct: 843 PYTCDIC 849
>SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1250
Score = 35.5 bits (78), Expect = 0.027
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +1
Query: 244 LQAATFCSHCKDFIWGFGKQGFQCQVCSVVVHKRCHEYVTFTCPGADKGADSDDTRTRHN 423
L+A + C C +++ G +C+ C + HKRC +T C + KGA +++ T +N
Sbjct: 182 LRAPSRCRDCDSYVYF---NGAECEQCGLTCHKRCLARLTNKC--SYKGAGTENQLTDYN 236
>SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021)
Length = 358
Score = 32.3 bits (70), Expect(2) = 0.034
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 143 HHHRHHNYFPRPPYR 99
HHH HH++F +PPY+
Sbjct: 141 HHHHHHHHFVQPPYQ 155
Score = 21.8 bits (44), Expect(2) = 0.034
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -1
Query: 155 PLSGHHHRHHNY 120
P H H HH+Y
Sbjct: 128 PTGNHRHYHHHY 139
>SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 325 SVVVHKRCHE-YVTFTCPGADKGADSDDTRTRHNFRVYTYSSPTFCDHCG 471
S+V H R H + C + R +H FR++T P CDHCG
Sbjct: 111 SLVEHLRVHSGEKPYKCDICGRKFSLSSNRDKH-FRLHTNEKPFRCDHCG 159
>SB_13956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 238 EILQAATF-CSHCK--DFIWGFGKQGFQCQVCSVVVHKRCHEYVTFTCPGAD 384
E+ QA F C CK D I+ F QC C V+HK YV + P D
Sbjct: 74 ELCQAKGFVCEVCKSNDVIFAFDPHAVQCSKCKAVLHK---WYVVMSMPYVD 122
>SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +1
Query: 349 HEYVTFTCPGADKGADSDDTRTRHNFRVYTYSSPTFCDHCGSLLY 483
H + F C K DS + H ++ +P C HCG LY
Sbjct: 282 HTHDQFECEQCQKFFDSYNQLHNHQKTIHGGKNPFKCGHCGKCLY 326
>SB_16746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 301 VFQSPI*NLCSGNKTSL-LEESRHEFVIFHQVNI 203
VF SP+ NL GN+ S+ + +H+F H VN+
Sbjct: 431 VFMSPVTNLSCGNRRSIDFVQQKHDFFCRHFVNV 464
>SB_37867| Best HMM Match : PH (HMM E-Value=0.0027)
Length = 369
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 418 HNFRVYTYSSPTFCDHCGSLLYGLIHQG 501
HNF + + +P+ CD+C L+ G + +G
Sbjct: 171 HNFVKHMFLTPSNCDYCLQLIIGFVSKG 198
>SB_39986| Best HMM Match : CNH (HMM E-Value=6.99949e-42)
Length = 952
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 262 CSHCKDFIWGFGKQGFQCQVCSVVVHKRCHEYVTFTC 372
C+ C D + FG+Q +C C V H +C + TC
Sbjct: 350 CAVCLDSVH-FGRQSSKCAECDSVCHIKCCPNLPHTC 385
>SB_18526| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 322
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Frame = +1
Query: 262 CSHC-KDFIWGFGKQGFQCQVC--------SVVVHKRCH-EYVTFTCPGADKGADSDDTR 411
C C K I G++ +QC C ++ H H E + C KG
Sbjct: 108 CDECGKHLIIHSGRKPYQCDECGKCYIKFGALKRHLSIHTEQKPYKCDKCGKGFSESGAL 167
Query: 412 TRHNFRVYTYSSPTFCDHCGSLLYGLIH 495
RH +++ P CD CG L H
Sbjct: 168 KRHVI-IHSRRKPYKCDECGKCFTQLTH 194
>SB_48522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -3
Query: 366 EGNILVASLVHHDTAHLALESLFSKAPYEIFAVGTKRRCLKNLGM 232
E N V LV H T H ++L S++ Y AV +RR +N G+
Sbjct: 2 ENNKTVRHLVRHITGHAKNDALSSESYYNSLAVVLQRRDWENPGV 46
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 343 RCHEYVTFTCPGADKGADSDDTRTRHNFRVYTYSSPTFC 459
R H + T G D+ TRT HN TY T C
Sbjct: 520 RIHHDIVTTTTRIHHGIDTTTTRTHHNMDTTTYEYITVC 558
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 343 RCHEYVTFTCPGADKGADSDDTRTRHNFRVYTYSSPTFC 459
R H + T G D+ TRT H TY T C
Sbjct: 51 RIHHDIVTTTTRIHHGIDTTTTRTHHGMDTTTYEYITVC 89
>SB_29350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Frame = -1
Query: 164 TPGPLSG-HHHRHHNY--FPRPPY 102
TP PLS +HHRHH+ P PPY
Sbjct: 99 TPTPLSHRYHHRHHHTSPSPSPPY 122
>SB_4879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 262 CSHCKDFIWGFGKQGFQCQVCSVVVHKRCHEYVTFTCPGADKGADSDDTRTRHNFRVY 435
C CK G+ +C+ C + KR V C G G+++ T HNF+ Y
Sbjct: 254 CETCK----GWSMDRLECETCGL--RKRSFTTVQAFCDGLFDGSNAGYTCLAHNFKGY 305
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 24.2 bits (50), Expect(2) = 3.8
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -1
Query: 143 HHHRHHNYFPRPPY 102
HHH HH Y R Y
Sbjct: 340 HHHHHHEYNRRHRY 353
Score = 22.6 bits (46), Expect(2) = 3.8
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1
Query: 176 LANETPGPLSGHHHRHHNY 120
+ TP P HHH HH +
Sbjct: 300 ITTATP-PYRYHHHHHHRH 317
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 28.3 bits (60), Expect = 4.1
Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 21/102 (20%)
Frame = +1
Query: 226 QIHAEILQAATFCSHCKDFIWG------------FGKQGFQCQVCSVV--------VHKR 345
QIH+E + CS C D I G ++ +C+VCS V H
Sbjct: 234 QIHSEQTKKTFRCSKCSDQIQGKKEYLEHRKSHPIERKIHKCEVCSRVFNKCSNLKAHAL 293
Query: 346 CHEYV-TFTCPGADKGADSDDTRTRHNFRVYTYSSPTFCDHC 468
H + + C DK HN R++ +P CD C
Sbjct: 294 SHSHERPYACDKCDKTFQRTSQLVIHN-RIHNSETPYSCDKC 334
>SB_56263| Best HMM Match : G-alpha (HMM E-Value=3.6)
Length = 700
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 432 NAKVVSRACVVGIRPLVGAGTREGNILVAS 343
NAKV+S ACV G+ L G E + + S
Sbjct: 292 NAKVMSSACVEGVEQLQGTEKNENKLGIIS 321
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = -3
Query: 498 LVDEPVQQRATVIAERWRRIRVNAKVV-----SRACVVGIRPLVGA 376
++D+ +Q+ T I R+ R + A V SRAC + +RPL G+
Sbjct: 630 IMDKVLQEMCTSICHRYGRCVMLANVTMFCNCSRACPITLRPLCGS 675
>SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 539
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 337 HKRCHE-YVTFTCPGADKGADSDDTRTRHNFRVYTYSSPTFCDHCG 471
H+R H Y + C DK +H R+++ +P CD CG
Sbjct: 287 HERTHTGYKPYHCSLCDKAFTISGNLQKH-MRIHSGETPFECDQCG 331
>SB_19065| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 531
Score = 27.9 bits (59), Expect = 5.4
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Frame = +1
Query: 238 EILQAATFCSHCKDFIWGFGKQGFQCQVCS--------VVVHKRCH-EYVTFTCPGADKG 390
E + A TF H I G++ ++CQ C + VH H E + C +K
Sbjct: 172 EFISAITFKRHA---IVHTGEKPYECQECGRRFARSTDLKVHLPVHSEDKPYKCGECEKM 228
Query: 391 ADSDDTRTRHNFRVYTYSSPTFCDHCG 471
T H R +T P CD CG
Sbjct: 229 FTRFSTLKEH-IRTHTGERPFKCDECG 254
>SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 304 GFQCQVCSVVV-HKRCHEYVT-FTCPGADKGADSDDTRTRHNFRVYTYSSPTFCDHC 468
G Q +V S ++ HKR H F C +G + R RH V++ P C++C
Sbjct: 192 GKQFRVTSDLIRHKRIHTGCKPFLCEVCGQGFNCHANRNRHLRTVHSNIRPYTCNNC 248
>SB_54075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 729
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 166 SFARPQGCPKEEECLPG 216
SF +P CP+EE CL G
Sbjct: 674 SFPQPHLCPREESCLGG 690
>SB_51299| Best HMM Match : Keratin_B2 (HMM E-Value=8)
Length = 275
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1
Query: 131 HHNYFPRPPYRFAVAKCAGK 72
++ Y+ RPPY ++A CAG+
Sbjct: 125 YYGYYLRPPYGCSMAYCAGR 144
>SB_3590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
Frame = +1
Query: 295 GKQGFQCQVCS--------VVVHKRCHE-YVTFTCPGADKGADSDDTRTRHNFRVYTYSS 447
G++ ++C C V +H H + C DKG RH R+++
Sbjct: 354 GQKPYKCDECGKCFIQSGEVKIHLMTHSGQKPYKCNVCDKGFTRHADLNRH-LRIHSGQK 412
Query: 448 PTFCDHCG 471
P CD CG
Sbjct: 413 PYKCDECG 420
>SB_38097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1099
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 304 GFQCQVCSVVVHKRCHEYVTFTCPGADKGADSDD 405
G++C VC VV YVT KG D DD
Sbjct: 348 GYKCPVCKEVVPPDHWCYVTAGDDALPKGGDDDD 381
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -1
Query: 206 HSSSLGHPCGLAN--ETPGPLSGHHHRHHNYFP 114
HS HP G ++ + PL +HH HH++ P
Sbjct: 458 HSHHHHHPTGQSSPSSSSSPLFVNHHPHHHHHP 490
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 27.5 bits (58), Expect = 7.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 143 HHHRHHNYFPRPPY 102
H HRHH++ P PY
Sbjct: 204 HRHRHHHHHPNHPY 217
>SB_56821| Best HMM Match : His_leader (HMM E-Value=0.41)
Length = 131
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 161 PGPLSGHHHRHHNYFP 114
P S HHHRHH + P
Sbjct: 19 PSSPSYHHHRHHQHHP 34
>SB_51083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1232
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 307 FQCQVCSVVVHKRCHEYVTFTCPGADKGADSDDT 408
++C VC VV YVT KG D DD+
Sbjct: 378 YKCSVCKEVVPPDHLCYVTVGADALPKGGDDDDS 411
>SB_44119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 304 GFQCQVCSVVVHKRCHEYVTFTCPGA 381
G +CQVC H+RC + C A
Sbjct: 141 GTRCQVCGYKFHQRCAAAIPIICQQA 166
>SB_43963| Best HMM Match : Ammonium_transp (HMM E-Value=0)
Length = 730
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -1
Query: 155 PLSGHHHRHHNY-FPRP 108
PLS HHH HH + P+P
Sbjct: 565 PLSHHHHHHHPHELPQP 581
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 161 PGPLSGHHHRHHNYFPRPPYR 99
P P+ HHH HH + R P R
Sbjct: 202 PPPIIIHHHHHHPFPVRVPVR 222
>SB_10554| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 194
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +1
Query: 337 HKRCHE-YVTFTCPGADKGADSDDTRTRHNFRVYTYSSPTFCDHCG 471
H R H + C KG RH R+++ P CD CG
Sbjct: 65 HLRIHSGQKPYRCDECGKGFTQSGALNRH-LRIHSGQKPYKCDECG 109
>SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 203 SSSLGHPCGLANETPGPLSGHHHRHHN 123
SSS L++ + PLS ++H HH+
Sbjct: 242 SSSSSSSSSLSSSSSSPLSSYYHHHHH 268
>SB_2643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 164 TPGPLSGHHHRHHNYFPRPP 105
TP LS HH HH+++ P
Sbjct: 42 TPSSLSYQHHHHHHHYHHHP 61
>SB_59088| Best HMM Match : AlaDh_PNT_N (HMM E-Value=4.3e-07)
Length = 217
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 230 ICDLSPGKHSSSLGHPCGLANETPGPLSGHHHRHHNYFPR 111
+ DL+ G SS LG C A TP +HHN++PR
Sbjct: 81 VWDLNQGARSSLLGGICRSAT-TP---KSSVLKHHNFYPR 116
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 27.1 bits (57), Expect = 9.5
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 203 NVYLVKDHKFMPRFFKQRRFVPTAKISYGALENKDSSAKCAVSWCTSDATSMLPSR---V 373
NV+L+K HK P +++ VP A ++ A + DSS + + T + S L V
Sbjct: 472 NVHLLKSHKCAPEWYQP---VPQALVTLAA-SSTDSSPERVLLQLTPEVVSKLKEASDIV 527
Query: 374 PAPTRGRIPTTHARDTTFAFTRILL 448
+ T+ + T ++ T +LL
Sbjct: 528 LSQTKEKSAATTSQTKTLNEQHVLL 552
>SB_19105| Best HMM Match : 7tm_1 (HMM E-Value=5e-08)
Length = 791
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 376 GADKGADSDDTRTRHNFRVYTYSSPTFCDHCGSLL 480
GAD A S D R ++VY PT HC +L
Sbjct: 538 GADDAALSCDERGFPFYQVYCELKPTTVTHCSGIL 572
>SB_16820| Best HMM Match : BRF1 (HMM E-Value=0.2)
Length = 304
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 240 DSSSSDVLFPLQRFHMGLWKTRIPVPSVQCRGAQAMPRVCYLHVSRRRQ 386
++S DVL +Q + LWK I Q + A+ R+ Y+H R+R+
Sbjct: 163 ETSEQDVLPMVQNDDIVLWKQHIYESEQQTK--SAIERLRYIHRDRKRK 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,798,155
Number of Sequences: 59808
Number of extensions: 432710
Number of successful extensions: 1658
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1603
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -