Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021866X
         (524 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   0.47 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   0.47 
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    25   0.63 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.1  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   7.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.7  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -1

Query: 218 SPGKHSSSLGHPCGLANETPGPLSGHHHRHHNYFP 114
           +PG H  ++GH     + TP     HHH  H   P
Sbjct: 411 TPGPHHHTMGHGHSHIHATP-----HHHHSHAATP 440


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 365 KVTYSWHRLCTTTLHTWHWNPCFP 294
           +V Y W       LH WHW+  +P
Sbjct: 195 RVAY-WREDIGINLHHWHWHLVYP 217


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 401 SESAPLSAPGHVKVTYSWHRLCTT 330
           +++ PLS+ G  +VT  WH   TT
Sbjct: 390 NQTGPLSSTGLAQVTGIWHSNLTT 413


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 400 DDTRTRHNFRVYTYSSPTFCDHCGS 474
           DD +   N R+ +Y S   CD C +
Sbjct: 131 DDVKILRNDRIDSYKSNLKCDKCST 155


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 170 NETPGPLSGHHHRHHNY 120
           N T GP  G  H HH++
Sbjct: 340 NHTMGPTMGPPHHHHHH 356


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -1

Query: 188 HPCGLANETPGPLSGHHHRH 129
           H CG A   P  L GH   H
Sbjct: 46  HLCGKAFSRPWLLQGHIRTH 65


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 524 HVACLNFRPWWMSPYSREPQ 465
           H+A +     W+SP  + PQ
Sbjct: 60  HIADIGADALWLSPIYKSPQ 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,103
Number of Sequences: 438
Number of extensions: 3547
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)