Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021864X
(502 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 114 4e-26
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 89 2e-18
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 37 0.007
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 35 0.029
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 35 0.038
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 34 0.050
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 34 0.050
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 34 0.050
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 34 0.067
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 33 0.088
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 33 0.088
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 33 0.088
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 33 0.088
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 33 0.15
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 33 0.15
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 32 0.20
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 32 0.27
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 31 0.36
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 31 0.36
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 31 0.36
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 31 0.36
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 31 0.36
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 31 0.36
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 31 0.36
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 31 0.47
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 31 0.47
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 31 0.47
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 31 0.47
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL034393-18|CAE17978.1| 199|Caenorhabditis elegans Hypothetical... 30 1.1
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 29 1.4
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 29 1.4
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 29 1.4
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 1.9
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 29 1.9
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 29 2.5
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 28 3.3
AF077541-7|AAC64628.1| 197|Caenorhabditis elegans Hypothetical ... 28 3.3
Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical p... 28 4.4
Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical p... 28 4.4
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 28 4.4
AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effe... 28 4.4
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 5.8
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 27 5.8
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 27 5.8
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 27 5.8
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 27 5.8
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 27 5.8
AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical... 27 5.8
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 27 5.8
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 27 7.6
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 27 7.6
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 27 7.6
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 7.6
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 27 7.6
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 27 7.6
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 27 7.6
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 27 7.6
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 27 7.6
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 27 7.6
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 114 bits (274), Expect = 4e-26
Identities = 50/86 (58%), Positives = 74/86 (86%)
Frame = +3
Query: 243 KEGRGVILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLE 422
++ G+I++MI+EGKIAGRA+L+ G+PG GKTAIA+ +++ LG DTPF S+ SEI+S E
Sbjct: 49 RQAAGLIVKMIQEGKIAGRALLVTGEPGAGKTAIAIAISKELGEDTPFVSIVASEIYSNE 108
Query: 423 MSKTEALTQAIRKSIGIRIKEESEII 500
++KTEALTQA R+++GI+IKEE+E++
Sbjct: 109 INKTEALTQAFRRALGIQIKEETEVL 134
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1
Query: 124 VRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAA 255
V+ I ++ER HSHI GLGL+D LE VS GMVGQ AR+AA
Sbjct: 9 VKDIVKVERTSVHSHITGLGLNDRLEAEYVSGGMVGQVAARQAA 52
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 89.0 bits (211), Expect = 2e-18
Identities = 41/94 (43%), Positives = 61/94 (64%)
Frame = +3
Query: 216 AGHGRPEDGKEGRGVILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSM 395
AG + +++ MIR +AGRAVL+AG P TGKTAIA+ ++Q LG PF +
Sbjct: 56 AGFVGQAPARTAASIVVDMIRLKCMAGRAVLIAGPPATGKTAIALAMSQELGDGVPFVPL 115
Query: 396 AGSEIFSLEMSKTEALTQAIRKSIGIRIKEESEI 497
SE+FS E+ KTE L ++ R++IG+R+KE ++
Sbjct: 116 VASEVFSNEVKKTEVLMRSFRRAIGLRVKETKDV 149
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = +1
Query: 94 ASIAAAQVQEVRSITR-IERIGAHSHIRGLGLD-DSLEPRQVSQGMVGQKMARKAA 255
+S A ++EV+ + I+RI AHSH++GLG+D ++ E + G VGQ AR AA
Sbjct: 13 SSSRLAPIEEVKPTPKQIKRIAAHSHVKGLGIDTETQEAHYEAAGFVGQAPARTAA 68
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 37.1 bits (82), Expect = 0.007
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +3
Query: 207 TSIAG-HGRPEDGKEGRGVIL-----QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQAL 368
T IAG G E KE VIL Q+ + + +LL G PGTGK+ IA +A
Sbjct: 118 TDIAGLEGAKEALKEA--VILPIKFPQLFTGNRKPWQGILLFGPPGTGKSYIAKAVATEA 175
Query: 369 GPDTPFTSMAGSEIFSLEMSKTEALTQ 449
G T F S++ S++ S + ++E L +
Sbjct: 176 GEST-FFSISSSDLMSKWLGESEKLVK 201
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 35.1 bits (77), Expect = 0.029
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQAL 368
R +LL G PGTGKT++ GLAQ L
Sbjct: 173 RLILLTGPPGTGKTSLCKGLAQHL 196
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 34.7 bits (76), Expect = 0.038
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 455
+ +LL G PG GKT +A +A G + F S+ G E+ ++ + ++E + +
Sbjct: 569 QGILLCGPPGCGKTLLAKAVANETGMN--FISVKGPELLNMYVGESERAVRTV 619
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 437
R ++ G PG GKT A +A L P +A +E+ S +TE
Sbjct: 240 RGFIVHGPPGCGKTMFAQAVAGELA--IPMLQLAATELVSGVSGETE 284
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 34.3 bits (75), Expect = 0.050
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 455
+ +LL G PG GKT +A +A G + F S+ G E+ ++ + ++E + +
Sbjct: 569 QGILLCGPPGCGKTLLAKAVANETGMN--FFSVKGPELLNMYVGESERAVRTV 619
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 437
R ++ G PG GKT A +A L P +A +E+ S +TE
Sbjct: 240 RGFIVHGPPGCGKTMFAQAVAGELA--IPMLQLAATELVSGVSGETE 284
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE 407
R LL G PG GKT +A LA PF SM GSE
Sbjct: 319 RGALLTGPPGCGKTLLAKALAAE--STVPFISMNGSE 353
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE 407
R LL G PG GKT +A LA PF SM GSE
Sbjct: 319 RGALLTGPPGCGKTLLAKALAAE--STVPFISMNGSE 353
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 33.9 bits (74), Expect = 0.067
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE 407
+ VLL G PGTGKT +A +A PF AGSE
Sbjct: 235 KGVLLVGPPGTGKTLLARAIAGE--AQVPFFHTAGSE 269
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 33.5 bits (73), Expect = 0.088
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 440
R +LL G PGTGKT IA +A G + F + G E+ S ++E+
Sbjct: 245 RGILLFGPPGTGKTLIARAVANETG--SFFFLINGPEVMSKMSGESES 290
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 273 IREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 440
++ G R VL G PG GKT +A +A F S+ G E+ ++ ++EA
Sbjct: 510 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC--QANFISIKGPELLTMWFGESEA 563
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 33.5 bits (73), Expect = 0.088
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 440
R +LL G PGTGKT IA +A G F + G EI S ++E+
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKMSGESES 289
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 273 IREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 440
++ G R VL G PG GKT +A +A F S+ G E+ ++ ++EA
Sbjct: 509 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC--QANFISIKGPELLTMWFGESEA 562
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 33.5 bits (73), Expect = 0.088
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 440
R +LL G PGTGKT IA +A G F + G EI S ++E+
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKMSGESES 289
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 273 IREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 440
++ G R VL G PG GKT +A +A F S+ G E+ ++ ++EA
Sbjct: 509 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC--QANFISIKGPELLTMWFGESEA 562
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 33.5 bits (73), Expect = 0.088
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 273 IREGKIAGRAVLLAGQPGTGKTAIAMGLAQALG-PDTPFTSMAGSEIFSLEMSKTEALTQ 449
I G + + +LL G PG GK++ M LAQ G P T +++ L S LT+
Sbjct: 1342 IARGLLISKPILLEGAPGCGKSSTVMALAQLTGNPITRLNLSDQTDLSDLFGSDVPVLTE 1401
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 282 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 455
G A + V+L G+PGTGKT +A +A + F GS++ + + L + I
Sbjct: 213 GITAPKGVILYGEPGTGKTLLAKAVANS--TSATFIRATGSDLVQKQSGEGARLVRQI 268
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSL 419
+ +L G PGTGKT +A A A + PF +++GSE +
Sbjct: 327 KGAILTGPPGTGKTLLAK--ATAGEANVPFITVSGSEFLEM 365
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEAL 443
R V+ G PGTGKT A LAQ G D + + G +I L A+
Sbjct: 343 RNVMFYGPPGTGKTLFAKSLAQHSGLD--YAVLTGGDIAPLGRDGVSAI 389
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 219 GHGRPEDGKEG--RGVILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQAL 368
GH +D KE + + ++R+ I G+ + G PG GKT+IA +A AL
Sbjct: 479 GHYGMKDVKERIMEFIAVNLLRKS-IGGKILCFHGPPGVGKTSIAKSIATAL 529
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 455
+A++LAG PGTGKT IA +A + F +++ +++ S +E + + +
Sbjct: 227 KAMVLAGPPGTGKTLIARAIASE--SSSTFFTVSSTDLSSKWRGDSEKIVRLL 277
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 455
+A++LAG PGTGKT IA +A + F +++ +++ S +E + + +
Sbjct: 227 KAMVLAGPPGTGKTLIARAIASE--SSSTFFTVSSTDLSSKWRGDSEKIVRLL 277
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.36
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 300 AVLLAGQPGTGKTAIAMGLAQALG 371
++ ++GQPGTGKTA M + ++LG
Sbjct: 197 SIYVSGQPGTGKTATTMRVLKSLG 220
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 455
+A++LAG PGTGKT IA +A + F +++ +++ S +E + + +
Sbjct: 227 KAMVLAGPPGTGKTLIARAIASE--SSSTFFTVSSTDLSSKWRGDSEKIVRLL 277
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +3
Query: 243 KEGRGVILQMIREGKIAGRA-----VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE 407
+E + +L+ IR RA ++L G PG GKT IA +A F S+ G E
Sbjct: 471 EETKQTVLESIRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEF--KIAFLSVKGPE 528
Query: 408 IFSLEMSKTE 437
+ + + ++E
Sbjct: 529 LLNKYVGQSE 538
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +3
Query: 243 KEGRGVILQMIREGKIAGRA-----VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE 407
+E + +L+ IR RA ++L G PG GKT IA +A F S+ G E
Sbjct: 471 EETKQTVLESIRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEF--KIAFLSVKGPE 528
Query: 408 IFSLEMSKTE 437
+ + + ++E
Sbjct: 529 LLNKYVGQSE 538
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +3
Query: 243 KEGRGVILQMIREGKIAGRA-----VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE 407
+E + +L+ IR RA ++L G PG GKT IA +A F S+ G E
Sbjct: 471 EETKQTVLESIRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEF--KIAFLSVKGPE 528
Query: 408 IFSLEMSKTE 437
+ + + ++E
Sbjct: 529 LLNKYVGQSE 538
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 410
+ VLL G PGTGKT +A +A + F ++GSE+
Sbjct: 194 KGVLLFGPPGTGKTLLARAVAH--HTECTFIRVSGSEL 229
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 288 IAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 401
+ G + G PG GKT+IA +A+++G S+ G
Sbjct: 327 VKGMILCFTGPPGIGKTSIAKAIAESMGRKFQRVSLGG 364
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 410
+ VLL G PGTGKT +A +A + F ++GSE+
Sbjct: 189 KGVLLYGPPGTGKTLLARAVAH--HTECTFIRVSGSEL 224
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 410
+ VLL G PGTGKT +A +A + F ++GSE+
Sbjct: 210 KGVLLYGPPGTGKTLLARAVAH--HTECTFIRVSGSEL 245
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 30.7 bits (66), Expect = 0.62
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 410
+ VLL G PGTGKT A +A D F + GSE+
Sbjct: 212 KGVLLYGPPGTGKTLCARAVANR--TDACFIRVIGSEL 247
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 30.7 bits (66), Expect = 0.62
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALG 371
R +LL G PG GKT +A +A+A G
Sbjct: 115 RGILLYGPPGCGKTLLAKAVARAAG 139
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 30.7 bits (66), Expect = 0.62
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALG 371
R +LL G PG GKT +A +A+A G
Sbjct: 118 RGILLYGPPGCGKTLLAKAVARAAG 142
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 440
R +LL G PGTGKT +A + + L P + G +I + ++E+
Sbjct: 331 RGILLFGPPGTGKTLMARQIGKMLNAREP-KIVNGPQILDKYVGESES 377
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE--IFSLEMSKTEALTQA 452
R V+LAG TGKT++A +A++ D PF + E + E +K AL +A
Sbjct: 614 RTVVLAGAAKTGKTSLAAQMAKS--SDFPFVKVISPEDTVGFSESAKCMALKKA 665
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 440
R +LL G PGTGKT +A + + L P + G +I + ++E+
Sbjct: 331 RGILLFGPPGTGKTLMARQIGKMLNAREP-KIVNGPQILDKYVGESES 377
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE--IFSLEMSKTEALTQA 452
R V+LAG TGKT++A +A++ D PF + E + E +K AL +A
Sbjct: 614 RTVVLAGAAKTGKTSLAAQMAKS--SDFPFVKVISPEDTVGFSESAKCMALKKA 665
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 440
R +LL G PGTGKT +A + + L P + G +I + ++E+
Sbjct: 265 RGILLFGPPGTGKTLMARQIGKMLNAREP-KIVNGPQILDKYVGESES 311
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE--IFSLEMSKTEALTQA 452
R V+LAG TGKT++A +A++ D PF + E + E +K AL +A
Sbjct: 548 RTVVLAGAAKTGKTSLAAQMAKS--SDFPFVKVISPEDTVGFSESAKCMALKKA 599
>AL034393-18|CAE17978.1| 199|Caenorhabditis elegans Hypothetical
protein Y18D10A.24 protein.
Length = 199
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 166 HIRGLGLDDSLEPRQVSQGMVGQKMA--RKAAESSYR*FEKVR*RDEQCYWPVSLVQGRL 339
H G G D + P Q +G + A++S R F D CYWP++ G+L
Sbjct: 138 HWGGPGPDGWVNPPYGVQSCMGMYIHPWSDTAQASVRSFIHADLDDLHCYWPMNYACGKL 197
Query: 340 PS 345
P+
Sbjct: 198 PT 199
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +3
Query: 276 REGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 410
R G + LL G PGTGKT +A +A L D F + S I
Sbjct: 170 RVGITPPKGCLLFGPPGTGKTLLARAVASQL--DCNFLKVVSSAI 212
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +3
Query: 276 REGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 410
R G + LL G PGTGKT +A +A L D F + S I
Sbjct: 178 RVGITPPKGCLLFGPPGTGKTLLARAVASQL--DCNFLKVVSSAI 220
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 455
+ VLL G PGTGKT I G A F +++ S + S + + E L +A+
Sbjct: 350 KGVLLFGPPGTGKTMI--GRCVASQCKATFFNISASSLTSKWVGEGEKLVRAL 400
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALG 371
+A LL+G PG GKT A Q LG
Sbjct: 341 KAALLSGSPGVGKTTCAYMACQQLG 365
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -1
Query: 370 PRACANPIAMAVFPVPG*PANNTARPAILPSRIICKMTPRPSLPSSGRPCPA 215
P CANP + V P+P P PA P P P +P P PA
Sbjct: 62 PYPCANPPCIVVEPMPVAPP--APAPAYNPYPCATPPCPLPYIPEPVAPVPA 111
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 410
+ V+L G PGTGKT +A +A F + GSE+
Sbjct: 223 KGVILYGCPGTGKTLLAKAVANQ--TSATFLRIVGSEL 258
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSL 419
+ VL+ G PGTGKT +A A A + F +AG ++ +
Sbjct: 212 KGVLMYGPPGTGKTMMAR--AVAAQTKSTFLKLAGPQLVQM 250
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 303 VLLAGQPGTGKTAIAMGLAQALG 371
+L+ G PGTGK+ + +A+ LG
Sbjct: 12 ILVTGSPGTGKSTLGQQVAEKLG 34
>AF077541-7|AAC64628.1| 197|Caenorhabditis elegans Hypothetical
protein Y23H5A.2 protein.
Length = 197
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 283 PSRIICKMTPRPSLPSSGRPCPAILVL 203
P R+I TP+P PS+ P P I +L
Sbjct: 43 PVRLITSATPQPIAPSTSNPRPLISLL 69
>Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 218 CDTCLGSKESSKPSPLMWECAPILSMRVIERTSC 117
C+T +G + SK P + PI S I+ T C
Sbjct: 22 CETSMGKSKKSKNLPRFVKIQPIFSSEKIKETVC 55
>Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 218 CDTCLGSKESSKPSPLMWECAPILSMRVIERTSC 117
C+T +G + SK P + PI S I+ T C
Sbjct: 22 CETSMGKSKKSKNLPRFVKIQPIFSSEKIKETVC 55
>Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 163 SHIRGLGLDDSLEPRQVSQGMVGQKMARKAAESSYR 270
+HI LG+DD L P +S MV + + RK + S YR
Sbjct: 196 NHIEYLGMDDILGP--ISISMVREIVDRKESYSIYR 229
>Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 163 SHIRGLGLDDSLEPRQVSQGMVGQKMARKAAESSYR 270
+HI LG+DD L P +S MV + + RK + S YR
Sbjct: 196 NHIEYLGMDDILGP--ISISMVREIVDRKESYSIYR 229
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 279 EGKIAGRAV---LLAGQPGTGKTAIAMGLAQALGPDTPF 386
+G + GR + L G PGTGKT+ A+ + L P F
Sbjct: 40 KGALQGRDLPHLLFYGPPGTGKTSAALAFCRQLFPKNIF 78
>AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effect
sterile 2 protein.
Length = 773
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 218 CDTCLGSKESSKPSPLMWECAPILSMRVIERTSC 117
C+T +G + SK P + PI S I+ T C
Sbjct: 22 CETSMGKSKKSKNLPRFVKIQPIFSSEKIKETVC 55
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -1
Query: 358 ANPIAMAVFPVPG*PANNTARPAILPSRIICKMTPRPSLPSSGRPCPAILVLAPKSHLSP 179
A P+A PVP A A PA + + + P + ++ RP A LAP + ++P
Sbjct: 85 AIPLAAPALPVPVAAAPFFASPAPVLAAPAPLLAPPAPVFAAPRPVFAAPALAPVAPMAP 144
Query: 178 VL 173
VL
Sbjct: 145 VL 146
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +3
Query: 258 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 437
+ILQ+++ + R ++LAG G GK+ +A LA + T + + I E +K E
Sbjct: 1248 MILQLVKS-ILTERRLVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1306
Query: 438 ALTQAIRKSIGIRIKEESEII 500
L R +R KE +I
Sbjct: 1307 LLQVERRLEKILRSKESCIVI 1327
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +3
Query: 258 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 437
+ILQ+++ + R ++LAG G GK+ +A LA + T + + I E +K E
Sbjct: 1282 MILQLVKS-ILTERRLVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1340
Query: 438 ALTQAIRKSIGIRIKEESEII 500
L R +R KE +I
Sbjct: 1341 LLQVERRLEKILRSKESCIVI 1361
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +3
Query: 258 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 437
+ILQ+++ + R ++LAG G GK+ +A LA + T + + I E +K E
Sbjct: 1219 MILQLVKS-ILTERRLVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1277
Query: 438 ALTQAIRKSIGIRIKEESEII 500
L R +R KE +I
Sbjct: 1278 LLQVERRLEKILRSKESCIVI 1298
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +3
Query: 258 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 437
+ILQ+++ + R ++LAG G GK+ +A LA + T + + I E +K E
Sbjct: 1353 MILQLVKS-ILTERRLVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1411
Query: 438 ALTQAIRKSIGIRIKEESEII 500
L R +R KE +I
Sbjct: 1412 LLQVERRLEKILRSKESCIVI 1432
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +3
Query: 258 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 437
+ILQ+++ + R ++LAG G GK+ +A LA + T + + I E +K E
Sbjct: 1248 MILQLVKS-ILTERRLVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1306
Query: 438 ALTQAIRKSIGIRIKEESEII 500
L R +R KE +I
Sbjct: 1307 LLQVERRLEKILRSKESCIVI 1327
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +3
Query: 258 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 437
+ILQ+++ + R ++LAG G GK+ +A LA + T + + I E +K E
Sbjct: 1282 MILQLVKS-ILTERRLVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1340
Query: 438 ALTQAIRKSIGIRIKEESEII 500
L R +R KE +I
Sbjct: 1341 LLQVERRLEKILRSKESCIVI 1361
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +3
Query: 258 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 437
+ILQ+++ + R ++LAG G GK+ +A LA + T + + I E +K E
Sbjct: 1219 MILQLVKS-ILTERRLVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1277
Query: 438 ALTQAIRKSIGIRIKEESEII 500
L R +R KE +I
Sbjct: 1278 LLQVERRLEKILRSKESCIVI 1298
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +3
Query: 258 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 437
+ILQ+++ + R ++LAG G GK+ +A LA + T + + I E +K E
Sbjct: 1353 MILQLVKS-ILTERRLVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1411
Query: 438 ALTQAIRKSIGIRIKEESEII 500
L R +R KE +I
Sbjct: 1412 LLQVERRLEKILRSKESCIVI 1432
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical protein
F45E10.1e protein.
Length = 1234
Score = 27.5 bits (58), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +3
Query: 258 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 437
+ILQ+++ + R ++LAG G GK+ +A LA + T + + I E +K E
Sbjct: 933 MILQLVKS-ILTERRLVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 991
Query: 438 ALTQAIRKSIGIRIKEESEII 500
L R +R KE +I
Sbjct: 992 LLQVERRLEKILRSKESCIVI 1012
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE 407
R VL+ G PG GKT +A A A F + GSE
Sbjct: 196 RGVLMYGPPGCGKTMLAK--AVAANTAASFIRVVGSE 230
>AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical
protein Y43F8C.12 protein.
Length = 1119
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 243 KEGRGVILQMIREGKIAGRAVLLAGQPGTGKTAIAMGL 356
+EG ++L I AG + + G+ G GK++ A+ L
Sbjct: 886 REGLDLVLHDISADVAAGEKIGIVGRTGAGKSSFALAL 923
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 27.5 bits (58), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +3
Query: 258 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 437
+ILQ+++ + R ++LAG G GK+ +A LA + T + + I E +K E
Sbjct: 1282 MILQLVKS-ILTERRLVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1340
Query: 438 ALTQAIRKSIGIRIKEESEII 500
L R +R KE +I
Sbjct: 1341 LLQVERRLEKILRSKESCIVI 1361
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLA 359
+ V+ G PGTGKT +A LA
Sbjct: 426 KGVVFYGPPGTGKTLVARALA 446
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLA 359
+ V+ G PGTGKT +A LA
Sbjct: 424 KGVVFYGPPGTGKTLVARALA 444
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLA 359
+ V+ G PGTGKT +A LA
Sbjct: 426 KGVVFYGPPGTGKTLVARALA 446
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLA 359
+ V+ G PGTGKT +A LA
Sbjct: 426 KGVVFYGPPGTGKTLVARALA 446
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLA 359
+ V+ G PGTGKT +A LA
Sbjct: 424 KGVVFYGPPGTGKTLVARALA 444
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLA 359
+ V+ G PGTGKT +A LA
Sbjct: 426 KGVVFYGPPGTGKTLVARALA 446
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 297 RAVLLAGQPGTGKTAIAMGLA 359
+ V+ G PGTGKT +A LA
Sbjct: 426 KGVVFYGPPGTGKTLVARALA 446
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 289 ILPSRIICKMTPRPSLPSSGRPCPAILVLAPKSHLS 182
+ PS + M+P SLP P ++V+ HLS
Sbjct: 332 VAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLS 367
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 289 ILPSRIICKMTPRPSLPSSGRPCPAILVLAPKSHLS 182
+ PS + M+P SLP P ++V+ HLS
Sbjct: 330 VAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLS 365
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 289 ILPSRIICKMTPRPSLPSSGRPCPAILVLAPKSHLS 182
+ PS + M+P SLP P ++V+ HLS
Sbjct: 330 VAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLS 365
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 289 ILPSRIICKMTPRPSLPSSGRPCPAILVLAPKSHLS 182
+ PS + M+P SLP P ++V+ HLS
Sbjct: 330 VAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLS 365
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 289 ILPSRIICKMTPRPSLPSSGRPCPAILVLAPKSHLS 182
+ PS + M+P SLP P ++V+ HLS
Sbjct: 330 VAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLS 365
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,814,427
Number of Sequences: 27780
Number of extensions: 224020
Number of successful extensions: 656
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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