Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021864X
         (502 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.59 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   0.59 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   7.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.5  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           21   9.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.5  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 387 TSMAGSEIFSLEMSKTEALTQAIRKSIGI 473
           T   G E+ S  M    ALT A++ S+G+
Sbjct: 794 TKYTGCELTSESMPLQSALTAAVQTSVGV 822


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 387 TSMAGSEIFSLEMSKTEALTQAIRKSIGI 473
           T   G E+ S  M    ALT A++ S+G+
Sbjct: 884 TKYTGCELTSESMPLQSALTAAVQTSVGV 912


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 294 GRAVLLAGQPGTGKTA 341
           GR ++   Q G+GKTA
Sbjct: 233 GRDLMACAQTGSGKTA 248


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 430 LLISKENISEPAMLVNGVSGPRACANPI 347
           +L +K        L+   SGP   +NP+
Sbjct: 166 ILKTKNECDHVQFLITNTSGPGVVSNPM 193


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 234 LADHALRYLSWLQRVI*AQSSNVGV 160
           LA +   YLS   RVI A+   VGV
Sbjct: 63  LAGNRYIYLSGTDRVIRAKLGKVGV 87


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 224 WSARRWQG 247
           W+AR WQG
Sbjct: 303 WAARPWQG 310


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 224 WSARRWQG 247
           W+AR WQG
Sbjct: 303 WAARPWQG 310


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 224 WSARRWQG 247
           W+AR WQG
Sbjct: 303 WAARPWQG 310


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 430 LLISKENISEPAMLVNGVSGPRACANPI 347
           +L +K        L+   SGP   +NP+
Sbjct: 166 ILKTKNECDHVQFLITNTSGPGVVSNPM 193


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,217
Number of Sequences: 438
Number of extensions: 2652
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)