Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021863
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF432219-1|AAL99925.1| 241|Homo sapiens CLL-associated antigen ... 34 0.38
BC069237-1|AAH69237.1| 624|Homo sapiens UBQLN2 protein protein. 31 4.7
AL442081-1|CAC09446.1| 588|Homo sapiens hypothetical protein pr... 31 4.7
AL354793-1|CAD13519.1| 624|Homo sapiens ubiquilin 2 protein. 31 4.7
AK074126-1|BAB84952.1| 677|Homo sapiens FLJ00198 protein protein. 31 4.7
AF293385-1|AAG02474.1| 624|Homo sapiens PLIC-2 protein. 31 4.7
AF189009-1|AAF17237.1| 624|Homo sapiens ubiquitin-like product ... 31 4.7
AB015344-1|BAA34801.1| 408|Homo sapiens HRIHFB2157 protein. 31 4.7
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 30 6.2
S83182-1|AAB46909.1| 560|Homo sapiens hyaluronan-binding protei... 30 6.2
D49742-1|BAA08576.1| 560|Homo sapiens HGF activator like protei... 30 6.2
BC031412-1|AAH31412.1| 560|Homo sapiens hyaluronan binding prot... 30 6.2
AY534754-1|AAS16352.1| 560|Homo sapiens hyaluronan binding prot... 30 6.2
AL390197-1|CAH71108.1| 560|Homo sapiens hyaluronan binding prot... 30 6.2
M60832-1|AAA62822.1| 635|Homo sapiens alpha-2 type VIII collage... 30 8.2
>AF432219-1|AAL99925.1| 241|Homo sapiens CLL-associated antigen
KW-6 protein.
Length = 241
Score = 34.3 bits (75), Expect = 0.38
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = +3
Query: 369 RAAEDAGGVRHRPAGRRLPDRH*RFPEASNGRDACEGASVHERPG 503
RA G R RPA RRL + R P + R A EG V PG
Sbjct: 179 RAVAQGGAPRLRPAARRLRELAGRAPRGQHQRGADEGVQVRTLPG 223
>BC069237-1|AAH69237.1| 624|Homo sapiens UBQLN2 protein protein.
Length = 624
Score = 30.7 bits (66), Expect = 4.7
Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
Frame = +3
Query: 48 IELPAAPFDLQ-VLDEVGLDSGNISGCPTNSDYVRYVMTKLPARMREYCESEFGRQPYLP 224
+E+ P +Q ++ L N+ P + +R + T + M + +FG P+
Sbjct: 235 LEIARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQEQFGGNPFAS 294
Query: 225 AAEELCIAQLRPPPNGTERWCWNRSWGPAAAPRGCCSWTTATCRGAG 365
+ P R W P A + + +T T G+G
Sbjct: 295 VGSSSSSGEGTQPSRTENRDPLPNPWAPPPATQSSATTSTTTSTGSG 341
>AL442081-1|CAC09446.1| 588|Homo sapiens hypothetical protein
protein.
Length = 588
Score = 30.7 bits (66), Expect = 4.7
Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
Frame = +3
Query: 48 IELPAAPFDLQ-VLDEVGLDSGNISGCPTNSDYVRYVMTKLPARMREYCESEFGRQPYLP 224
+E+ P +Q ++ L N+ P + +R + T + M + +FG P+
Sbjct: 199 LEIARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQEQFGGNPFAS 258
Query: 225 AAEELCIAQLRPPPNGTERWCWNRSWGPAAAPRGCCSWTTATCRGAG 365
+ P R W P A + + +T T G+G
Sbjct: 259 VGSSSSSGEGTQPSRTENRDPLPNPWAPPPATQSSATTSTTTSTGSG 305
>AL354793-1|CAD13519.1| 624|Homo sapiens ubiquilin 2 protein.
Length = 624
Score = 30.7 bits (66), Expect = 4.7
Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
Frame = +3
Query: 48 IELPAAPFDLQ-VLDEVGLDSGNISGCPTNSDYVRYVMTKLPARMREYCESEFGRQPYLP 224
+E+ P +Q ++ L N+ P + +R + T + M + +FG P+
Sbjct: 235 LEIARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQEQFGGNPFAS 294
Query: 225 AAEELCIAQLRPPPNGTERWCWNRSWGPAAAPRGCCSWTTATCRGAG 365
+ P R W P A + + +T T G+G
Sbjct: 295 VGSSSSSGEGTQPSRTENRDPLPNPWAPPPATQSSATTSTTTSTGSG 341
>AK074126-1|BAB84952.1| 677|Homo sapiens FLJ00198 protein protein.
Length = 677
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 303 GPAAAPRGCCSWTTATCRGAGLRAAEDAG-GVRHRPAGRRL 422
G AAAP G C GA AAE AG G + PAGR +
Sbjct: 535 GAAAAPGGAAGEPAGPCPGAA--AAEPAGAGAQQPPAGREV 573
>AF293385-1|AAG02474.1| 624|Homo sapiens PLIC-2 protein.
Length = 624
Score = 30.7 bits (66), Expect = 4.7
Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
Frame = +3
Query: 48 IELPAAPFDLQ-VLDEVGLDSGNISGCPTNSDYVRYVMTKLPARMREYCESEFGRQPYLP 224
+E+ P +Q ++ L N+ P + +R + T + M + +FG P+
Sbjct: 235 LEIARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQEQFGGNPFAS 294
Query: 225 AAEELCIAQLRPPPNGTERWCWNRSWGPAAAPRGCCSWTTATCRGAG 365
+ P R W P A + + +T T G+G
Sbjct: 295 VGSSSSSGEGTQPSRTENRDPLPNPWAPPPATQSSATTSTTTSTGSG 341
>AF189009-1|AAF17237.1| 624|Homo sapiens ubiquitin-like product
Chap1/Dsk2 protein.
Length = 624
Score = 30.7 bits (66), Expect = 4.7
Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
Frame = +3
Query: 48 IELPAAPFDLQ-VLDEVGLDSGNISGCPTNSDYVRYVMTKLPARMREYCESEFGRQPYLP 224
+E+ P +Q ++ L N+ P + +R + T + M + +FG P+
Sbjct: 235 LEIARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQEQFGGNPFAS 294
Query: 225 AAEELCIAQLRPPPNGTERWCWNRSWGPAAAPRGCCSWTTATCRGAG 365
+ P R W P A + + +T T G+G
Sbjct: 295 VGSSSSSGEGTQPSRTENRDPLPNPWAPPPATQSSATTSTTTSTGSG 341
>AB015344-1|BAA34801.1| 408|Homo sapiens HRIHFB2157 protein.
Length = 408
Score = 30.7 bits (66), Expect = 4.7
Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
Frame = +3
Query: 48 IELPAAPFDLQ-VLDEVGLDSGNISGCPTNSDYVRYVMTKLPARMREYCESEFGRQPYLP 224
+E+ P +Q ++ L N+ P + +R + T + M + +FG P+
Sbjct: 19 LEIARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQEQFGGNPFAS 78
Query: 225 AAEELCIAQLRPPPNGTERWCWNRSWGPAAAPRGCCSWTTATCRGAG 365
+ P R W P A + + +T T G+G
Sbjct: 79 VGSSSSSGEGTQPSRTENRDPLPNPWAPPPATQSSATTSTTTSTGSG 125
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 30.3 bits (65), Expect = 6.2
Identities = 23/89 (25%), Positives = 31/89 (34%), Gaps = 1/89 (1%)
Frame = +3
Query: 258 PPPNGTERWCWNRSWGPAAAPRGCCSWTTATCRGAG-LRAAEDAGGVRHRPAGRRLPDRH 434
PP T RS P++ C +WT+AT G E + G H PA +H
Sbjct: 863 PPVPNTTATTHGRSLSPSSPHTVCTAWTSATSGILGTTHITEPSTGTSHTPAATTGTTQH 922
Query: 435 *RFPEASNGRDACEGASVHERPGQGRAAH 521
P S+ + PG H
Sbjct: 923 -STPALSSPHPSSRTTESPPSPGTTTPGH 950
>S83182-1|AAB46909.1| 560|Homo sapiens hyaluronan-binding protein
protein.
Length = 560
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 359 CRSPRCGRCWRSSSPTCRPSPARSSLKISRSKQRPR 466
C+ P G P CRP+P ++ SR K+R +
Sbjct: 138 CKHPYTGPSCSQVVPVCRPNPCQNGATCSRHKRRSK 173
>D49742-1|BAA08576.1| 560|Homo sapiens HGF activator like protein
protein.
Length = 560
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 359 CRSPRCGRCWRSSSPTCRPSPARSSLKISRSKQRPR 466
C+ P G P CRP+P ++ SR K+R +
Sbjct: 138 CKHPYTGPSCSQVVPVCRPNPCQNGATCSRHKRRSK 173
>BC031412-1|AAH31412.1| 560|Homo sapiens hyaluronan binding protein
2 protein.
Length = 560
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 359 CRSPRCGRCWRSSSPTCRPSPARSSLKISRSKQRPR 466
C+ P G P CRP+P ++ SR K+R +
Sbjct: 138 CKHPYTGPSCSQVVPVCRPNPCQNGATCSRHKRRSK 173
>AY534754-1|AAS16352.1| 560|Homo sapiens hyaluronan binding protein
2 protein.
Length = 560
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 359 CRSPRCGRCWRSSSPTCRPSPARSSLKISRSKQRPR 466
C+ P G P CRP+P ++ SR K+R +
Sbjct: 138 CKHPYTGPSCSQVVPVCRPNPCQNGATCSRHKRRSK 173
>AL390197-1|CAH71108.1| 560|Homo sapiens hyaluronan binding protein
2 protein.
Length = 560
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 359 CRSPRCGRCWRSSSPTCRPSPARSSLKISRSKQRPR 466
C+ P G P CRP+P ++ SR K+R +
Sbjct: 138 CKHPYTGPSCSQVVPVCRPNPCQNGATCSRHKRRSK 173
>M60832-1|AAA62822.1| 635|Homo sapiens alpha-2 type VIII collagen
protein.
Length = 635
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = +2
Query: 35 RPGLHRAAGRALRPASAGRGR---PGLWEHIGLPHELGLR---AIRHDEAPRADEG 184
+PGLH G A P + G+ PGL ++G P + GLR IR D+ R G
Sbjct: 39 KPGLHGQPGPAGPPGFSRMGKAGPPGLPGNVGPPGQPGLRGEPGIRGDQGLRGPPG 94
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,245,116
Number of Sequences: 237096
Number of extensions: 2232129
Number of successful extensions: 8680
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8671
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -