Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021862
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   3.8  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   6.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   6.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 7    WTGWATSFTWPTRSDRRSTCSSWTAAGT 90
            W+   TS  W T + RR+T +  T   T
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTST 1070


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 1   WLWTGWATSFTWPT 42
           W+W  W  S TW T
Sbjct: 465 WIWLLWLLSQTWIT 478


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 1   WLWTGWATSFTWPT 42
           W+W  W  S TW T
Sbjct: 465 WIWLLWLLSQTWIT 478


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 1   WLWTGWATSFTWPT 42
           W+W  W  S TW T
Sbjct: 465 WIWLLWLLSQTWIT 478


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 1   WLWTGWATSFTWPT 42
           W+W  W  S TW T
Sbjct: 465 WIWLLWLLSQTWIT 478


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 263 NDEDRGIHKSSMNREKDRHDK 325
           +D+D  +   S +REKD  DK
Sbjct: 157 DDDDDALVSDSDDREKDEEDK 177


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 549 YWWRRSYRPGWSR 511
           Y+WR+ Y   W R
Sbjct: 120 YYWRQQYEDFWHR 132


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 236 VQSVSNTVENDEDRGIHKSSMNREKD 313
           V SVS +   DEDR    SSM +  D
Sbjct: 33  VSSVSQSEAGDEDRFSFTSSMVQSLD 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,369
Number of Sequences: 336
Number of extensions: 3276
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)