Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021861
         (841 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          26   1.6  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       25   2.2  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    25   3.8  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   6.6  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = -1

Query: 463 RSRIQSPVPTRGLTEPILIKALRPVFHVSLSGGEVRAAEGWRERNG---APHTRHPPRPM 293
           RSR ++P+P RG     L +   P   V+ +     A EG R R     A   R  PR  
Sbjct: 455 RSRSRTPLPARGHVRARLTRRTIPPTRVAAAAA---APEGRRRRRAIARARRRRCRPRAR 511

Query: 292 RN 287
           RN
Sbjct: 512 RN 513


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -1

Query: 532 DCGKCLWNSSA-APCLAVCCLSSHRSRIQSPVPTRGLTEPILIKALRPVFHVSLSGGEVR 356
           D G+CL +  A      VCC+ S R R +    T    +PI +  +  +  V L+  E R
Sbjct: 305 DRGECLKDHCAYGGKTCVCCIESFRRRRRRDAFTPSKDDPIFVNEM--LHKVDLTVNE-R 361

Query: 355 AAEG 344
             EG
Sbjct: 362 GTEG 365


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 393 GRKAFI-RIGSVSPRVGTGLCIRER*DERQQTAKQGAAEEFQRHFPQSDQRRRCSIIIRV 569
           G +A + R G ++  +GTG   R R DER    +            ++D  R  + +I  
Sbjct: 689 GSRALVTRRGDLTIEIGTGAAARPRVDERLDAVQLSIFNHRFMSIARADGARAAAHLIST 748

Query: 570 HLSAISS 590
           ++ + S+
Sbjct: 749 NIKSGST 755


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 393 GRKAFI-RIGSVSPRVGTGLCIRER*DER 476
           G +A + R G ++  +GTG   R R DER
Sbjct: 733 GSRALVTRRGDLTIEIGTGAAARPRVDER 761


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 881,118
Number of Sequences: 2352
Number of extensions: 19212
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)