Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021861
         (841 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001687-1|AAN71442.1|  852|Drosophila melanogaster RE58243p pro...    51   2e-06
AE014134-593|AAS64619.1|  824|Drosophila melanogaster CG3304-PB,...    51   2e-06
AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,...    51   2e-06
AE014134-591|AAF51119.3| 1104|Drosophila melanogaster CG3304-PA,...    51   2e-06
AY128421-1|AAM75014.1|  270|Drosophila melanogaster GH14660p pro...    33   0.64 
AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA...    33   0.64 
AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA...    31   2.6  
AE014134-1060|AAF52350.2| 1767|Drosophila melanogaster CG13991-P...    30   3.4  
BT016153-1|AAV37038.1| 1767|Drosophila melanogaster AT16405p pro...    30   4.5  
AE013599-2061|AAF58135.2|  765|Drosophila melanogaster CG8179-PA...    30   4.5  
AY070574-1|AAL48045.1|  328|Drosophila melanogaster RE11768p pro...    29   7.9  
AE014297-4001|AAF56629.1|  328|Drosophila melanogaster CG5491-PA...    29   7.9  

>BT001687-1|AAN71442.1|  852|Drosophila melanogaster RE58243p
           protein.
          Length = 852

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 20/53 (37%), Positives = 35/53 (66%)
 Frame = +1

Query: 601 LYITKNYFAFYSNVFGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERH 759
           LY+++NY  F++N+F + T + I    V  ITKEK A +IPNA+ + +  +++
Sbjct: 393 LYVSQNYVCFHANIFSWETHVSIKWKDVTAITKEKTALVIPNAISISSGKDKY 445


>AE014134-593|AAS64619.1|  824|Drosophila melanogaster CG3304-PB,
           isoform B protein.
          Length = 824

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 20/53 (37%), Positives = 35/53 (66%)
 Frame = +1

Query: 601 LYITKNYFAFYSNVFGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERH 759
           LY+++NY  F++N+F + T + I    V  ITKEK A +IPNA+ + +  +++
Sbjct: 370 LYVSQNYVCFHANIFSWETHVSIKWKDVTAITKEKTALVIPNAISISSGKDKY 422


>AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,
           isoform C protein.
          Length = 1205

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 20/53 (37%), Positives = 35/53 (66%)
 Frame = +1

Query: 601 LYITKNYFAFYSNVFGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERH 759
           LY+++NY  F++N+F + T + I    V  ITKEK A +IPNA+ + +  +++
Sbjct: 370 LYVSQNYVCFHANIFSWETHVSIKWKDVTAITKEKTALVIPNAISISSGKDKY 422


>AE014134-591|AAF51119.3| 1104|Drosophila melanogaster CG3304-PA,
           isoform A protein.
          Length = 1104

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 20/53 (37%), Positives = 35/53 (66%)
 Frame = +1

Query: 601 LYITKNYFAFYSNVFGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERH 759
           LY+++NY  F++N+F + T + I    V  ITKEK A +IPNA+ + +  +++
Sbjct: 370 LYVSQNYVCFHANIFSWETHVSIKWKDVTAITKEKTALVIPNAISISSGKDKY 422


>AY128421-1|AAM75014.1|  270|Drosophila melanogaster GH14660p
           protein.
          Length = 270

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 471 ERQQTAKQGAAEEFQRHFPQSDQRRRCSI 557
           E+Q+T +Q  A + Q+H PQS Q R C++
Sbjct: 89  EQQETQQQQQAPQEQQHSPQSPQTRNCNV 117


>AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA
            protein.
          Length = 1998

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 471  ERQQTAKQGAAEEFQRHFPQSDQRRRCSI 557
            E+Q+T +Q  A + Q+H PQS Q R C++
Sbjct: 1097 EQQETQQQQQAPQEQQHSPQSPQTRNCNV 1125


>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
            protein.
          Length = 2112

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 13/43 (30%), Positives = 16/43 (37%)
 Frame = -1

Query: 316  TRHPPRPMRNCRLTKSF*WSMSFCRLLATCIRNDRKSITQAPF 188
            T   P P   C++   F    S C     C+ NDR      PF
Sbjct: 1148 TSSKPNPSETCKVNGQFIGDRSDCAKFYRCVDNDRGGFNMVPF 1190


>AE014134-1060|AAF52350.2| 1767|Drosophila melanogaster CG13991-PA
           protein.
          Length = 1767

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
 Frame = +2

Query: 11  ECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSSGGRFPEVK 190
           E PD N  RT+LH +    +V +     D      S   +G+ T K LR S        K
Sbjct: 100 EFPDVNVKRTELHKRDECGKVVIRARGRDFESSSNSHFRDGIETVK-LRKSVCSTTSTAK 158

Query: 191 RSLSD---RFSVISDASSKKP 244
           +S SD       I ++S K+P
Sbjct: 159 KSQSDSGQNGGSIRESSEKEP 179


>BT016153-1|AAV37038.1| 1767|Drosophila melanogaster AT16405p
           protein.
          Length = 1767

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
 Frame = +2

Query: 11  ECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSSGGRFPEVK 190
           E PD N  RT+LH +    +V +     D      S   +G+ T K LR S        K
Sbjct: 100 EFPDVNVKRTELHKRDECGKVVIRARGRDFESSSNSHFRDGIETVK-LRKSVCSTTSMAK 158

Query: 191 RSLSD---RFSVISDASSKKP 244
           +S SD       I ++S K+P
Sbjct: 159 KSQSDSGQNGGSIRESSEKEP 179


>AE013599-2061|AAF58135.2|  765|Drosophila melanogaster CG8179-PA
           protein.
          Length = 765

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 35  RTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSL 154
           R ++HS    K V++      QP++L  ++ E L+  KSL
Sbjct: 509 RRNMHSSLKVKNVNVRCYNNGQPIDLHDREHERLMIKKSL 548


>AY070574-1|AAL48045.1|  328|Drosophila melanogaster RE11768p
           protein.
          Length = 328

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +2

Query: 26  NKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSSGGRFPEVKRSLSD 205
           NKP +   +  SA  V+  +  AD+P+ L SK    + + +S   SS    P  +   S 
Sbjct: 184 NKPTSSGRTTSSAAAVTPTVFIADEPMPLTSKAKSSVASSRSSN-SSNSSSPFYRPEPSS 242

Query: 206 RFSVISDASSK 238
             +  S +SSK
Sbjct: 243 STNASSSSSSK 253


>AE014297-4001|AAF56629.1|  328|Drosophila melanogaster CG5491-PA
           protein.
          Length = 328

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +2

Query: 26  NKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSSGGRFPEVKRSLSD 205
           NKP +   +  SA  V+  +  AD+P+ L SK    + + +S   SS    P  +   S 
Sbjct: 184 NKPTSSGRTTSSAAAVTPTVFIADEPMPLTSKAKSSVASSRSSN-SSNSSSPFYRPEPSS 242

Query: 206 RFSVISDASSK 238
             +  S +SSK
Sbjct: 243 STNASSSSSSK 253


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,542,548
Number of Sequences: 53049
Number of extensions: 821824
Number of successful extensions: 2463
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2463
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)