Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021861
         (841 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000194-5|AAK39377.2|  616|Caenorhabditis elegans Hypothetical ...    38   0.007
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr...    31   1.0  
AL031621-5|CAA20930.1|  437|Caenorhabditis elegans Hypothetical ...    29   4.1  
U41034-7|AAN72427.1|  465|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U41034-6|AAU05557.1|  538|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U41034-5|AAA82381.1|  567|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>AF000194-5|AAK39377.2|  616|Caenorhabditis elegans Hypothetical
           protein ZC328.3a protein.
          Length = 616

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +1

Query: 562 FVCTCRRSPPAS-HLYITKNYFAFYSNVFGYVTKLLIPTTSVLRITKEKVARIIPNAVGV 738
           + C  +R   A   ++I++    FY+N+ G+ T L+IP   +  + K K A I PN++ +
Sbjct: 96  YSCAYQREILAQGRMFISQFNVCFYANIIGWETTLVIPMKEISLVKKMKAAFIFPNSIQI 155


>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
           protein C50F2.2 protein.
          Length = 1029

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 346 PLQLEPHPR-SAKHEKQAVKPLSGSAPSVRVSALGSVSGNDETKDSKQPSKAR 501
           P+ + PHPR SA    ++ KP++      +       S  +   +SKQPS+ +
Sbjct: 273 PVDITPHPRPSASRNSESQKPVASKIQEKKTEVRTKSSPTNPIVNSKQPSQKK 325


>AL031621-5|CAA20930.1|  437|Caenorhabditis elegans Hypothetical
           protein F28H6.3 protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +1

Query: 691 ITKEKVARIIPNAVGVCTRDERHVSGRYSR 780
           + +EK   +IP ++   ++D++H+SGR+ R
Sbjct: 374 LCREKKLAVIPFSIFFSSKDQKHLSGRFVR 403


>U41034-7|AAN72427.1|  465|Caenorhabditis elegans Hypothetical
           protein M02D8.4b protein.
          Length = 465

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 364 HPRSAKHEKQAVKPLSGSAPSVRVSALGSVSGNDETKDSK 483
           H R A  +   V+PL G+AP+ +V   G +  + E +D++
Sbjct: 52  HERLAIMDLGVVQPLQGTAPNRQVIHNGEIYNHQELRDTE 91


>U41034-6|AAU05557.1|  538|Caenorhabditis elegans Hypothetical
           protein M02D8.4c protein.
          Length = 538

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 364 HPRSAKHEKQAVKPLSGSAPSVRVSALGSVSGNDETKDSK 483
           H R A  +   V+PL G+AP+ +V   G +  + E +D++
Sbjct: 52  HERLAIMDLGVVQPLQGTAPNRQVIHNGEIYNHQELRDTE 91


>U41034-5|AAA82381.1|  567|Caenorhabditis elegans Hypothetical
           protein M02D8.4a protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 364 HPRSAKHEKQAVKPLSGSAPSVRVSALGSVSGNDETKDSK 483
           H R A  +   V+PL G+AP+ +V   G +  + E +D++
Sbjct: 52  HERLAIMDLGVVQPLQGTAPNRQVIHNGEIYNHQELRDTE 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,358,887
Number of Sequences: 27780
Number of extensions: 400347
Number of successful extensions: 1338
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)