Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021859
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    41   5e-05
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    41   5e-05
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    41   5e-05
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    27   0.66 
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    27   0.66 
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   2.0  

>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 40.7 bits (91), Expect = 5e-05
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
 Frame = +1

Query: 256 TAVVPLDLVKCRLQVDA--------EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 411
           TAV P++ VK  LQV A        ++YK +V+ F    +E+G+    +G     I Y  
Sbjct: 26  TAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFP 85

Query: 412 QGLCKFGFYEVFKVAYAGMLDDETAYTYRTFV 507
                F F +V+K  + G +D  T + +R F+
Sbjct: 86  TQALNFAFKDVYKQVFLGGVDKNTQF-WRYFL 116


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 40.7 bits (91), Expect = 5e-05
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
 Frame = +1

Query: 256 TAVVPLDLVKCRLQVDA--------EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 411
           TAV P++ VK  LQV A        ++YK +V+ F    +E+G+    +G     I Y  
Sbjct: 26  TAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFP 85

Query: 412 QGLCKFGFYEVFKVAYAGMLDDETAYTYRTFV 507
                F F +V+K  + G +D  T + +R F+
Sbjct: 86  TQALNFAFKDVYKQVFLGGVDKNTQF-WRYFL 116


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 40.7 bits (91), Expect = 5e-05
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
 Frame = +1

Query: 256 TAVVPLDLVKCRLQVDA--------EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 411
           TAV P++ VK  LQV A        ++YK +V+ F    +E+G+    +G     I Y  
Sbjct: 26  TAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFP 85

Query: 412 QGLCKFGFYEVFKVAYAGMLDDETAYTYRTFV 507
                F F +V+K  + G +D  T + +R F+
Sbjct: 86  TQALNFAFKDVYKQVFLGGVDKNTQF-WRYFL 116


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 713 SSSCTGSVCPRAAPGPCRTCRN 648
           SSSC  S+ PR  P  C  CRN
Sbjct: 26  SSSCNNSLNPRTPPN-CARCRN 46


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 713 SSSCTGSVCPRAAPGPCRTCRN 648
           SSSC  S+ PR  P  C  CRN
Sbjct: 26  SSSCNNSLNPRTPPN-CARCRN 46


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 758 TYWYSSSRCVRSKQTSSSCTGS 693
           +YWYS  R VR    SSS  G+
Sbjct: 192 SYWYSDHRYVRFSVDSSSVLGN 213


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 821,239
Number of Sequences: 2352
Number of extensions: 17897
Number of successful extensions: 79
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)