Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021858
(801 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 87 2e-17
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 67 2e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 57 2e-08
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 57 2e-08
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 50 2e-06
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 50 3e-06
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 48 9e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 46 4e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 42 4e-04
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 40 0.002
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 40 0.003
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 37 0.022
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 37 0.022
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 36 0.051
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 36 0.051
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 35 0.088
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 33 0.27
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 33 0.36
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_29985| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 2.5
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 29 3.3
SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006) 28 7.7
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 87.0 bits (206), Expect = 2e-17
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +1
Query: 541 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 720
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +3
Query: 303 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 470
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
Score = 35.5 bits (78), Expect = 0.051
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 719 KREQARDLEKGSRNSIATPGRLIDFLE 799
K Q R+LE+G IATPGRLID LE
Sbjct: 172 KGPQIRELERGVEICIATPGRLIDMLE 198
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/79 (51%), Positives = 50/79 (63%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 562 KTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHV 621
Query: 694 TCVFGGAPKKRASPGLGEG 750
VFGG K S L EG
Sbjct: 622 VAVFGGGNKYEQSKALQEG 640
Score = 75.4 bits (177), Expect = 5e-14
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = +3
Query: 255 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 434
+PFNKNFY+ HP + K+S E+++ R + VSG P F F + + ++
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 435 MGYKEPTPIQAQGWPIAMSGKNLVG 509
+ Y +PT IQ Q PIA+SG++++G
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDIIG 559
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +2
Query: 719 KREQARDLEKGSRNSIATPGRLIDFLE 799
K EQ++ L++G+ +ATPGRLID ++
Sbjct: 630 KYEQSKALQEGAEIVVATPGRLIDHVK 656
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 681
+TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ FG
Sbjct: 146 ETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPL 205
Query: 682 YVRNTCVFGGAPK 720
+R V GGA +
Sbjct: 206 GIRTVSVIGGADR 218
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/61 (34%), Positives = 38/61 (62%)
Frame = +3
Query: 327 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 507 G 509
G
Sbjct: 143 G 143
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 431
QPF K+FY P + K +P E +E+R + E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 432 TMGYKEPTPIQAQGWPIAMSGKNLV 506
Y++PTPIQAQ P+ MSG++++
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMI 146
Score = 41.5 bits (93), Expect = 8e-04
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +1
Query: 529 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 708
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 709 G 711
G
Sbjct: 181 G 181
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 725 EQARDLEKGSRNSIATPGRLIDFL 796
EQ +L++G+ + TPGR+ID L
Sbjct: 186 EQIAELKRGAEIIVCTPGRMIDML 209
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +3
Query: 276 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 455
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 456 PIQAQGWPIAMSGKNLV 506
PIQ Q P+ +SG++++
Sbjct: 221 PIQMQVLPVLLSGRDVM 237
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 648
+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 117 ETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/83 (28%), Positives = 43/83 (51%)
Frame = +3
Query: 261 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 440
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 441 YKEPTPIQAQGWPIAMSGKNLVG 509
++ PTPIQ Q MSG++++G
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIG 114
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 52.4 bits (120), Expect = 4e-07
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
QTGSGKT AY+LP + + Q P+AL +APTRELA+QI A F + ++
Sbjct: 524 QTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKV 583
Query: 694 TCVFGG 711
+GG
Sbjct: 584 CVCYGG 589
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 351 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
VSG I F E F + + + GY+ PTP+Q PI M+G++L+
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLM 520
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 681
QTGSGKT A++LP + + N P A+ +APTRELA QI A F H +
Sbjct: 756 QTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGT 815
Query: 682 YVRNTCVFGG 711
+R +GG
Sbjct: 816 MLRPVVCYGG 825
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 342 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVM 752
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 698 VCLVVLLKREQARDLEKGSRNSIATPGRLIDFLE 799
VC + Q R L+ G + TPGRL DF+E
Sbjct: 821 VCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDFIE 854
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 315 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 482
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 483 AMSGKNLVGY 512
G G+
Sbjct: 197 MAHGPKKSGF 206
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 690
+TG+GKTL++ LP + + + + +RG P LV+APTRELA+Q+ + S +
Sbjct: 118 RTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENL--KSNLE 175
Query: 691 NTCVFGGAPKKRASPGLGEG 750
C++GG P + + G
Sbjct: 176 VYCIYGGMPYEPQENAINSG 195
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSYVR 690
Q+G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V G +V+
Sbjct: 130 QSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHVK 189
Query: 691 NTCVFGGAPKKRASPGLGEG 750
GG + L EG
Sbjct: 190 CHACIGGTNVREDRMKLEEG 209
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 48.0 bits (109), Expect = 9e-06
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHT 678
QTGSGKTLAY+ P +VH + R G P A ++ P RELA QI + A H
Sbjct: 423 QTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHH 481
Query: 679 SYVRNTCVFGGAPKK 723
+ R+ + GG +K
Sbjct: 482 ARFRSVGLIGGRKQK 496
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 46.0 bits (104), Expect = 4e-05
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+TGSGKTLA+++P I + Q DG ALV++PTRELA Q +V G+ +
Sbjct: 95 KTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSA 153
Query: 694 TCVFGGAPKK 723
+ GG K
Sbjct: 154 GLIIGGKDLK 163
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 378 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 509
++ F + G+ G+ PT IQ QG P+A+SG++++G
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLG 92
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+TGSGKT A+++P + G AL+L+PTRELA Q Q+ + G + +++
Sbjct: 326 RTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELGRFTGLKS 382
Query: 694 TCVFGGAPKKRASPG 738
+ + GG A+PG
Sbjct: 383 SVILGG-DSVVATPG 396
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+TGSGKTLA+++P +V + + + +G ++++PTREL+ Q VA D
Sbjct: 617 KTGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTY 675
Query: 694 TCVFGGAPKKRASPGLGEG 750
+ GG +K + L +G
Sbjct: 676 GIIMGGVNRKAEAERLQKG 694
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 677 HLMFVTRVCLVVLLKREQARDLEKGSRNSIATPGRLIDFLE 799
H F + + + ++ +A L+KG IATPGRL+D L+
Sbjct: 670 HHNFTYGIIMGGVNRKAEAERLQKGVNLLIATPGRLLDHLQ 710
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/66 (40%), Positives = 37/66 (56%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
Q+G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+V G V+
Sbjct: 42 QSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALGDYMSVQC 96
Query: 694 TCVFGG 711
GG
Sbjct: 97 HACIGG 102
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 342 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVM 175
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+TGSGKT A+ LP + + + P G A+VL PTRELA QI G ++
Sbjct: 52 KTGSGKTAAFALPILQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLKE 106
Query: 694 TCVFGG 711
+ GG
Sbjct: 107 AVIVGG 112
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 16/87 (18%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQIQ 651
+TGSGKTLA+ +P I HI Q P +G +AL++APTRELA Q++
Sbjct: 176 ETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235
Query: 652 QVAADFGHTSYVRNTCVFGG--APKKR 726
+ V+ + GG APK++
Sbjct: 236 DHLVKAAKYTSVKVAAIVGGMAAPKQQ 262
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+TGSGKT A+ LP + + + P AL+L PTRELA QI + G V+
Sbjct: 9 ETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALGSGIGVKC 63
Query: 694 TCVFGG 711
+ GG
Sbjct: 64 AVIVGG 69
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 36.7 bits (81), Expect = 0.022
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+ G+GKT AY++P + + + ALVL PTRELA Q Q+ + G +
Sbjct: 92 KNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELGKHMGAQV 146
Query: 694 TCVFGGAPKK 723
GG K
Sbjct: 147 MVTTGGTSLK 156
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
FE+ + G+ G+ +P+PIQ + P+A++G++++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDIL 88
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 36.7 bits (81), Expect = 0.022
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+ G+GKT AY++P + + + ALVL PTRELA Q Q+ + G +
Sbjct: 92 KNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELGKHMGAQV 146
Query: 694 TCVFGGAPKK 723
GG K
Sbjct: 147 MVTTGGTSLK 156
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
FE+ + G+ G+ +P+PIQ + P+A++G++++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDIL 88
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 35.5 bits (78), Expect = 0.051
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +1
Query: 601 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 711
P ALVL+PTRELA QIQ+V G V+ GG
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGG 40
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 35.5 bits (78), Expect = 0.051
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYV 687
+Q+G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H ++
Sbjct: 149 SQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPHI 203
Query: 688 R 690
+
Sbjct: 204 K 204
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 339 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 491
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 34.7 bits (76), Expect = 0.088
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +1
Query: 511 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSYV 687
++TG+GK+L ++LP++ Q P RG G I ++ PTRELA Q + +V+ G S V
Sbjct: 204 SETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSIV 255
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 517 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 645
TG+GKT A++LP + + +P + LV+ PTRELA Q
Sbjct: 56 TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 420 QGVKTMGYKEPTPIQAQGWPIAMSGKNL 503
+ V +G+ PTPIQA P+A+ GK++
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDV 50
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +1
Query: 520 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 687
GSGK LAY+LP I I + +GP+ L+L + ++ V D +
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293
Query: 688 RNTCVFGGAPKK 723
R +FGG ++
Sbjct: 294 RVQMIFGGGAEE 305
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 378 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
I FE+ + + + V GYK+PTP+Q PI ++L+
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLM 916
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 728 QARDLEKGSRNSIATPGRLIDFLE 799
Q R+L++ +ATPGRL+D ++
Sbjct: 968 QLRELDRNCHLLVATPGRLVDMMD 991
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 363 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 476
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_29985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +2
Query: 425 CKDNGLQRTDAYSSSRLADSYVWKEFS--WVLKRV--PAKRWPTSCQPL 559
C D TD S +++ D +W+EF+ WVL RV P+ SC +
Sbjct: 125 CPDVMYYTTDYSSETKMRDKAIWREFATKWVLVRVALPSVTHSFSCSDI 173
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 273 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 413
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +1
Query: 511 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 690
TQT +L +P +HIN+ P R PI + + PT+ + I ++ D ++ +
Sbjct: 430 TQTTKPASLRVNVPLSLHINDSSPTRL-SFPITMDVHPTKTTSVTI-PISEDMQTSTIAK 487
Query: 691 NTCVFGGAPKKRAS 732
T F + K AS
Sbjct: 488 QTSSFPRSNDKEAS 501
>SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006)
Length = 1552
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 415 CNKV*RQWVTKNRRLFKLKAGR*LCLERI*LGTQTGSGK 531
CN+ R V K+RRL AGR L I T +GS K
Sbjct: 59 CNESGRMSVDKDRRLISTSAGRVTKLPPIGAPTSSGSNK 97
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,683,002
Number of Sequences: 59808
Number of extensions: 506875
Number of successful extensions: 1386
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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