Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021858
         (801 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    50   8e-08
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   1.2  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   3.6  
AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    24   6.3  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 50.0 bits (114), Expect = 8e-08
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
 Frame = +1

Query: 514 QTGSGKTLAYILPAIVHI-NNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 687
           QTGSGKT A++LP I H+ + +  +  R   P  +++APTRELA QI      F H + +
Sbjct: 219 QTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKL 278

Query: 688 RNTCVFGG 711
           +    +GG
Sbjct: 279 KVCVSYGG 286



 Score = 39.9 bits (89), Expect = 9e-05
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +3

Query: 342 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLM 215



 Score = 25.8 bits (54), Expect = 1.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 722 REQARDLEKGSRNSIATPGRLIDFLE 799
           + Q + +  G    +ATPGRL+DF++
Sbjct: 290 QHQLQLMRGGCHVLVATPGRLLDFID 315


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 95  TVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLE 214
           T++ +L+E   S +  LDL    +D  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
 Frame = -3

Query: 271  FLLKG*VKQNPNL---GDACSDLQRILF----SHQILQILQIYCH 158
            F+ KG ++ +PN    GDA  D++ +LF    S +I   +Q  CH
Sbjct: 926  FVEKGILEGSPNCPECGDAVEDVEHVLFHCPRSDRIRNEMQQRCH 970


>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = +3

Query: 450 PTPIQAQGWPIAMSGKNLVGYSNGFRQNVGLHLASHCAHKQPTAYSER 593
           P P +  GW ++ SG ++  +++  ++       S CA   P+    R
Sbjct: 49  PPPCRVPGWRLSTSGASIRMHASARKRAYCPRTRSACAETFPSTRRRR 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,658
Number of Sequences: 2352
Number of extensions: 16283
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)