Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021858
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 94 1e-19
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 75 6e-14
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 64 1e-10
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 57 2e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 57 2e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 57 2e-08
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 48 1e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 47 1e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 47 1e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 47 1e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 47 1e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 47 1e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 47 2e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 47 2e-05
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 47 2e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 46 4e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 43 3e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 43 3e-04
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 42 4e-04
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 42 4e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 40 0.002
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 40 0.003
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 40 0.003
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 39 0.005
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 39 0.005
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 38 0.008
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 37 0.015
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 36 0.045
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 33 0.24
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.31
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 33 0.31
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.73
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.96
AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (... 30 2.2
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 2.9
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 2.9
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical ... 29 3.9
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.9
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.9
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 29 5.1
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 6.8
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 8.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++
Sbjct: 174 KTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKM 233
Query: 694 TCVFGGAPKKRASPGLGEG 750
TC+FGGA K + L G
Sbjct: 234 TCLFGGASKGPQARDLERG 252
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/83 (33%), Positives = 51/83 (61%)
Frame = +3
Query: 258 PFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 437
P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 89 PIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-LLYG 147
Query: 438 GYKEPTPIQAQGWPIAMSGKNLV 506
+++PT IQ+ WPIAMSG++++
Sbjct: 148 KFQKPTVIQSISWPIAMSGRDII 170
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2
Query: 719 KREQARDLEKGSRNSIATPGRLIDFLE 799
K QARDLE+G +ATPGRL+DFL+
Sbjct: 242 KGPQARDLERGVDIVVATPGRLLDFLD 268
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 77.4 bits (182), Expect = 1e-14
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 310 KTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINP 369
Query: 694 TCVFGGAPK 720
C +GG K
Sbjct: 370 ICAYGGGSK 378
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = +3
Query: 255 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 434
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 435 MGYKEPTPIQAQGWPIAMSGKNLVG 509
Y++PTPIQA P A+SG++++G
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLG 307
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 74.9 bits (176), Expect = 6e-14
Identities = 34/66 (51%), Positives = 45/66 (68%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F ++
Sbjct: 349 KTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKV 408
Query: 694 TCVFGG 711
C +GG
Sbjct: 409 ACTYGG 414
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 FTQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQG 425
+ + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 259 YYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNV 318
Query: 426 VKTMGYKEPTPIQAQGWPIAMSGKNLVG 509
+K Y +PT IQAQ P MSG++++G
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIG 346
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 725 EQARDLEKGSRNSIATPGRLIDFL 796
EQ DL++G+ + TPGR+ID L
Sbjct: 419 EQIADLKRGAEIVVCTPGRMIDVL 442
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 681
+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLL 405
Query: 682 YVRNTCVFGGAPKK 723
++ V GGA ++
Sbjct: 406 GIKTVSVIGGASRE 419
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +3
Query: 327 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 507 G 509
G
Sbjct: 343 G 343
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 719 KREQARDLEKGSRNSIATPGRLIDFLE 799
+ +Q L G IATPGRL+D LE
Sbjct: 418 REDQGMKLRMGVEVVIATPGRLLDVLE 444
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +1
Query: 511 TQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFG 672
+QTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ +
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS 187
Query: 673 HTSYVRNTCVFGGAPK 720
+ Y ++ C++GG +
Sbjct: 188 YNGY-KSVCLYGGGSR 202
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Frame = +3
Query: 243 FCFTQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 401
F + +P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 402 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGYS 515
+ G ++ G+++P+PIQ+Q WP+ +SG++ +G S
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVS 128
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 56.8 bits (131), Expect = 2e-08
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAA 663
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 243
Query: 664 DFGHTSYVRNTCVFGGAPKKR 726
F + S ++ ++GG R
Sbjct: 244 KFSYKSNIQTAILYGGRENYR 264
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 336 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLM 180
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 722 REQARDLEKGSRNSIATPGRLIDFLE 799
R+Q L G+ IATPGRLID +E
Sbjct: 264 RDQVNRLRAGTHILIATPGRLIDIIE 289
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 56.8 bits (131), Expect = 2e-08
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAA 663
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 227
Query: 664 DFGHTSYVRNTCVFGGAPKKR 726
F + S ++ ++GG R
Sbjct: 228 KFSYKSNIQTAILYGGRENYR 248
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 336 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLM 164
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 722 REQARDLEKGSRNSIATPGRLIDFLE 799
R+Q L G+ IATPGRLID +E
Sbjct: 248 RDQVNRLRAGTHILIATPGRLIDIIE 273
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 56.8 bits (131), Expect = 2e-08
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAA 663
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 224
Query: 664 DFGHTSYVRNTCVFGGAPKKR 726
F + S ++ ++GG R
Sbjct: 225 KFSYKSNIQTAILYGGRENYR 245
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 336 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLM 161
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 722 REQARDLEKGSRNSIATPGRLIDFLE 799
R+Q L G+ IATPGRLID +E
Sbjct: 245 RDQVNRLRAGTHILIATPGRLIDIIE 270
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +1
Query: 517 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 648
TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI
Sbjct: 236 TGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 282 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 458
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 459 IQAQGWPIAMSGKNLVGYSN 518
IQ QG P+A+SG++++G ++
Sbjct: 216 IQIQGIPVALSGRDMIGIAS 235
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 725 EQARDLEKGSRNSIATPGRLIDFL 796
EQA+D+ G +ATPGRL D L
Sbjct: 314 EQAKDVRDGIHIVVATPGRLSDML 337
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 681
QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F + +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 682 YVRNTCVFGG 711
+ V+GG
Sbjct: 446 MMEIKPVYGG 455
Score = 34.7 bits (76), Expect = 0.078
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
P + F EAN + +Q+ V GY + TPIQ P+ G +++
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIM 382
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 681
QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F + +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 682 YVRNTCVFGG 711
+ V+GG
Sbjct: 446 MMEIKPVYGG 455
Score = 34.7 bits (76), Expect = 0.078
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
P + F EAN + +Q+ V GY + TPIQ P+ G +++
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIM 382
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTS 681
QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F + S
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Query: 682 YVRNTCVFGG 711
+ V+GG
Sbjct: 403 VMEIKPVYGG 412
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
P + F +++ P +++ V+ GY TPIQ P+ GK+++
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDIL 339
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTS 681
QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F + S
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Query: 682 YVRNTCVFGG 711
+ V+GG
Sbjct: 403 VMEIKPVYGG 412
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
P + F +++ P +++ V+ GY TPIQ P+ GK+++
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDIL 339
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 681
QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F + +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 682 YVRNTCVFGG 711
+ V+GG
Sbjct: 446 MMEIKPVYGG 455
Score = 34.7 bits (76), Expect = 0.078
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
P + F EAN + +Q+ V GY + TPIQ P+ G +++
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIM 382
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 681
QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F + +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 682 YVRNTCVFGG 711
+ V+GG
Sbjct: 657 MMEIRPVYGG 666
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
F EAN + +++ V GY + TPIQ P+ G +++
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIM 593
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 681
QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F + +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 682 YVRNTCVFGG 711
+ V+GG
Sbjct: 657 MMEIRPVYGG 666
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
F EAN + +++ V GY + TPIQ P+ G +++
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIM 593
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +1
Query: 511 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 690
++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 691 NTCVFGG 711
C+ GG
Sbjct: 124 CACLVGG 130
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 369 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGYS 515
H +++ V + ++ G+ +PTPIQ + P M GK++V S
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMS 68
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +1
Query: 511 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 690
++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 691 NTCVFGG 711
C+ GG
Sbjct: 124 CACLVGG 130
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 369 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGYS 515
H +++ V + ++ G+ +PTPIQ + P M GK++V S
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMS 68
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 681
QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F + +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 682 YVRNTCVFGG 711
+ V+GG
Sbjct: 657 MMEIRPVYGG 666
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
F EAN + +++ V GY + TPIQ P+ G +++
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIM 593
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 678
+T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI + +
Sbjct: 426 ETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQN 485
Query: 679 SYVRNTCVFGGAPKKRA 729
+ + +G + + R+
Sbjct: 486 TDIIVLLSYGQSDRARS 502
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/79 (32%), Positives = 46/79 (58%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++ S +
Sbjct: 113 KTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTY 171
Query: 694 TCVFGGAPKKRASPGLGEG 750
V GG+ + L +G
Sbjct: 172 GLVMGGSNRSAEKDKLAKG 190
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 345 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLM 207
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVA 660
QTGSGKT A+++P + I P R+ P ALVL+PTREL+ QI +
Sbjct: 211 QTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNES 270
Query: 661 ADFGHTSYVRNTCVFGG 711
F + + + + ++GG
Sbjct: 271 RKFAYRTPITSALLYGG 287
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = +1
Query: 484 LCLERI*LGTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 663
L L + + + TGSGKTLA++LP + I N G AL+L+P+REL QI V
Sbjct: 44 LNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQ 101
Query: 664 DFGHTSYVRNTCVFGG 711
F + V GG
Sbjct: 102 PFAEKLNLTVETVTGG 117
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G V
Sbjct: 74 QSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNI 128
Query: 694 TCVFGG 711
GG
Sbjct: 129 LPCIGG 134
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G V
Sbjct: 74 QSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNI 128
Query: 694 TCVFGG 711
GG
Sbjct: 129 LPCIGG 134
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Frame = +1
Query: 436 WVTKNRRLFKLKAGR*L---CLERI*LGT------QTGSGKTLAYILPAIVHINNQPPIR 588
W+T+ + ++K + C+ +I G+ +TG+GKTLA+ +P + ++ P
Sbjct: 99 WITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPY-- 156
Query: 589 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 711
G AL+L PTRELA QI + G ++ + + GG
Sbjct: 157 ---GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGG 194
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 689 VTRVCLVVLLKRE---QARDLEKGSRNSIATPGRLIDFLE 799
+T C V++ R QAR+L + +ATPGRL D +E
Sbjct: 184 ITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIE 223
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Frame = +1
Query: 436 WVTKNRRLFKLKAGR*L---CLERI*LGT------QTGSGKTLAYILPAIVHINNQPPIR 588
W+T+ + ++K + C+ +I G+ +TG+GKTLA+ +P + ++ P
Sbjct: 99 WITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPY-- 156
Query: 589 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 711
G AL+L PTRELA QI + G ++ + + GG
Sbjct: 157 ---GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGG 194
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 689 VTRVCLVVLLKRE---QARDLEKGSRNSIATPGRLIDFLE 799
+T C V++ R QAR+L + +ATPGRL D +E
Sbjct: 184 ITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIE 223
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 675
+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 34 ETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALIS 93
Query: 676 TSYVRNTCVFGG 711
T+ + T + GG
Sbjct: 94 TTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 675
+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 201 ETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALIS 260
Query: 676 TSYVRNTCVFGG 711
T+ + T + GG
Sbjct: 261 TTQLIATSIVGG 272
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 657
+TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 134 RTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +1
Query: 517 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 681
TGSGKTLA+++P ++ + ++ P L++APTREL Q A + +
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYET 841
Query: 682 YVRNTCVFGG 711
++ FGG
Sbjct: 842 GLKCGLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +1
Query: 517 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 681
TGSGKTLA+++P ++ + ++ P L++APTREL Q A + +
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYET 841
Query: 682 YVRNTCVFGG 711
++ FGG
Sbjct: 842 GLKCGLAFGG 851
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V+
Sbjct: 71 QSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQC 125
Query: 694 TCVFGG 711
GG
Sbjct: 126 HACIGG 131
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V+
Sbjct: 71 QSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQC 125
Query: 694 TCVFGG 711
GG
Sbjct: 126 HACIGG 131
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 517 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 657
TG+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 194 TGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
Score = 35.5 bits (78), Expect = 0.045
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 503
FE+ N + + GY +PTPIQ P+A++GK++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDI 188
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
+ G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ + ++
Sbjct: 88 KNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVELSKHIQLKV 142
Query: 694 TCVFGG 711
GG
Sbjct: 143 MVTTGG 148
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 35.5 bits (78), Expect = 0.045
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
+TGSGKT A+ +P + + + P LVL PTRELA QI Q
Sbjct: 89 ETGSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQ 130
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 517 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 645
TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 672
Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 256 QSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 672
Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 281 QSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 672
Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 665 QSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.7 bits (71), Expect = 0.31
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +1
Query: 505 LGTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 684
+ TGSGKT+ Y+LP + + ++P A++L P + L QI + S
Sbjct: 161 IAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVDEFKRWNDESG 216
Query: 685 VRNTCVFGGA 714
V GA
Sbjct: 217 VAKVVSLSGA 226
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 645
+TGSGKTLA ++P ++ + G AL+++PTRELA Q
Sbjct: 121 KTGSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELALQ 163
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.73
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 517 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 648
TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 89 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKN 205
+ETV+ LE N +RL+ A VA E LE + GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (grd
related) protein13 protein.
Length = 273
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 249 FTQPFNK-NFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQ 383
+TQP++ +F P PT++++ PY Y H + + + HN Q
Sbjct: 61 YTQPYSPVSFRPPPPTIIQQQPY----YSVPHPIPIQTQQFHNSYQ 102
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/70 (25%), Positives = 37/70 (52%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T R
Sbjct: 67 KSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ART 120
Query: 694 TCVFGGAPKK 723
+ GG+ K
Sbjct: 121 SVYVGGSAHK 130
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/70 (25%), Positives = 37/70 (52%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 693
++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T R
Sbjct: 67 KSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ART 120
Query: 694 TCVFGGAPKK 723
+ GG+ K
Sbjct: 121 SVYVGGSAHK 130
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 517 TGSGKTLAYILPAIVH 564
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical
protein C17A2.1 protein.
Length = 331
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = +3
Query: 285 HPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 464
H + R+ +V ++ N + T+ +H + +E A F + +K + I
Sbjct: 213 HNKEISRTDKKVMKFINQVKSTLGTALIHLKLNIYEFAAFKSFCIWNIKFHKTSQTMRIV 272
Query: 465 AQGWPIAMSGKNLVGYSN 518
AQG +A+S V Y N
Sbjct: 273 AQGHYVAVSSALRVYYKN 290
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 500 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 321
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 320 D 318
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 500 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 321
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 320 D 318
+
Sbjct: 86 N 86
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 736 PGLLSF*EHHQTHTCYEHKMCVQNLQQLAEFVVL 635
PGL+ +HH +HT +H +C+Q + A VL
Sbjct: 21 PGLI-LGDHHISHTINQHHLCIQKKRLKAGTTVL 53
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 141 RIIAEFVASSKFGTTVSTAIIPV 73
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 141 RIIAEFVASSKFGTTVSTAIIPV 73
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -2
Query: 491 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDFI 312
R S+RP + +R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 311 W*SFENCRMWIIKVF 267
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 217 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 116
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,520,244
Number of Sequences: 27780
Number of extensions: 383588
Number of successful extensions: 1197
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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