Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021857
(831 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 161 4e-40
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 159 3e-39
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 159 3e-39
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 158 4e-39
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 157 6e-39
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 157 8e-39
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 156 1e-38
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 155 3e-38
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 155 3e-38
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 81 9e-16
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 81 9e-16
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 80 2e-15
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 80 2e-15
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 80 2e-15
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 79 4e-15
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 79 4e-15
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 64 8e-11
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 64 8e-11
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 35 0.058
At4g37190.1 68417.m05265 expressed protein 31 0.71
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.9
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 29 3.8
At2g28400.1 68415.m03451 expressed protein contains Pfam profile... 29 5.0
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 161 bits (392), Expect = 4e-40
Identities = 87/170 (51%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKY-QTLSSNHTMR 611
CDCLQGFQ + + P P PK T+ +
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNAT 186
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMSG 761
LS LY L +PT+GDLNHL+S TMSG
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTL-KLANPTFGDLNHLISATMSG 235
Score = 125 bits (302), Expect = 3e-29
Identities = 58/69 (84%), Positives = 62/69 (89%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 152 ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211
Query: 689 FRTLKLSTP 715
FRTLKL+ P
Sbjct: 212 FRTLKLANP 220
Score = 121 bits (292), Expect = 5e-28
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 237
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 238 PRAILVTWSP 267
PRA+L+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 760 VHTCLRFPGQLNGDLRKLAVNMVP 831
V CLRFPGQLN DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 159 bits (385), Expect = 3e-39
Identities = 86/170 (50%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKY-QTLSSNHTMR 611
CDCLQGFQ + + P P PK T+ +
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMSG 761
LS LY L P++GDLNHL+S TMSG
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTL-KLTTPSFGDLNHLISATMSG 235
Score = 127 bits (306), Expect = 1e-29
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211
Query: 689 FRTLKLSTP 715
FRTLKL+TP
Sbjct: 212 FRTLKLTTP 220
Score = 118 bits (285), Expect = 4e-27
Identities = 49/70 (70%), Positives = 60/70 (85%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 237
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 238 PRAILVTWSP 267
PRA+L+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 760 VHTCLRFPGQLNGDLRKLAVNMVP 831
V CLRFPGQLN DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 159 bits (385), Expect = 3e-39
Identities = 86/170 (50%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKY-QTLSSNHTMR 611
CDCLQGFQ + + P P PK T+ +
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNAT 186
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMSG 761
LS LY L P++GDLNHL+S TMSG
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTL-KLSTPSFGDLNHLISATMSG 235
Score = 128 bits (310), Expect = 3e-30
Identities = 60/69 (86%), Positives = 63/69 (91%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 152 ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211
Query: 689 FRTLKLSTP 715
FRTLKLSTP
Sbjct: 212 FRTLKLSTP 220
Score = 119 bits (286), Expect = 3e-27
Identities = 50/70 (71%), Positives = 61/70 (87%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 237
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 238 PRAILVTWSP 267
PRA+L+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 760 VHTCLRFPGQLNGDLRKLAVNMVP 831
V CLRFPGQLN DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 158 bits (384), Expect = 4e-39
Identities = 85/170 (50%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+
Sbjct: 68 DLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 127
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKY-QTLSSNHTMR 611
CDCLQGFQ + + P P PK T+ +
Sbjct: 128 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 187
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMSG 761
LS LY L P++GDLNHL+S TMSG
Sbjct: 188 LSVHQLVENADECMVLDNEALYDICFRTL-KLSTPSFGDLNHLISATMSG 236
Score = 128 bits (309), Expect = 4e-30
Identities = 60/69 (86%), Positives = 63/69 (91%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 153 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 212
Query: 689 FRTLKLSTP 715
FRTLKLSTP
Sbjct: 213 FRTLKLSTP 221
Score = 123 bits (297), Expect = 1e-28
Identities = 54/71 (76%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 234
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 235 VPRAILVTWSP 267
VPRA+L+ P
Sbjct: 61 VPRAVLMDLEP 71
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/23 (82%), Positives = 21/23 (91%), Gaps = 1/23 (4%)
Frame = +1
Query: 766 TC-LRFPGQLNGDLRKLAVNMVP 831
TC LRFPGQLN DLRKLAVN++P
Sbjct: 238 TCSLRFPGQLNSDLRKLAVNLIP 260
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 157 bits (382), Expect = 6e-39
Identities = 86/170 (50%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKY-QTLSSNHTMR 611
DCLQGFQ + + P P PK T+ +
Sbjct: 127 SDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNAT 186
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMSG 761
LS LY L +PT+GDLNHL+S TMSG
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTL-KLANPTFGDLNHLISATMSG 235
Score = 125 bits (302), Expect = 3e-29
Identities = 58/69 (84%), Positives = 62/69 (89%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 152 ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211
Query: 689 FRTLKLSTP 715
FRTLKL+ P
Sbjct: 212 FRTLKLANP 220
Score = 124 bits (298), Expect = 1e-28
Identities = 54/70 (77%), Positives = 61/70 (87%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 237
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 238 PRAILVTWSP 267
PRA+L+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 760 VHTCLRFPGQLNGDLRKLAVNMVP 831
V CLRFPGQLN DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 157 bits (381), Expect = 8e-39
Identities = 84/170 (49%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+
Sbjct: 68 DLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 127
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKY-QTLSSNHTMR 611
CDCLQGFQ + + P P PK T+ +
Sbjct: 128 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 187
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMSG 761
LS LY L P++GDLNHL+S TMSG
Sbjct: 188 LSVHQLVENADECMVLDNEALYDICFRTL-KLSTPSFGDLNHLISATMSG 236
Score = 128 bits (309), Expect = 4e-30
Identities = 60/69 (86%), Positives = 63/69 (91%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 153 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 212
Query: 689 FRTLKLSTP 715
FRTLKLSTP
Sbjct: 213 FRTLKLSTP 221
Score = 128 bits (308), Expect = 6e-30
Identities = 55/71 (77%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 234
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 235 VPRAILVTWSP 267
VPRA+L+ P
Sbjct: 61 VPRAVLMDLEP 71
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/23 (82%), Positives = 21/23 (91%), Gaps = 1/23 (4%)
Frame = +1
Query: 766 TC-LRFPGQLNGDLRKLAVNMVP 831
TC LRFPGQLN DLRKLAVN++P
Sbjct: 238 TCSLRFPGQLNSDLRKLAVNLIP 260
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 156 bits (379), Expect = 1e-38
Identities = 84/170 (49%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 126
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKY-QTLSSNHTMR 611
CDCLQGFQ + + P P PK T+ +
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMSG 761
LS LY L P++GDLNHL+S TMSG
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTL-KLTTPSFGDLNHLISATMSG 235
Score = 127 bits (306), Expect = 1e-29
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211
Query: 689 FRTLKLSTP 715
FRTLKL+TP
Sbjct: 212 FRTLKLTTP 220
Score = 125 bits (302), Expect = 3e-29
Identities = 53/70 (75%), Positives = 62/70 (88%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 237
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 238 PRAILVTWSP 267
PRAIL+ P
Sbjct: 61 PRAILMDLEP 70
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 760 VHTCLRFPGQLNGDLRKLAVNMVP 831
V CLRFPGQLN DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 155 bits (377), Expect = 3e-38
Identities = 84/170 (49%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKY-QTLSSNHTMR 611
CDCLQGFQ + + P P PK T+ +
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMSG 761
LS LY L P++GDLNHL+S TMSG
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTL-KLTTPSFGDLNHLISATMSG 235
Score = 127 bits (306), Expect = 1e-29
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211
Query: 689 FRTLKLSTP 715
FRTLKL+TP
Sbjct: 212 FRTLKLTTP 220
Score = 124 bits (299), Expect = 7e-29
Identities = 53/70 (75%), Positives = 61/70 (87%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 237
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 238 PRAILVTWSP 267
PRA+L+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 760 VHTCLRFPGQLNGDLRKLAVNMVP 831
V CLRFPGQLN DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 155 bits (377), Expect = 3e-38
Identities = 84/170 (49%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKY-QTLSSNHTMR 611
CDCLQGFQ + + P P PK T+ +
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMSG 761
LS LY L P++GDLNHL+S TMSG
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTL-KLTTPSFGDLNHLISATMSG 235
Score = 127 bits (306), Expect = 1e-29
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211
Query: 689 FRTLKLSTP 715
FRTLKL+TP
Sbjct: 212 FRTLKLTTP 220
Score = 124 bits (299), Expect = 7e-29
Identities = 53/70 (75%), Positives = 61/70 (87%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 237
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 238 PRAILVTWSP 267
PRA+L+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 760 VHTCLRFPGQLNGDLRKLAVNMVP 831
V CLRFPGQLN DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 81.0 bits (191), Expect = 9e-16
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKYQT-LSSNHTMR 611
C LQGF +R +S P P+ T + +
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMS 758
LS + T +Y +L N PTY +LN LVS +S
Sbjct: 189 LSTHSLLEHTDVSILLDNEAIYDICRRSL-NIERPTYTNLNRLVSQVIS 236
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDIC 213
Query: 689 FRTLKLSTP 715
R+L + P
Sbjct: 214 RRSLNIERP 222
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 231
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 232 YVPRAILVTWSP 267
+VPRA+ V P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 81.0 bits (191), Expect = 9e-16
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKYQT-LSSNHTMR 611
C LQGF +R +S P P+ T + +
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMS 758
LS + T +Y +L N PTY +LN LVS +S
Sbjct: 189 LSTHSLLEHTDVSILLDNEAIYDICRRSL-NIERPTYTNLNRLVSQVIS 236
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDIC 213
Query: 689 FRTLKLSTP 715
R+L + P
Sbjct: 214 RRSLNIERP 222
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 231
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 232 YVPRAILVTWSP 267
+VPRA+ V P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 80.2 bits (189), Expect = 2e-15
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADN 128
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKYQT-LSSNHTMR 611
C LQGF +R +S P P+ T + +
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMS 758
LS + T +Y +L + PTY +LN L+S T+S
Sbjct: 189 LSTHSLLEHTDVVVLLDNEAIYDICRRSL-DIERPTYSNLNRLISQTIS 236
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +2
Query: 554 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTP 715
+++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + P
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERP 222
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 231
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 232 YVPRAILVTWSP 267
+VPRA+ + P
Sbjct: 61 HVPRAVFLDLEP 72
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 80.2 bits (189), Expect = 2e-15
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKYQT-LSSNHTMR 611
C LQGF +R +S P P+ T + +
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMS 758
LS + T +Y +LS PTY +LN LVS +S
Sbjct: 189 LSTHSLLEHTDVSILLDNEAIYDICRRSLS-IERPTYTNLNRLVSQVIS 236
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDIC 213
Query: 689 FRTLKLSTP 715
R+L + P
Sbjct: 214 RRSLSIERP 222
Score = 57.6 bits (133), Expect = 9e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 231
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 232 YVPRAILVTWSP 267
+VPRA+ V P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 80.2 bits (189), Expect = 2e-15
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 435 CDCLQGFQXXXXXXXXXXXXXXXXXXQRSVKSTPTES*THTQ*SPRPKYQT-LSSNHTMR 611
C LQGF +R +S P P+ T + +
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Query: 612 LSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPTYGDLNHLVSLTMS 758
LS + T +Y +LS PTY +LN LVS +S
Sbjct: 189 LSTHSLLEHTDVSILLDNEAIYDICRRSLS-IERPTYTNLNRLVSQVIS 236
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDIC 213
Query: 689 FRTLKLSTP 715
R+L + P
Sbjct: 214 RRSLSIERP 222
Score = 57.6 bits (133), Expect = 9e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 231
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 232 YVPRAILVTWSP 267
+VPRA+ V P
Sbjct: 61 HVPRAVFVDLEP 72
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 79.0 bits (186), Expect = 4e-15
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Query: 435 CDCLQGF 455
C LQGF
Sbjct: 129 CTGLQGF 135
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC
Sbjct: 154 LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
Query: 689 FRTLKLSTP 715
R+L + P
Sbjct: 214 RRSLDIERP 222
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 231
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 232 YVPRAILVTWSP 267
+VPRA+ V P
Sbjct: 61 HVPRAVFVDLEP 72
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 79.0 bits (186), Expect = 4e-15
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 434
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Query: 435 CDCLQGF 455
C LQGF
Sbjct: 129 CTGLQGF 135
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 688
+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC
Sbjct: 154 LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
Query: 689 FRTLKLSTP 715
R+L + P
Sbjct: 214 RRSLDIERP 222
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 231
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 232 YVPRAILVTWSP 267
+VPRA+ V P
Sbjct: 61 HVPRAVFVDLEP 72
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 64.5 bits (150), Expect = 8e-11
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +1
Query: 61 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 240
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 241 RAILVTWSP 267
RA+L+ P
Sbjct: 63 RALLIDLEP 71
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKES 428
DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E+
Sbjct: 68 DLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREA 126
Query: 429 ESCDCLQGF 455
+ D L+GF
Sbjct: 127 DGSDSLEGF 135
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 685
+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I
Sbjct: 154 LETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRI 213
Query: 686 CFRTLKLSTP 715
L L+ P
Sbjct: 214 AVERLHLTNP 223
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 64.5 bits (150), Expect = 8e-11
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +1
Query: 61 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 240
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 241 RAILVTWSP 267
RA+L+ P
Sbjct: 63 RALLIDLEP 71
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +3
Query: 255 DLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKES 428
DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E+
Sbjct: 68 DLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREA 126
Query: 429 ESCDCLQGF 455
+ D L+GF
Sbjct: 127 DGSDSLEGF 135
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 509 ISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 685
+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I
Sbjct: 154 LETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRI 213
Query: 686 CFRTLKLSTP 715
L L+ P
Sbjct: 214 AVERLHLTNP 223
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 35.1 bits (77), Expect = 0.058
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +2
Query: 581 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPHLR 724
S+ ++ P ++++ +LV D TY + + ++ D C R +K+ST LR
Sbjct: 77 SNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMSTRRLR 124
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.5 bits (68), Expect = 0.71
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 58 MREIVHLQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 225
MREIV +Q G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 226 GKYVPRAILVTWSPAPWTLSA 288
Y PR + V A T+S+
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 390 LVDSVLDVVRKESESCDCLQGF 455
+++SV VVRKE+E+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 106 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVT 258
G + W I+ + TG Y DL ER+++ +++A +Y P ++T
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVIT 95
>At2g28400.1 68415.m03451 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 162
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 57 NEGNRSSTGRPMW*PDWS*VLGDHLRRAR 143
++ ++++ P+ PDWS +LGD RR R
Sbjct: 68 SDSGKAASSLPVNVPDWSKILGDESRRQR 96
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,894,428
Number of Sequences: 28952
Number of extensions: 382076
Number of successful extensions: 1132
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1911862400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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