Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021856
         (805 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   6.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   6.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   6.3  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 724  ATVRYAQRVPAPRQKSQPKLRLP 792
            +T +++  +  P  K+ PKLRLP
Sbjct: 3034 STEQFSDFIVKPLSKASPKLRLP 3056


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 689 RPANDTQQHPGASRP-LST*SGRLARAAGESAPKRAQSKQ 573
           RP + +     +S P L T SG   RAAG S+  R  SKQ
Sbjct: 46  RPQHSSTSASSSSVPTLPTTSGE-PRAAGSSSNSRRNSKQ 84


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 689 RPANDTQQHPGASRP-LST*SGRLARAAGESAPKRAQSKQ 573
           RP + +     +S P L T SG   RAAG S+  R  SKQ
Sbjct: 46  RPQHSSTSASSSSVPTLPTTSGE-PRAAGSSSNSRRNSKQ 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,428
Number of Sequences: 2352
Number of extensions: 12691
Number of successful extensions: 113
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)