BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021856
(805 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094724-1|AAM11077.1| 788|Drosophila melanogaster GH21171p pro... 29 9.8
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA... 29 9.8
>AY094724-1|AAM11077.1| 788|Drosophila melanogaster GH21171p
protein.
Length = 788
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 466 CSDHGSNPSSLIHLKLVFSQTPRAVARLILRQ 371
C ++GS P+S HL LV S A A L Q
Sbjct: 230 CGNYGSGPNSAQHLPLVMSMPSAAAAAAHLMQ 261
>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
protein.
Length = 2759
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 466 CSDHGSNPSSLIHLKLVFSQTPRAVARLILRQ 371
C ++GS P+S HL LV S A A L Q
Sbjct: 2201 CGNYGSGPNSAQHLPLVMSMPSAAAAAAHLMQ 2232
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,914,547
Number of Sequences: 53049
Number of extensions: 528072
Number of successful extensions: 1693
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1693
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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