Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021855
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 397  PRYSVLLNMPIFGQSW 444
            PR  +++ MP++GQS+
Sbjct: 1632 PRRKIVMGMPLYGQSF 1647



 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 394 FPRYSVLLNMPIFGQSW 444
           FP+  ++L +P FG+S+
Sbjct: 408 FPKSKIVLGVPFFGRSF 424


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +2

Query: 53  WCI*KNFKVPWTARVRPTLRAHGRRSASRAWTP 151
           W I  +   P+TA   P L  +G  S  + + P
Sbjct: 244 WHITDSHSFPFTAESLPDLTKYGAYSPKKVYAP 276


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 397 PRYSVLLNMPIFGQSW 444
           P   ++L +P FG++W
Sbjct: 289 PSAKIVLGLPTFGRAW 304


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 375 FWSRVNIPKVLRAAEHAHL 431
           FWS + I ++ R A  AHL
Sbjct: 572 FWSLLRIYELARKAAFAHL 590


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,208
Number of Sequences: 336
Number of extensions: 3549
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)