Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021855
         (785 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    25   3.5  
AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase pr...    25   3.5  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   8.1  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 34  ARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFA 138
           A   +TL+H+ +     D   + +ST T  + C A
Sbjct: 32  APFPLTLIHINDLHARFDETNQKSSTCTNSKECIA 66


>AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase
           protein.
          Length = 98

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 34  ARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFA 138
           A   +TL+H+ +     D   + +ST T  + C A
Sbjct: 32  APFPLTLIHINDLHARFDETNQKSSTCTNSKECIA 66


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 570 YSSMFATLVIMSLKCPSRQASWDAASS*EQRCHTP 466
           YS  +  +V + +      ASW A ++  QR +TP
Sbjct: 538 YSGRYCAVVTLDVTNAFNSASWLAIANALQRINTP 572


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,967
Number of Sequences: 2352
Number of extensions: 16022
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)